RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 H7C423 109 aa2.92□□□□□ -1.94
SNRNP27-204ENST00000487029 SOCS3O14543 225 aa2.92□□□□□ -1.94
SNRNP27-204ENST00000487029 SNAP91O60641 907 aa2.92□□□□□ -1.94
SNRNP27-204ENST00000487029 ANXA9O76027 345 aa2.92□□□□□ -1.94
SNRNP27-204ENST00000487029 CXCL10P02778 98 aa2.92□□□□□ -1.94
SNRNP27-204ENST00000487029 PGK2P07205 417 aa2.92□□□□□ -1.94
SNRNP27-204ENST00000487029 APRTP07741 180 aa2.92□□□□□ -1.94
SNRNP27-204ENST00000487029 FHP07954 510 aa2.92□□□□□ -1.94
SNRNP27-204ENST00000487029 ADORA3P0DMS8 318 aa2.92□□□□□ -1.94
SNRNP27-204ENST00000487029 CD1DP15813 335 aa2.92□□□□□ -1.94
SNRNP27-204ENST00000487029 GAP43P17677 238 aa2.92□□□□□ -1.94
SNRNP27-204ENST00000487029 ACP1P24666 158 aa2.92□□□□□ -1.94
SNRNP27-204ENST00000487029 SFNP31947 248 aa2.92□□□□□ -1.94
SNRNP27-204ENST00000487029 LIMK2P53671 638 aa2.92□□□□□ -1.94
SNRNP27-204ENST00000487029 SSTP61278 116 aa2.92□□□□□ -1.94
SNRNP27-204ENST00000487029 RPL27P61353 136 aaKnown RBP2.92□□□□□ -1.94
SNRNP27-204ENST00000487029 CDKL1Q00532 357 aa2.92□□□□□ -1.94
SNRNP27-204ENST00000487029 FKBP3Q00688 224 aaKnown RBP2.92□□□□□ -1.94
SNRNP27-204ENST00000487029 LY6DQ14210 128 aa2.92□□□□□ -1.94
SNRNP27-204ENST00000487029 GAMTQ14353 236 aa2.92□□□□□ -1.94
SNRNP27-204ENST00000487029 EXOSC7Q15024 291 aaKnown RBP2.92□□□□□ -1.94
SNRNP27-204ENST00000487029 TRADDQ15628 312 aa2.92□□□□□ -1.94
SNRNP27-204ENST00000487029 LPAL2Q16609 132 aa2.92□□□□□ -1.94
SNRNP27-204ENST00000487029 ECSCRQ19T08 205 aa2.92□□□□□ -1.94
SNRNP27-204ENST00000487029 KNOP1Q1ED39 458 aaKnown RBP2.92□□□□□ -1.94
SNRNP27-204ENST00000487029 CCDC40Q4G0X9 1142 aa2.92□□□□□ -1.94
SNRNP27-204ENST00000487029 GPAT3Q53EU6 434 aa2.92□□□□□ -1.94
SNRNP27-204ENST00000487029 TAF1BQ53T94 588 aaPredicted RBP2.92□□□□□ -1.94
SNRNP27-204ENST00000487029 HERC4Q5GLZ8 1057 aaPredicted RBP2.92□□□□□ -1.94
SNRNP27-204ENST00000487029 HIST2H2AA3Q6FI13 130 aa2.92□□□□□ -1.94
SNRNP27-204ENST00000487029 NEK5Q6P3R8 708 aa2.92□□□□□ -1.94
SNRNP27-204ENST00000487029 Q6ZRG5 221 aa2.92□□□□□ -1.94
SNRNP27-204ENST00000487029 ITIH5Q86UX2 942 aa2.92□□□□□ -1.94
SNRNP27-204ENST00000487029 ZSCAN30Q86W11 494 aa2.92□□□□□ -1.94
SNRNP27-204ENST00000487029 KCNMB4Q86W47 210 aa2.92□□□□□ -1.94
SNRNP27-204ENST00000487029 CARM1Q86X55 608 aa2.92□□□□□ -1.94
SNRNP27-204ENST00000487029 SPAG16Q8N0X2 631 aa2.92□□□□□ -1.94
SNRNP27-204ENST00000487029 PARP8Q8N3A8 854 aa2.92□□□□□ -1.94
SNRNP27-204ENST00000487029 GVQW1Q8N7I0 195 aa2.92□□□□□ -1.94
SNRNP27-204ENST00000487029 Q8NBF4 154 aa2.92□□□□□ -1.94
SNRNP27-204ENST00000487029 TMEM186Q96B77 213 aa2.92□□□□□ -1.94
SNRNP27-204ENST00000487029 NSMCE2Q96MF7 247 aa2.92□□□□□ -1.94
SNRNP27-204ENST00000487029 RUNDC3BQ96NL0 473 aa2.92□□□□□ -1.94
SNRNP27-204ENST00000487029 CXXC4Q9H2H0 198 aa2.92□□□□□ -1.94
SNRNP27-204ENST00000487029 WDR41Q9HAD4 459 aa2.92□□□□□ -1.94
SNRNP27-204ENST00000487029 THAP10Q9P2Z0 257 aaPredicted RBP2.92□□□□□ -1.94
SNRNP27-204ENST00000487029 COPS7AQ9UBW8 275 aa2.92□□□□□ -1.94
SNRNP27-204ENST00000487029 DIMT1Q9UNQ2 313 aaKnown RBP2.92□□□□□ -1.94
SNRNP27-204ENST00000487029 KRT87PA6NCN2 255 aa2.91□□□□□ -1.94
SNRNP27-204ENST00000487029 CFAP73A6NFT4 308 aa2.91□□□□□ -1.94
SNRNP27-204ENST00000487029 ASB14A6NK59 587 aa2.91□□□□□ -1.94
SNRNP27-204ENST00000487029 NEDD8-MDP1E9PL57 170 aa2.91□□□□□ -1.94
SNRNP27-204ENST00000487029 FBP2O00757 339 aa2.91□□□□□ -1.94
SNRNP27-204ENST00000487029 ZNF749O43361 778 aa2.91□□□□□ -1.94
SNRNP27-204ENST00000487029 LRP3O75074 770 aa2.91□□□□□ -1.94
SNRNP27-204ENST00000487029 REC8O95072 547 aa2.91□□□□□ -1.94
SNRNP27-204ENST00000487029 HIST1H2AGP0C0S8 130 aaPredicted RBP2.91□□□□□ -1.94
SNRNP27-204ENST00000487029 PPP2R1AP30153 589 aa2.91□□□□□ -1.94
SNRNP27-204ENST00000487029 ACADSBP45954 432 aa2.91□□□□□ -1.94
SNRNP27-204ENST00000487029 CCL11P51671 97 aa2.91□□□□□ -1.94
SNRNP27-204ENST00000487029 PEX3P56589 373 aa2.91□□□□□ -1.94
SNRNP27-204ENST00000487029 SRPXP78539 464 aa2.91□□□□□ -1.94
SNRNP27-204ENST00000487029 FASTKQ14296 549 aaKnown RBP2.91□□□□□ -1.94
SNRNP27-204ENST00000487029 ZNF146Q15072 292 aa2.91□□□□□ -1.94
SNRNP27-204ENST00000487029 P2RY14Q15391 338 aa2.91□□□□□ -1.94
SNRNP27-204ENST00000487029 TOR1AIP1Q5JTV8 583 aa2.91□□□□□ -1.94
SNRNP27-204ENST00000487029 TEX35Q5T0J7 233 aa2.91□□□□□ -1.94
SNRNP27-204ENST00000487029 DCAF12Q5T6F0 453 aa2.91□□□□□ -1.94
SNRNP27-204ENST00000487029 DDI2Q5TDH0 399 aa2.91□□□□□ -1.94
SNRNP27-204ENST00000487029 CDC42EP5Q6NZY7 148 aa2.91□□□□□ -1.94
SNRNP27-204ENST00000487029 MFSD7Q6UXD7 560 aa2.91□□□□□ -1.94
SNRNP27-204ENST00000487029 WDR88Q6ZMY6 472 aa2.91□□□□□ -1.94
SNRNP27-204ENST00000487029 CDHR3Q6ZTQ4 885 aa2.91□□□□□ -1.94
SNRNP27-204ENST00000487029 MCM10Q7L590 875 aa2.91□□□□□ -1.94
SNRNP27-204ENST00000487029 TAF8Q7Z7C8 310 aa2.91□□□□□ -1.94
SNRNP27-204ENST00000487029 FAM131BQ86XD5 332 aa2.91□□□□□ -1.94
SNRNP27-204ENST00000487029 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.91□□□□□ -1.94
SNRNP27-204ENST00000487029 KDM8Q8N371 416 aa2.91□□□□□ -1.94
SNRNP27-204ENST00000487029 MRPL43Q8N983 215 aaKnown RBP2.91□□□□□ -1.94
SNRNP27-204ENST00000487029 COLGALT1Q8NBJ5 622 aa2.91□□□□□ -1.94
SNRNP27-204ENST00000487029 LRRC15Q8TF66 581 aa2.91□□□□□ -1.94
SNRNP27-204ENST00000487029 PCNPQ8WW12 178 aaKnown RBP2.91□□□□□ -1.94
SNRNP27-204ENST00000487029 HIST1H2ACQ93077 130 aa2.91□□□□□ -1.94
SNRNP27-204ENST00000487029 ESAMQ96AP7 390 aa2.91□□□□□ -1.94
SNRNP27-204ENST00000487029 CDHR1Q96JP9 859 aa2.91□□□□□ -1.94
SNRNP27-204ENST00000487029 SLC45A3Q96JT2 553 aa2.91□□□□□ -1.94
SNRNP27-204ENST00000487029 C18orf12Q96KH6 178 aa2.91□□□□□ -1.94
SNRNP27-204ENST00000487029 TNFRSF13CQ96RJ3 184 aa2.91□□□□□ -1.94
SNRNP27-204ENST00000487029 JPH2Q9BR39 696 aaPredicted RBP2.91□□□□□ -1.94
SNRNP27-204ENST00000487029 PYGO2Q9BRQ0 406 aa2.91□□□□□ -1.94
SNRNP27-204ENST00000487029 STRADBQ9C0K7 418 aa2.91□□□□□ -1.94
SNRNP27-204ENST00000487029 C1orf21Q9H246 121 aa2.91□□□□□ -1.94
SNRNP27-204ENST00000487029 HOMER3Q9NSC5 361 aa2.91□□□□□ -1.94
SNRNP27-204ENST00000487029 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP2.91□□□□□ -1.94
SNRNP27-204ENST00000487029 NINJ2Q9NZG7 142 aa2.91□□□□□ -1.94
SNRNP27-204ENST00000487029 ERVK-18Q9QC07 812 aa2.91□□□□□ -1.94
SNRNP27-204ENST00000487029 NIP7Q9Y221 180 aaKnown RBP eCLIP2.91□□□□□ -1.94
SNRNP27-204ENST00000487029 A0A0J9YWU9 116 aa2.9□□□□□ -1.95
SNRNP27-204ENST00000487029 LOC390937A0A1W2PQ73 354 aa2.9□□□□□ -1.95
SNRNP27-204ENST00000487029 IGLON5A6NGN9 336 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms