RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 TNRQ92752 1358 aa2.52□□□□□ -2.01
SMC4-219ENST00000487747 PFASO15067 1338 aa2.52□□□□□ -2.01
SMC4-219ENST00000487747 GTPBP10A4D1E9 387 aaKnown RBP2.52□□□□□ -2.01
SMC4-219ENST00000487747 C5orf52A6NGY3 159 aa2.52□□□□□ -2.01
SMC4-219ENST00000487747 A8MX80 341 aa2.52□□□□□ -2.01
SMC4-219ENST00000487747 CLN5O75503 358 aa2.52□□□□□ -2.01
SMC4-219ENST00000487747 GLRA1P23415 457 aa2.52□□□□□ -2.01
SMC4-219ENST00000487747 MTIF2P46199 727 aaKnown RBP2.52□□□□□ -2.01
SMC4-219ENST00000487747 ARHGDIAP52565 204 aa2.52□□□□□ -2.01
SMC4-219ENST00000487747 ASAH1Q13510 395 aa2.52□□□□□ -2.01
SMC4-219ENST00000487747 DCAF12Q5T6F0 453 aa2.52□□□□□ -2.01
SMC4-219ENST00000487747 CHST3Q7LGC8 479 aa2.52□□□□□ -2.01
SMC4-219ENST00000487747 ARL14Q8N4G2 192 aa2.52□□□□□ -2.01
SMC4-219ENST00000487747 Q8N9G6 341 aaPredicted RBP2.52□□□□□ -2.01
SMC4-219ENST00000487747 CRYGNQ8WXF5 182 aa2.52□□□□□ -2.01
SMC4-219ENST00000487747 SGF29Q96ES7 293 aa2.52□□□□□ -2.01
SMC4-219ENST00000487747 PCED1BQ96HM7 432 aa2.52□□□□□ -2.01
SMC4-219ENST00000487747 RAB40CQ96S21 281 aa2.52□□□□□ -2.01
SMC4-219ENST00000487747 ST6GALNAC5Q9BVH7 336 aa2.52□□□□□ -2.01
SMC4-219ENST00000487747 CHMP4AQ9BY43 222 aa2.52□□□□□ -2.01
SMC4-219ENST00000487747 UBA5Q9GZZ9 404 aa2.52□□□□□ -2.01
SMC4-219ENST00000487747 ADGRL4Q9HBW9 690 aa2.52□□□□□ -2.01
SMC4-219ENST00000487747 CCL27Q9Y4X3 112 aa2.52□□□□□ -2.01
SMC4-219ENST00000487747 P4HA2O15460 535 aa2.51□□□□□ -2.01
SMC4-219ENST00000487747 SELENOFO60613 162 aa2.51□□□□□ -2.01
SMC4-219ENST00000487747 CSDE1O75534 798 aaKnown RBP2.51□□□□□ -2.01
SMC4-219ENST00000487747 HSPB1P04792 205 aaKnown RBP2.51□□□□□ -2.01
SMC4-219ENST00000487747 CCDC175P0C221 793 aa2.51□□□□□ -2.01
SMC4-219ENST00000487747 OR1D2P34982 312 aa2.51□□□□□ -2.01
SMC4-219ENST00000487747 TRPC1P48995 793 aa2.51□□□□□ -2.01
SMC4-219ENST00000487747 MFAP2P55001 183 aa2.51□□□□□ -2.01
SMC4-219ENST00000487747 KCTD2Q14681 263 aa2.51□□□□□ -2.01
SMC4-219ENST00000487747 PSMD6Q15008 389 aa2.51□□□□□ -2.01
SMC4-219ENST00000487747 MICAQ29983 383 aa2.51□□□□□ -2.01
SMC4-219ENST00000487747 SHEQ5VZ18 495 aa2.51□□□□□ -2.01
SMC4-219ENST00000487747 RPUSD3Q6P087 351 aaKnown RBP2.51□□□□□ -2.01
SMC4-219ENST00000487747 ALKBH5Q6P6C2 394 aaKnown RBP2.51□□□□□ -2.01
SMC4-219ENST00000487747 MKXQ8IYA7 352 aa2.51□□□□□ -2.01
SMC4-219ENST00000487747 Q8NFD4 153 aa2.51□□□□□ -2.01
SMC4-219ENST00000487747 BSCL2Q96G97 398 aaPredicted RBP2.51□□□□□ -2.01
SMC4-219ENST00000487747 OR5M11Q96RB7 305 aa2.51□□□□□ -2.01
SMC4-219ENST00000487747 RTBDNQ9BSG5 229 aaPredicted RBP2.51□□□□□ -2.01
SMC4-219ENST00000487747 CENPOQ9BU64 300 aa2.51□□□□□ -2.01
SMC4-219ENST00000487747 MINDY3Q9H8M7 445 aa2.51□□□□□ -2.01
SMC4-219ENST00000487747 TIGARQ9NQ88 270 aa2.51□□□□□ -2.01
SMC4-219ENST00000487747 SENP1Q9P0U3 644 aa2.51□□□□□ -2.01
SMC4-219ENST00000487747 EIF3KQ9UBQ5 218 aaKnown RBP2.51□□□□□ -2.01
SMC4-219ENST00000487747 KLK12Q9UKR0 248 aa2.51□□□□□ -2.01
SMC4-219ENST00000487747 OR1A2Q9Y585 309 aa2.51□□□□□ -2.01
SMC4-219ENST00000487747 SLC15A5A6NIM6 579 aa2.5□□□□□ -2.01
SMC4-219ENST00000487747 LRP3O75074 770 aa2.5□□□□□ -2.01
SMC4-219ENST00000487747 IGHV3-9P01782 118 aa2.5□□□□□ -2.01
SMC4-219ENST00000487747 NPY4RP50391 375 aa2.5□□□□□ -2.01
SMC4-219ENST00000487747 LINC00315P59091 139 aa2.5□□□□□ -2.01
SMC4-219ENST00000487747 CALD1Q05682 793 aaKnown RBP2.5□□□□□ -2.01
SMC4-219ENST00000487747 CDO1Q16878 200 aa2.5□□□□□ -2.01
SMC4-219ENST00000487747 QRICH1Q2TAL8 776 aa2.5□□□□□ -2.01
SMC4-219ENST00000487747 TCP11X2Q5H9J9 407 aa2.5□□□□□ -2.01
SMC4-219ENST00000487747 SPOUT1Q5T280 376 aaKnown RBP2.5□□□□□ -2.01
SMC4-219ENST00000487747 OTPQ5XKR4 325 aa2.5□□□□□ -2.01
SMC4-219ENST00000487747 OTOAQ7RTW8 1153 aa2.5□□□□□ -2.01
SMC4-219ENST00000487747 SPATA21Q7Z572 469 aa2.5□□□□□ -2.01
SMC4-219ENST00000487747 GVQW1Q8N7I0 195 aa2.5□□□□□ -2.01
SMC4-219ENST00000487747 KIF18AQ8NI77 898 aa2.5□□□□□ -2.01
SMC4-219ENST00000487747 SETD7Q8WTS6 366 aaKnown RBP2.5□□□□□ -2.01
SMC4-219ENST00000487747 TCP11Q8WWU5 503 aa2.5□□□□□ -2.01
SMC4-219ENST00000487747 INPP5KQ9BT40 448 aa2.5□□□□□ -2.01
SMC4-219ENST00000487747 RNF41Q9H4P4 317 aaPredicted RBP2.5□□□□□ -2.01
SMC4-219ENST00000487747 KCNMB3Q9NPA1 279 aa2.5□□□□□ -2.01
SMC4-219ENST00000487747 ANKEF1Q9NU02 776 aa2.5□□□□□ -2.01
SMC4-219ENST00000487747 MYO10Q9HD67 2058 aa2.49□□□□□ -2.01
SMC4-219ENST00000487747 ILVBLA1L0T0 632 aa2.49□□□□□ -2.01
SMC4-219ENST00000487747 PDXKO00764 312 aa2.49□□□□□ -2.01
SMC4-219ENST00000487747 KIAA0513O60268 411 aa2.49□□□□□ -2.01
SMC4-219ENST00000487747 VDRP11473 427 aa2.49□□□□□ -2.01
SMC4-219ENST00000487747 PTAFRP25105 342 aa2.49□□□□□ -2.01
SMC4-219ENST00000487747 PRKCIP41743 596 aa2.49□□□□□ -2.01
SMC4-219ENST00000487747 RIPPLY3P57055 190 aa2.49□□□□□ -2.01
SMC4-219ENST00000487747 MFGE8Q08431 387 aaPredicted RBP2.49□□□□□ -2.01
SMC4-219ENST00000487747 ACER2Q5QJU3 275 aa2.49□□□□□ -2.01
SMC4-219ENST00000487747 MFSD4BQ5TF39 518 aa2.49□□□□□ -2.01
SMC4-219ENST00000487747 IRGCQ6NXR0 463 aa2.49□□□□□ -2.01
SMC4-219ENST00000487747 SIGLEC15Q6ZMC9 328 aa2.49□□□□□ -2.01
SMC4-219ENST00000487747 PHLDB2Q86SQ0 1253 aa2.49□□□□□ -2.01
SMC4-219ENST00000487747 KIAA0895Q8NCT3 520 aa2.49□□□□□ -2.01
SMC4-219ENST00000487747 CCDC197Q8NCU1 140 aa2.49□□□□□ -2.01
SMC4-219ENST00000487747 SCRT1Q9BWW7 348 aa2.49□□□□□ -2.01
SMC4-219ENST00000487747 TXLNGYQ9BZA5 131 aa2.49□□□□□ -2.01
SMC4-219ENST00000487747 NMUR2Q9GZQ4 415 aa2.49□□□□□ -2.01
SMC4-219ENST00000487747 MAF1Q9H063 256 aa2.49□□□□□ -2.01
SMC4-219ENST00000487747 ARHGAP23Q9P227 1491 aa2.49□□□□□ -2.01
SMC4-219ENST00000487747 ATP6AP2A0A1C7CYW4 349 aa2.48□□□□□ -2.01
SMC4-219ENST00000487747 TRABD2BA6NFA1 517 aa2.48□□□□□ -2.01
SMC4-219ENST00000487747 M0R296 226 aa2.48□□□□□ -2.01
SMC4-219ENST00000487747 CCSO14618 274 aa2.48□□□□□ -2.01
SMC4-219ENST00000487747 EMC8O43402 210 aa2.48□□□□□ -2.01
SMC4-219ENST00000487747 FOXH1O75593 365 aa2.48□□□□□ -2.01
SMC4-219ENST00000487747 ANXA9O76027 345 aa2.48□□□□□ -2.01
SMC4-219ENST00000487747 EZRP15311 586 aaKnown RBP2.48□□□□□ -2.01
SMC4-219ENST00000487747 IDSP22304 550 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms