RNA–Protein interactions for RNA: ENST00000486978.5

CTDSPL-208, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 609 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-208ENST00000486978 PHF21BQ96EK2 531 aa5.98□□□□□ -1.45
CTDSPL-208ENST00000486978 SIGLEC12Q96PQ1 595 aa5.98□□□□□ -1.45
CTDSPL-208ENST00000486978 CSF3RQ99062 836 aa5.98□□□□□ -1.45
CTDSPL-208ENST00000486978 MTERF1Q99551 399 aaKnown RBP5.98□□□□□ -1.45
CTDSPL-208ENST00000486978 MAPKAP1Q9BPZ7 522 aa5.98□□□□□ -1.45
CTDSPL-208ENST00000486978 RHOXF2Q9BQY4 288 aa5.98□□□□□ -1.45
CTDSPL-208ENST00000486978 UTP23Q9BRU9 249 aaKnown RBP5.98□□□□□ -1.45
CTDSPL-208ENST00000486978 CENPKQ9BS16 269 aa5.98□□□□□ -1.45
CTDSPL-208ENST00000486978 MRPL46Q9H2W6 279 aaKnown RBP5.98□□□□□ -1.45
CTDSPL-208ENST00000486978 OR51B5Q9H339 312 aa5.98□□□□□ -1.45
CTDSPL-208ENST00000486978 IPPKQ9H8X2 491 aa5.98□□□□□ -1.45
CTDSPL-208ENST00000486978 ADAP2Q9NPF8 381 aa5.98□□□□□ -1.45
CTDSPL-208ENST00000486978 DMRT3Q9NQL9 472 aa5.98□□□□□ -1.45
CTDSPL-208ENST00000486978 PNO1Q9NRX1 252 aaKnown RBP5.98□□□□□ -1.45
CTDSPL-208ENST00000486978 DNAJB12Q9NXW2 375 aaKnown RBP5.98□□□□□ -1.45
CTDSPL-208ENST00000486978 KCMF1Q9P0J7 381 aa5.98□□□□□ -1.45
CTDSPL-208ENST00000486978 XPR1Q9UBH6 696 aa5.98□□□□□ -1.45
CTDSPL-208ENST00000486978 PPIEQ9UNP9 301 aaKnown RBP5.98□□□□□ -1.45
CTDSPL-208ENST00000486978 HRH3Q9Y5N1 445 aa5.98□□□□□ -1.45
CTDSPL-208ENST00000486978 SPACA6W5XKT8 324 aa5.98□□□□□ -1.45
CTDSPL-208ENST00000486978 TRBV11-1A0A0K0K1C0 115 aa5.97□□□□□ -1.45
CTDSPL-208ENST00000486978 RNF212BA8MTL3 300 aa5.97□□□□□ -1.45
CTDSPL-208ENST00000486978 FOXE1O00358 373 aaPredicted RBP5.97□□□□□ -1.45
CTDSPL-208ENST00000486978 SAP18O00422 153 aaKnown RBP5.97□□□□□ -1.45
CTDSPL-208ENST00000486978 PLPP1O14494 284 aa5.97□□□□□ -1.45
CTDSPL-208ENST00000486978 FCHO1O14526 889 aa5.97□□□□□ -1.45
CTDSPL-208ENST00000486978 OR7A17O14581 309 aa5.97□□□□□ -1.45
CTDSPL-208ENST00000486978 KCNAB3O43448 404 aa5.97□□□□□ -1.45
CTDSPL-208ENST00000486978 TOXO94900 526 aa5.97□□□□□ -1.45
CTDSPL-208ENST00000486978 CLDN9O95484 217 aa5.97□□□□□ -1.45
CTDSPL-208ENST00000486978 IFNA16P05015 189 aa5.97□□□□□ -1.45
CTDSPL-208ENST00000486978 FAM153BP0C7A2 387 aa5.97□□□□□ -1.45
CTDSPL-208ENST00000486978 CPN2P22792 545 aa5.97□□□□□ -1.45
CTDSPL-208ENST00000486978 PTX3P26022 381 aaPredicted RBP5.97□□□□□ -1.45
CTDSPL-208ENST00000486978 GCAP28676 217 aa5.97□□□□□ -1.45
CTDSPL-208ENST00000486978 TPP2P29144 1249 aaPredicted RBP5.97□□□□□ -1.45
CTDSPL-208ENST00000486978 PPP2R1BP30154 601 aa5.97□□□□□ -1.45
CTDSPL-208ENST00000486978 TRHRP34981 398 aaPredicted RBP5.97□□□□□ -1.45
CTDSPL-208ENST00000486978 ARL1P40616 181 aaPredicted RBP5.97□□□□□ -1.45
CTDSPL-208ENST00000486978 ST13P50502 369 aaKnown RBP5.97□□□□□ -1.45
CTDSPL-208ENST00000486978 CCNG1P51959 295 aa5.97□□□□□ -1.45
CTDSPL-208ENST00000486978 ARFIP1P53367 373 aa5.97□□□□□ -1.45
CTDSPL-208ENST00000486978 MLF1P58340 268 aa5.97□□□□□ -1.45
CTDSPL-208ENST00000486978 RPS13P62277 151 aaKnown RBP5.97□□□□□ -1.45
CTDSPL-208ENST00000486978 STX4Q12846 297 aa5.97□□□□□ -1.45
CTDSPL-208ENST00000486978 SNTB1Q13884 538 aaKnown RBP5.97□□□□□ -1.45
CTDSPL-208ENST00000486978 SERTAD2Q14140 314 aa5.97□□□□□ -1.45
CTDSPL-208ENST00000486978 ELAVL1Q15717 326 aaKnown RBP5.97□□□□□ -1.45
CTDSPL-208ENST00000486978 CPSF6Q16630 551 aaKnown RBP eCLIP5.97□□□□□ -1.45
CTDSPL-208ENST00000486978 FAM153CQ494X1 144 aa5.97□□□□□ -1.45
CTDSPL-208ENST00000486978 SPINK14Q6IE38 97 aa5.97□□□□□ -1.45
CTDSPL-208ENST00000486978 OR4C11Q6IEV9 310 aa5.97□□□□□ -1.45
CTDSPL-208ENST00000486978 TIFABQ6ZNK6 161 aa5.97□□□□□ -1.45
CTDSPL-208ENST00000486978 Q6ZPB1 254 aaPredicted RBP5.97□□□□□ -1.45
CTDSPL-208ENST00000486978 FGD2Q7Z6J4 655 aa5.97□□□□□ -1.45
CTDSPL-208ENST00000486978 CNPY4Q8N129 248 aa5.97□□□□□ -1.45
CTDSPL-208ENST00000486978 TMEM132CQ8N3T6 1108 aa5.97□□□□□ -1.45
CTDSPL-208ENST00000486978 ZCCHC7Q8N3Z6 543 aaKnown RBP5.97□□□□□ -1.45
CTDSPL-208ENST00000486978 EIF1ADQ8N9N8 165 aaKnown RBP5.97□□□□□ -1.45
CTDSPL-208ENST00000486978 TMEM178AQ8NBL3 297 aa5.97□□□□□ -1.45
CTDSPL-208ENST00000486978 FAM98AQ8NCA5 519 aaKnown RBP5.97□□□□□ -1.45
CTDSPL-208ENST00000486978 C7orf57Q8NEG2 295 aa5.97□□□□□ -1.45
CTDSPL-208ENST00000486978 WDR20Q8TBZ3 569 aa5.97□□□□□ -1.45
CTDSPL-208ENST00000486978 DAZLQ92904 295 aaKnown RBP5.97□□□□□ -1.45
CTDSPL-208ENST00000486978 NCLNQ969V3 563 aa5.97□□□□□ -1.45
CTDSPL-208ENST00000486978 ATP6V1E2Q96A05 226 aa5.97□□□□□ -1.45
CTDSPL-208ENST00000486978 SDCCAG3Q96C92 435 aa5.97□□□□□ -1.45
CTDSPL-208ENST00000486978 VMP1Q96GC9 406 aa5.97□□□□□ -1.45
CTDSPL-208ENST00000486978 SCMH1Q96GD3 660 aa5.97□□□□□ -1.45
CTDSPL-208ENST00000486978 ALPK1Q96QP1 1244 aa5.97□□□□□ -1.45
CTDSPL-208ENST00000486978 DMRTA2Q96SC8 542 aa5.97□□□□□ -1.45
CTDSPL-208ENST00000486978 MRPL57Q9BQC6 102 aaKnown RBP5.97□□□□□ -1.45
CTDSPL-208ENST00000486978 CCDC77Q9BR77 488 aa5.97□□□□□ -1.45
CTDSPL-208ENST00000486978 ZNF559Q9BR84 538 aa5.97□□□□□ -1.45
CTDSPL-208ENST00000486978 NTMT1Q9BV86 223 aa5.97□□□□□ -1.45
CTDSPL-208ENST00000486978 ALOXE3Q9BYJ1 711 aa5.97□□□□□ -1.45
CTDSPL-208ENST00000486978 DEFB126Q9BYW3 111 aa5.97□□□□□ -1.45
CTDSPL-208ENST00000486978 TXLNGYQ9BZA5 131 aa5.97□□□□□ -1.45
CTDSPL-208ENST00000486978 TSPAN10Q9H1Z9 355 aaPredicted RBP5.97□□□□□ -1.45
CTDSPL-208ENST00000486978 NOL11Q9H8H0 719 aaKnown RBP5.97□□□□□ -1.45
CTDSPL-208ENST00000486978 TRIM45Q9H8W5 580 aaPredicted RBP5.97□□□□□ -1.45
CTDSPL-208ENST00000486978 KLHL1Q9NR64 748 aa5.97□□□□□ -1.45
CTDSPL-208ENST00000486978 MS4A12Q9NXJ0 267 aa5.97□□□□□ -1.45
CTDSPL-208ENST00000486978 ANKRD10Q9NXR5 420 aa5.97□□□□□ -1.45
CTDSPL-208ENST00000486978 PSD3Q9NYI0 1048 aa5.97□□□□□ -1.45
CTDSPL-208ENST00000486978 LRFN1Q9P244 771 aa5.97□□□□□ -1.45
CTDSPL-208ENST00000486978 VTI1BQ9UEU0 232 aa5.97□□□□□ -1.45
CTDSPL-208ENST00000486978 FETUBQ9UGM5 382 aa5.97□□□□□ -1.45
CTDSPL-208ENST00000486978 PHF11Q9UIL8 331 aa5.97□□□□□ -1.45
CTDSPL-208ENST00000486978 ZNF223Q9UK11 482 aaPredicted RBP5.97□□□□□ -1.45
CTDSPL-208ENST00000486978 PCTPQ9UKL6 214 aa5.97□□□□□ -1.45
CTDSPL-208ENST00000486978 FBXW2Q9UKT8 454 aa5.97□□□□□ -1.45
CTDSPL-208ENST00000486978 PPT2Q9UMR5 302 aa5.97□□□□□ -1.45
CTDSPL-208ENST00000486978 RNF11Q9Y3C5 154 aa5.97□□□□□ -1.45
CTDSPL-208ENST00000486978 CLCA3PQ9Y6N3 262 aa5.97□□□□□ -1.45
CTDSPL-208ENST00000486978 SONP18583 2426 aaKnown RBP5.97□□□□□ -1.45
CTDSPL-208ENST00000486978 PRKDCP78527 4128 aaKnown RBP5.96□□□□□ -1.45
CTDSPL-208ENST00000486978 MPDZO75970 2070 aa5.96□□□□□ -1.46
CTDSPL-208ENST00000486978 A0A0A6YYD5 115 aa5.96□□□□□ -1.46
CTDSPL-208ENST00000486978 IQANK1A0A1B0GTG1 560 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms