RNA–Protein interactions for RNA: ENST00000488452.5

NELFA-215, Transcript of negative elongation factor complex member A, human

TSL 4

Gene NELFA, Length 560 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NELFA-215	ENST00000488452	OR7G3	Q8NG95	312 aa		13.97	□□□□□ -0.17
NELFA-215	ENST00000488452	CDKL2	Q92772	493 aa		13.97	□□□□□ -0.17
NELFA-215	ENST00000488452	TANK	Q92844	425 aa		13.97	□□□□□ -0.17
NELFA-215	ENST00000488452	FBXL20	Q96IG2	436 aa		13.97	□□□□□ -0.17
NELFA-215	ENST00000488452	UBXN10	Q96LJ8	280 aa		13.97	□□□□□ -0.17
NELFA-215	ENST00000488452	CLEC4M	Q9H2X3	399 aa	Predicted RBP	13.97	□□□□□ -0.17
NELFA-215	ENST00000488452	ZNF703	Q9H7S9	590 aa	Predicted RBP	13.97	□□□□□ -0.17
NELFA-215	ENST00000488452	PROK2	Q9HC23	129 aa		13.97	□□□□□ -0.17
NELFA-215	ENST00000488452	RASSF1	Q9NS23	344 aa		13.97	□□□□□ -0.17
NELFA-215	ENST00000488452	RYDEN	Q9NUL5	291 aa	Known RBP	13.97	□□□□□ -0.17
NELFA-215	ENST00000488452	RNF112	Q9ULX5	631 aa		13.97	□□□□□ -0.17
NELFA-215	ENST00000488452	EDAR	Q9UNE0	448 aa		13.97	□□□□□ -0.17
NELFA-215	ENST00000488452	ITPR3	Q14573	2671 aa		13.97	□□□□□ -0.17
NELFA-215	ENST00000488452	IQANK1	A0A1B0GTG1	560 aa		13.96	□□□□□ -0.17
NELFA-215	ENST00000488452	EFCAB8	A8MWE9	144 aa		13.96	□□□□□ -0.17
NELFA-215	ENST00000488452	CXorf49	A8MYA2	514 aa	Predicted RBP	13.96	□□□□□ -0.17
NELFA-215	ENST00000488452	HRK	O00198	91 aa		13.96	□□□□□ -0.17
NELFA-215	ENST00000488452	ALOX15	P16050	662 aa	Predicted RBP	13.96	□□□□□ -0.17
NELFA-215	ENST00000488452	SSTR1	P30872	391 aa		13.96	□□□□□ -0.17
NELFA-215	ENST00000488452	TLX1	P31314	330 aa	Predicted RBP	13.96	□□□□□ -0.17
NELFA-215	ENST00000488452	UQCRC1	P31930	480 aa		13.96	□□□□□ -0.17
NELFA-215	ENST00000488452	PLIN5	Q00G26	463 aa		13.96	□□□□□ -0.17
NELFA-215	ENST00000488452	PCDH1	Q08174	1060 aa		13.96	□□□□□ -0.17
NELFA-215	ENST00000488452	PRAMEF20	Q5VT98	475 aa		13.96	□□□□□ -0.17
NELFA-215	ENST00000488452	SLC29A4	Q7RTT9	530 aa		13.96	□□□□□ -0.17
NELFA-215	ENST00000488452	GPR180	Q86V85	440 aa		13.96	□□□□□ -0.17
NELFA-215	ENST00000488452	CREG2	Q8IUH2	290 aa		13.96	□□□□□ -0.17
NELFA-215	ENST00000488452	ULK2	Q8IYT8	1036 aa		13.96	□□□□□ -0.17
NELFA-215	ENST00000488452	LIX1	Q8N485	282 aa		13.96	□□□□□ -0.17
NELFA-215	ENST00000488452	FAM13C	Q8NE31	585 aa		13.96	□□□□□ -0.17
NELFA-215	ENST00000488452	NEIL3	Q8TAT5	605 aa		13.96	□□□□□ -0.17
NELFA-215	ENST00000488452	STAG3L4	Q8TBR4	150 aa		13.96	□□□□□ -0.17
NELFA-215	ENST00000488452	PYROXD1	Q8WU10	500 aa		13.96	□□□□□ -0.17
NELFA-215	ENST00000488452	RGMA	Q96B86	450 aa		13.96	□□□□□ -0.17
NELFA-215	ENST00000488452	LRRC46	Q96FV0	321 aa		13.96	□□□□□ -0.17
NELFA-215	ENST00000488452	GPR22	Q99680	433 aa		13.96	□□□□□ -0.17
NELFA-215	ENST00000488452	RBBP8	Q99708	897 aa		13.96	□□□□□ -0.17
NELFA-215	ENST00000488452	CPNE1	Q99829	537 aa		13.96	□□□□□ -0.17
NELFA-215	ENST00000488452	GPATCH1	Q9BRR8	931 aa	Known RBP	13.96	□□□□□ -0.17
NELFA-215	ENST00000488452	SORBS1	Q9BX66	1292 aa	Known RBP	13.96	□□□□□ -0.17
NELFA-215	ENST00000488452	SLC6A15	Q9H2J7	730 aa		13.96	□□□□□ -0.17
NELFA-215	ENST00000488452	OR51B5	Q9H339	312 aa		13.96	□□□□□ -0.17
NELFA-215	ENST00000488452	LIME1	Q9H400	295 aa		13.96	□□□□□ -0.17
NELFA-215	ENST00000488452	TRMT1	Q9NXH9	659 aa	Known RBP	13.96	□□□□□ -0.17
NELFA-215	ENST00000488452	CRIM1	Q9NZV1	1036 aa		13.96	□□□□□ -0.17
NELFA-215	ENST00000488452	ADGRE2	Q9UHX3	823 aa		13.96	□□□□□ -0.17
NELFA-215	ENST00000488452	SNX24	Q9Y343	169 aa		13.96	□□□□□ -0.17
NELFA-215	ENST00000488452	CHCHD2	Q9Y6H1	151 aa	Predicted RBP	13.96	□□□□□ -0.17
NELFA-215	ENST00000488452	PRRC2A	P48634	2157 aa	Known RBP	13.95	□□□□□ -0.18
NELFA-215	ENST00000488452	LRRC3C	A6NJW4	275 aa		13.95	□□□□□ -0.18
NELFA-215	ENST00000488452	AHRR	A9YTQ3	701 aa		13.95	□□□□□ -0.18
NELFA-215	ENST00000488452	CCDC188	H7C350	402 aa		13.95	□□□□□ -0.18
NELFA-215	ENST00000488452	DVL2	O14641	736 aa		13.95	□□□□□ -0.18
NELFA-215	ENST00000488452	EPPIN	O95925	133 aa		13.95	□□□□□ -0.18
NELFA-215	ENST00000488452	FBXO45	P0C2W1	286 aa		13.95	□□□□□ -0.18
NELFA-215	ENST00000488452	KLK2	P20151	261 aa		13.95	□□□□□ -0.18
NELFA-215	ENST00000488452	DNASE1	P24855	282 aa		13.95	□□□□□ -0.18
NELFA-215	ENST00000488452	RPL21	P46778	160 aa	Known RBP	13.95	□□□□□ -0.18
NELFA-215	ENST00000488452	TRPC1	P48995	793 aa		13.95	□□□□□ -0.18
NELFA-215	ENST00000488452	RAP1GDS1	P52306	607 aa		13.95	□□□□□ -0.18
NELFA-215	ENST00000488452	RAB10	P61026	200 aa		13.95	□□□□□ -0.18
NELFA-215	ENST00000488452	PPP2R2A	P63151	447 aa		13.95	□□□□□ -0.18
NELFA-215	ENST00000488452	TNFRSF17	Q02223	184 aa		13.95	□□□□□ -0.18
NELFA-215	ENST00000488452	ZKSCAN8	Q15776	578 aa	Predicted RBP	13.95	□□□□□ -0.18
NELFA-215	ENST00000488452	C18orf63	Q68DL7	685 aa		13.95	□□□□□ -0.18
NELFA-215	ENST00000488452	SEM1	Q6ZVN7	128 aa		13.95	□□□□□ -0.18
NELFA-215	ENST00000488452	CYS1	Q717R9	158 aa		13.95	□□□□□ -0.18
NELFA-215	ENST00000488452	ST13P4	Q8IZP2	240 aa	Predicted RBP	13.95	□□□□□ -0.18
NELFA-215	ENST00000488452	OR10G3	Q8NGC4	313 aa		13.95	□□□□□ -0.18
NELFA-215	ENST00000488452	GOT1L1	Q8NHS2	421 aa	Predicted RBP	13.95	□□□□□ -0.18
NELFA-215	ENST00000488452	DOK4	Q8TEW6	326 aa		13.95	□□□□□ -0.18
NELFA-215	ENST00000488452	EXT2	Q93063	718 aa		13.95	□□□□□ -0.18
NELFA-215	ENST00000488452	RMND5B	Q96G75	393 aa	Predicted RBP	13.95	□□□□□ -0.18
NELFA-215	ENST00000488452	JSRP1	Q96MG2	331 aa	Predicted RBP	13.95	□□□□□ -0.18
NELFA-215	ENST00000488452	PELO	Q9BRX2	385 aa	Known RBP	13.95	□□□□□ -0.18
NELFA-215	ENST00000488452	CENPK	Q9BS16	269 aa		13.95	□□□□□ -0.18
NELFA-215	ENST00000488452	NUDT4	Q9NZJ9	180 aa		13.95	□□□□□ -0.18
NELFA-215	ENST00000488452	OPTC	Q9UBM4	332 aa		13.95	□□□□□ -0.18
NELFA-215	ENST00000488452	PHF11	Q9UIL8	331 aa		13.95	□□□□□ -0.18
NELFA-215	ENST00000488452	CNOT11	Q9UKZ1	510 aa	Known RBP	13.95	□□□□□ -0.18
NELFA-215	ENST00000488452		A6NNC1	897 aa		13.94	□□□□□ -0.18
NELFA-215	ENST00000488452		K7EPI3	171 aa		13.94	□□□□□ -0.18
NELFA-215	ENST00000488452	PROM1	O43490	865 aa		13.94	□□□□□ -0.18
NELFA-215	ENST00000488452	GPR75	O95800	540 aa		13.94	□□□□□ -0.18
NELFA-215	ENST00000488452	C1QA	P02745	245 aa		13.94	□□□□□ -0.18
NELFA-215	ENST00000488452	BMP5	P22003	454 aa		13.94	□□□□□ -0.18
NELFA-215	ENST00000488452	CEACAM8	P31997	349 aa	Predicted RBP	13.94	□□□□□ -0.18
NELFA-215	ENST00000488452	GP5	P40197	560 aa		13.94	□□□□□ -0.18
NELFA-215	ENST00000488452	BUD31	P41223	144 aa	Predicted RBP	13.94	□□□□□ -0.18
NELFA-215	ENST00000488452	ARFIP1	P53367	373 aa		13.94	□□□□□ -0.18
NELFA-215	ENST00000488452	HERVK_113	P63132	956 aa		13.94	□□□□□ -0.18
NELFA-215	ENST00000488452	ERVK-8	P63133	956 aa		13.94	□□□□□ -0.18
NELFA-215	ENST00000488452	DDX39B	Q13838	428 aa	Known RBP	13.94	□□□□□ -0.18
NELFA-215	ENST00000488452	ZNF267	Q14586	743 aa	Predicted RBP	13.94	□□□□□ -0.18
NELFA-215	ENST00000488452	CEBPE	Q15744	281 aa		13.94	□□□□□ -0.18
NELFA-215	ENST00000488452	NTRK2	Q16620	822 aa		13.94	□□□□□ -0.18
NELFA-215	ENST00000488452	SPRED3	Q2MJR0	410 aa		13.94	□□□□□ -0.18
NELFA-215	ENST00000488452	TMEM198	Q66K66	360 aa		13.94	□□□□□ -0.18
NELFA-215	ENST00000488452	RNF111	Q6ZNA4	994 aa		13.94	□□□□□ -0.18
NELFA-215	ENST00000488452	ISCA2	Q86U28	154 aa		13.94	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 25 ms