RNA–Protein interactions for RNA: ENST00000487989.1

PFKFB3-213, Transcript of 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3, humanhuman

TSL 2

Gene PFKFB3, Length 661 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFKFB3-213ENST00000487989 LRFN1Q9P244 771 aa13.18□□□□□ -0.3
PFKFB3-213ENST00000487989 COPS7AQ9UBW8 275 aa13.18□□□□□ -0.3
PFKFB3-213ENST00000487989 RELNP78509 3460 aa13.18□□□□□ -0.3
PFKFB3-213ENST00000487989 CPAMD8Q8IZJ3 1885 aa13.18□□□□□ -0.3
PFKFB3-213ENST00000487989 CNTRLQ7Z7A1 2325 aa13.18□□□□□ -0.3
PFKFB3-213ENST00000487989 SERTM1A2A2V5 107 aa13.17□□□□□ -0.3
PFKFB3-213ENST00000487989 RGS16O15492 202 aaPredicted RBP13.17□□□□□ -0.3
PFKFB3-213ENST00000487989 ITGA10O75578 1167 aa13.17□□□□□ -0.3
PFKFB3-213ENST00000487989 NEURL1O76050 574 aa13.17□□□□□ -0.3
PFKFB3-213ENST00000487989 RASAL1O95294 804 aa13.17□□□□□ -0.3
PFKFB3-213ENST00000487989 CBX6O95503 412 aa13.17□□□□□ -0.3
PFKFB3-213ENST00000487989 SLC35E2P0CK97 266 aa13.17□□□□□ -0.3
PFKFB3-213ENST00000487989 CD46P15529 392 aa13.17□□□□□ -0.3
PFKFB3-213ENST00000487989 CREB1P16220 341 aa13.17□□□□□ -0.3
PFKFB3-213ENST00000487989 PIK3R1P27986 724 aa13.17□□□□□ -0.3
PFKFB3-213ENST00000487989 SERPINB3P29508 390 aa13.17□□□□□ -0.3
PFKFB3-213ENST00000487989 ALDH3A1P30838 453 aa13.17□□□□□ -0.3
PFKFB3-213ENST00000487989 TRHRP34981 398 aaPredicted RBP13.17□□□□□ -0.3
PFKFB3-213ENST00000487989 CYB561P49447 251 aa13.17□□□□□ -0.3
PFKFB3-213ENST00000487989 HLCSP50747 726 aa13.17□□□□□ -0.3
PFKFB3-213ENST00000487989 MRPL49Q13405 166 aaKnown RBP13.17□□□□□ -0.3
PFKFB3-213ENST00000487989 INAQ16352 499 aa13.17□□□□□ -0.3
PFKFB3-213ENST00000487989 C16orf47Q6ZP98 133 aaPredicted RBP13.17□□□□□ -0.3
PFKFB3-213ENST00000487989 BCORP1Q8N888 145 aa13.17□□□□□ -0.3
PFKFB3-213ENST00000487989 DOK4Q8TEW6 326 aa13.17□□□□□ -0.3
PFKFB3-213ENST00000487989 ZNF721Q8TF20 911 aa13.17□□□□□ -0.3
PFKFB3-213ENST00000487989 RIT1Q92963 219 aa13.17□□□□□ -0.3
PFKFB3-213ENST00000487989 TM4SF18Q96CE8 201 aa13.17□□□□□ -0.3
PFKFB3-213ENST00000487989 C5orf34Q96MH7 638 aa13.17□□□□□ -0.3
PFKFB3-213ENST00000487989 LIN28AQ9H9Z2 209 aaKnown RBP13.17□□□□□ -0.3
PFKFB3-213ENST00000487989 TNFRSF12AQ9NP84 129 aa13.17□□□□□ -0.3
PFKFB3-213ENST00000487989 SENP1Q9P0U3 644 aa13.17□□□□□ -0.3
PFKFB3-213ENST00000487989 YARS2Q9Y2Z4 477 aaKnown RBP13.17□□□□□ -0.3
PFKFB3-213ENST00000487989 PCDHGB6Q9Y5F9 930 aa13.17□□□□□ -0.3
PFKFB3-213ENST00000487989 PCDHA9Q9Y5H5 950 aa13.17□□□□□ -0.3
PFKFB3-213ENST00000487989 COL12A1Q99715 3063 aa13.16□□□□□ -0.3
PFKFB3-213ENST00000487989 A0A1W2PS29 197 aa13.16□□□□□ -0.3
PFKFB3-213ENST00000487989 C1orf226A1L170 272 aa13.16□□□□□ -0.3
PFKFB3-213ENST00000487989 TMEM200CA6NKL6 621 aa13.16□□□□□ -0.3
PFKFB3-213ENST00000487989 HRKO00198 91 aa13.16□□□□□ -0.3
PFKFB3-213ENST00000487989 WWP2O00308 870 aa13.16□□□□□ -0.3
PFKFB3-213ENST00000487989 SP1P08047 785 aa13.16□□□□□ -0.3
PFKFB3-213ENST00000487989 UROSP10746 265 aa13.16□□□□□ -0.3
PFKFB3-213ENST00000487989 DEKP35659 375 aaKnown RBP13.16□□□□□ -0.3
PFKFB3-213ENST00000487989 SSR4P51571 173 aa13.16□□□□□ -0.3
PFKFB3-213ENST00000487989 XKP51811 444 aa13.16□□□□□ -0.3
PFKFB3-213ENST00000487989 TRA2BP62995 288 aaKnown RBP13.16□□□□□ -0.3
PFKFB3-213ENST00000487989 RNF4P78317 190 aa13.16□□□□□ -0.3
PFKFB3-213ENST00000487989 BTKQ06187 659 aa13.16□□□□□ -0.3
PFKFB3-213ENST00000487989 ACSM2AQ08AH3 577 aa13.16□□□□□ -0.3
PFKFB3-213ENST00000487989 ELOAQ14241 798 aaKnown RBP13.16□□□□□ -0.3
PFKFB3-213ENST00000487989 ZNF267Q14586 743 aaPredicted RBP13.16□□□□□ -0.3
PFKFB3-213ENST00000487989 IMPG1Q17R60 797 aa13.16□□□□□ -0.3
PFKFB3-213ENST00000487989 EIF2S3LQ2VIR3 472 aaKnown RBP13.16□□□□□ -0.3
PFKFB3-213ENST00000487989 SPIN4Q56A73 249 aa13.16□□□□□ -0.3
PFKFB3-213ENST00000487989 SPDYAQ5MJ70 313 aa13.16□□□□□ -0.3
PFKFB3-213ENST00000487989 ACSM2BQ68CK6 577 aa13.16□□□□□ -0.3
PFKFB3-213ENST00000487989 SLC25A25Q6KCM7 469 aa13.16□□□□□ -0.3
PFKFB3-213ENST00000487989 SLC48A1Q6P1K1 146 aa13.16□□□□□ -0.3
PFKFB3-213ENST00000487989 TMEM156Q8N614 296 aa13.16□□□□□ -0.3
PFKFB3-213ENST00000487989 TMEM178AQ8NBL3 297 aa13.16□□□□□ -0.3
PFKFB3-213ENST00000487989 OR5L2Q8NGL0 311 aa13.16□□□□□ -0.3
PFKFB3-213ENST00000487989 OR8K3Q8NH51 312 aa13.16□□□□□ -0.3
PFKFB3-213ENST00000487989 ZBTB9Q96C00 473 aa13.16□□□□□ -0.3
PFKFB3-213ENST00000487989 SCMH1Q96GD3 660 aa13.16□□□□□ -0.3
PFKFB3-213ENST00000487989 APIPQ96GX9 242 aa13.16□□□□□ -0.3
PFKFB3-213ENST00000487989 FBXL20Q96IG2 436 aa13.16□□□□□ -0.3
PFKFB3-213ENST00000487989 ART5Q96L15 291 aa13.16□□□□□ -0.3
PFKFB3-213ENST00000487989 ZIM3Q96PE6 472 aa13.16□□□□□ -0.3
PFKFB3-213ENST00000487989 TRMOQ9BU70 441 aa13.16□□□□□ -0.3
PFKFB3-213ENST00000487989 MECRQ9BV79 373 aa13.16□□□□□ -0.3
PFKFB3-213ENST00000487989 CNPPD1Q9BV87 410 aa13.16□□□□□ -0.3
PFKFB3-213ENST00000487989 FAIM2Q9BWQ8 316 aa13.16□□□□□ -0.3
PFKFB3-213ENST00000487989 HES7Q9BYE0 225 aa13.16□□□□□ -0.3
PFKFB3-213ENST00000487989 CENPHQ9H3R5 247 aa13.16□□□□□ -0.3
PFKFB3-213ENST00000487989 TRIM45Q9H8W5 580 aaPredicted RBP13.16□□□□□ -0.3
PFKFB3-213ENST00000487989 OLAHQ9NV23 265 aa13.16□□□□□ -0.3
PFKFB3-213ENST00000487989 MYOTQ9UBF9 498 aa13.16□□□□□ -0.3
PFKFB3-213ENST00000487989 MCM8Q9UJA3 840 aa13.16□□□□□ -0.3
PFKFB3-213ENST00000487989 RP1L1Q8IWN7 2480 aaPredicted RBP13.15□□□□□ -0.3
PFKFB3-213ENST00000487989 GNG14A0A1W2PPG7 69 aa13.15□□□□□ -0.3
PFKFB3-213ENST00000487989 ANKUB1A6NFN9 424 aa13.15□□□□□ -0.3
PFKFB3-213ENST00000487989 TYROBPO43914 113 aa13.15□□□□□ -0.3
PFKFB3-213ENST00000487989 PCDH7O60245 1069 aa13.15□□□□□ -0.3
PFKFB3-213ENST00000487989 SLC25A12O75746 678 aa13.15□□□□□ -0.3
PFKFB3-213ENST00000487989 OR2J2O76002 312 aa13.15□□□□□ -0.3
PFKFB3-213ENST00000487989 CRYABP02511 175 aaKnown RBP13.15□□□□□ -0.3
PFKFB3-213ENST00000487989 IGKV3-11P04433 115 aa13.15□□□□□ -0.3
PFKFB3-213ENST00000487989 GALNSP34059 522 aa13.15□□□□□ -0.3
PFKFB3-213ENST00000487989 ALDH9A1P49189 494 aa13.15□□□□□ -0.3
PFKFB3-213ENST00000487989 HK2P52789 917 aa13.15□□□□□ -0.3
PFKFB3-213ENST00000487989 ERVK-8P63133 956 aa13.15□□□□□ -0.3
PFKFB3-213ENST00000487989 RAE1P78406 368 aaKnown RBP13.15□□□□□ -0.3
PFKFB3-213ENST00000487989 MAPKAPK3Q16644 382 aa13.15□□□□□ -0.3
PFKFB3-213ENST00000487989 SPRED3Q2MJR0 410 aa13.15□□□□□ -0.3
PFKFB3-213ENST00000487989 CEP85LQ5SZL2 805 aa13.15□□□□□ -0.3
PFKFB3-213ENST00000487989 CLEC6AQ6EIG7 209 aa13.15□□□□□ -0.3
PFKFB3-213ENST00000487989 TRIM46Q7Z4K8 759 aa13.15□□□□□ -0.3
PFKFB3-213ENST00000487989 GALNTL5Q7Z4T8 443 aa13.15□□□□□ -0.3
PFKFB3-213ENST00000487989 ZNF227Q86WZ6 799 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms