RNA–Protein interactions for RNA: ENST00000488127.1

LDLRAP1-207, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

TSL 2

Gene LDLRAP1, Length 4,670 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-207ENST00000488127 HCN2Q9UL51 889 aa11.17□□□□□ -0.62
LDLRAP1-207ENST00000488127 SIT1Q9Y3P8 196 aa11.17□□□□□ -0.62
LDLRAP1-207ENST00000488127 MAB21L2Q9Y586 359 aa11.17□□□□□ -0.62
LDLRAP1-207ENST00000488127 PRAMEF26H0Y7S4 382 aa11.16□□□□□ -0.62
LDLRAP1-207ENST00000488127 EGFP01133 1207 aa11.16□□□□□ -0.62
LDLRAP1-207ENST00000488127 C7P10643 843 aa11.16□□□□□ -0.62
LDLRAP1-207ENST00000488127 IL1RNP18510 177 aa11.16□□□□□ -0.62
LDLRAP1-207ENST00000488127 CSNK1EP49674 416 aaKnown RBP11.16□□□□□ -0.62
LDLRAP1-207ENST00000488127 RAB28P51157 221 aa11.16□□□□□ -0.62
LDLRAP1-207ENST00000488127 CDKL1Q00532 357 aa11.16□□□□□ -0.62
LDLRAP1-207ENST00000488127 SEMA3BQ13214 749 aa11.16□□□□□ -0.62
LDLRAP1-207ENST00000488127 SMCO1Q147U7 214 aa11.16□□□□□ -0.62
LDLRAP1-207ENST00000488127 ABRAXAS2Q15018 415 aa11.16□□□□□ -0.62
LDLRAP1-207ENST00000488127 TAF13Q15543 124 aa11.16□□□□□ -0.62
LDLRAP1-207ENST00000488127 KLHL24Q6TFL4 600 aa11.16□□□□□ -0.62
LDLRAP1-207ENST00000488127 DNAJB8Q8NHS0 232 aa11.16□□□□□ -0.62
LDLRAP1-207ENST00000488127 CEP76Q8TAP6 659 aa11.16□□□□□ -0.62
LDLRAP1-207ENST00000488127 RAB8BQ92930 207 aa11.16□□□□□ -0.62
LDLRAP1-207ENST00000488127 HAVCR1Q96D42 359 aa11.16□□□□□ -0.62
LDLRAP1-207ENST00000488127 ZNF486Q96H40 463 aaPredicted RBP11.16□□□□□ -0.62
LDLRAP1-207ENST00000488127 FUZQ9BT04 418 aa11.16□□□□□ -0.62
LDLRAP1-207ENST00000488127 CPNE5Q9HCH3 593 aa11.16□□□□□ -0.62
LDLRAP1-207ENST00000488127 HPF1Q9NWY4 346 aa11.16□□□□□ -0.62
LDLRAP1-207ENST00000488127 ERVK13-1Q9NX77 482 aa11.16□□□□□ -0.62
LDLRAP1-207ENST00000488127 POFUT2Q9Y2G5 429 aa11.16□□□□□ -0.62
LDLRAP1-207ENST00000488127 ARID1BQ8NFD5 2236 aaPredicted RBP11.16□□□□□ -0.62
LDLRAP1-207ENST00000488127 FAM221BA6H8Z2 402 aa11.16□□□□□ -0.62
LDLRAP1-207ENST00000488127 PRORSD1PA6NEY8 169 aa11.16□□□□□ -0.62
LDLRAP1-207ENST00000488127 M0R233 179 aa11.16□□□□□ -0.62
LDLRAP1-207ENST00000488127 C6orf47O95873 294 aa11.16□□□□□ -0.62
LDLRAP1-207ENST00000488127 CD247P20963 164 aa11.16□□□□□ -0.62
LDLRAP1-207ENST00000488127 CAMK1Q14012 370 aa11.16□□□□□ -0.62
LDLRAP1-207ENST00000488127 NOXRED1Q6NXP6 359 aa11.16□□□□□ -0.62
LDLRAP1-207ENST00000488127 RPTNQ6XPR3 784 aa11.16□□□□□ -0.62
LDLRAP1-207ENST00000488127 OAFQ86UD1 273 aa11.16□□□□□ -0.62
LDLRAP1-207ENST00000488127 CBARPQ8N350 705 aaPredicted RBP11.16□□□□□ -0.62
LDLRAP1-207ENST00000488127 TMIEQ8NEW7 156 aa11.16□□□□□ -0.62
LDLRAP1-207ENST00000488127 MR1Q95460 341 aa11.16□□□□□ -0.62
LDLRAP1-207ENST00000488127 BHLHE41Q9C0J9 482 aaPredicted RBP11.16□□□□□ -0.62
LDLRAP1-207ENST00000488127 OR51V1Q9H2C8 321 aa11.16□□□□□ -0.62
LDLRAP1-207ENST00000488127 PDE7BQ9NP56 450 aa11.16□□□□□ -0.62
LDLRAP1-207ENST00000488127 CEPT1Q9Y6K0 416 aa11.16□□□□□ -0.62
LDLRAP1-207ENST00000488127 MICAL3Q7RTP6 2002 aa11.16□□□□□ -0.62
LDLRAP1-207ENST00000488127 TRAV6A0A075B6T7 132 aa11.16□□□□□ -0.62
LDLRAP1-207ENST00000488127 MYF6P23409 242 aa11.16□□□□□ -0.62
LDLRAP1-207ENST00000488127 HTR6P50406 440 aa11.16□□□□□ -0.62
LDLRAP1-207ENST00000488127 NNATQ16517 81 aa11.16□□□□□ -0.62
LDLRAP1-207ENST00000488127 PNCKQ6P2M8 343 aa11.16□□□□□ -0.62
LDLRAP1-207ENST00000488127 KRTCAP2Q8N6L1 136 aa11.16□□□□□ -0.62
LDLRAP1-207ENST00000488127 MYEOVQ96EZ4 313 aa11.16□□□□□ -0.62
LDLRAP1-207ENST00000488127 PTCHD1Q96NR3 888 aa11.16□□□□□ -0.62
LDLRAP1-207ENST00000488127 PKP4Q99569 1192 aa11.16□□□□□ -0.62
LDLRAP1-207ENST00000488127 BCL2L14Q9BZR8 327 aa11.16□□□□□ -0.62
LDLRAP1-207ENST00000488127 LHPPQ9H008 270 aa11.16□□□□□ -0.62
LDLRAP1-207ENST00000488127 YBX2Q9Y2T7 364 aaKnown RBP11.16□□□□□ -0.62
LDLRAP1-207ENST00000488127 PRRT4C9JH25 899 aa11.15□□□□□ -0.62
LDLRAP1-207ENST00000488127 TLR4O00206 839 aa11.15□□□□□ -0.62
LDLRAP1-207ENST00000488127 CEBPGP53567 150 aa11.15□□□□□ -0.62
LDLRAP1-207ENST00000488127 DNAJB13P59910 316 aa11.15□□□□□ -0.62
LDLRAP1-207ENST00000488127 SNRPD2P62316 118 aaKnown RBP11.15□□□□□ -0.62
LDLRAP1-207ENST00000488127 TXNL4AP83876 142 aaKnown RBP11.15□□□□□ -0.62
LDLRAP1-207ENST00000488127 TSC22D1Q15714 1073 aa11.15□□□□□ -0.62
LDLRAP1-207ENST00000488127 FAM214AQ32MH5 1076 aa11.15□□□□□ -0.62
LDLRAP1-207ENST00000488127 CRB2Q5IJ48 1285 aa11.15□□□□□ -0.62
LDLRAP1-207ENST00000488127 C1orf189Q5VU69 101 aa11.15□□□□□ -0.62
LDLRAP1-207ENST00000488127 KCNN1Q92952 543 aa11.15□□□□□ -0.62
LDLRAP1-207ENST00000488127 ANKRD60Q9BZ19 345 aa11.15□□□□□ -0.62
LDLRAP1-207ENST00000488127 ARNT2Q9HBZ2 717 aa11.15□□□□□ -0.62
LDLRAP1-207ENST00000488127 CMAHPQ9Y471 501 aa11.15□□□□□ -0.62
LDLRAP1-207ENST00000488127 TTC3P53804 2025 aa11.15□□□□□ -0.62
LDLRAP1-207ENST00000488127 DUX1O43812 170 aa11.15□□□□□ -0.62
LDLRAP1-207ENST00000488127 CRYZL1O95825 349 aa11.15□□□□□ -0.62
LDLRAP1-207ENST00000488127 DCNP07585 359 aaKnown RBP11.15□□□□□ -0.62
LDLRAP1-207ENST00000488127 CD9P21926 228 aa11.15□□□□□ -0.62
LDLRAP1-207ENST00000488127 CCR7P32248 378 aa11.15□□□□□ -0.62
LDLRAP1-207ENST00000488127 XKP51811 444 aa11.15□□□□□ -0.62
LDLRAP1-207ENST00000488127 CRISP3P54108 245 aa11.15□□□□□ -0.62
LDLRAP1-207ENST00000488127 MRPS21P82921 87 aaKnown RBP11.15□□□□□ -0.62
LDLRAP1-207ENST00000488127 ADAM15Q13444 863 aa11.15□□□□□ -0.62
LDLRAP1-207ENST00000488127 TAZQ16635 292 aa11.15□□□□□ -0.62
LDLRAP1-207ENST00000488127 SMARCD3Q6STE5 483 aa11.15□□□□□ -0.62
LDLRAP1-207ENST00000488127 RTL4Q6ZR62 310 aa11.15□□□□□ -0.62
LDLRAP1-207ENST00000488127 TTLL10Q6ZVT0 673 aa11.15□□□□□ -0.62
LDLRAP1-207ENST00000488127 OR4N5Q8IXE1 308 aa11.15□□□□□ -0.62
LDLRAP1-207ENST00000488127 PIAS4Q8N2W9 510 aaPredicted RBP11.15□□□□□ -0.62
LDLRAP1-207ENST00000488127 THAP3Q8WTV1 239 aaPredicted RBP11.15□□□□□ -0.62
LDLRAP1-207ENST00000488127 TP63Q9H3D4 680 aaPredicted RBP11.15□□□□□ -0.62
LDLRAP1-207ENST00000488127 ELL3Q9HB65 397 aaPredicted RBP11.15□□□□□ -0.62
LDLRAP1-207ENST00000488127 IL21Q9HBE4 155 aa11.15□□□□□ -0.62
LDLRAP1-207ENST00000488127 CUEDC1Q9NWM3 386 aaPredicted RBP11.15□□□□□ -0.62
LDLRAP1-207ENST00000488127 MKS1Q9NXB0 559 aa11.15□□□□□ -0.62
LDLRAP1-207ENST00000488127 ARPC4-TTLL3A0A0A6YYG9 625 aa11.15□□□□□ -0.62
LDLRAP1-207ENST00000488127 SNNO75324 88 aaPredicted RBP11.15□□□□□ -0.62
LDLRAP1-207ENST00000488127 BCHEP06276 602 aa11.15□□□□□ -0.62
LDLRAP1-207ENST00000488127 DNAJB1P25685 340 aa11.15□□□□□ -0.62
LDLRAP1-207ENST00000488127 MAN2A2P49641 1150 aa11.15□□□□□ -0.62
LDLRAP1-207ENST00000488127 SH3BP2P78314 561 aa11.15□□□□□ -0.62
LDLRAP1-207ENST00000488127 PITPNAQ00169 270 aa11.15□□□□□ -0.62
LDLRAP1-207ENST00000488127 EMX2Q04743 252 aa11.15□□□□□ -0.62
LDLRAP1-207ENST00000488127 ZNF763Q0D2J5 394 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms