RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 MPEG1Q2M385 716 aa12□□□□□ -0.49
HDAC6-229ENST00000486665 PGS1Q32NB8 556 aa12□□□□□ -0.49
HDAC6-229ENST00000486665 LINC00303Q3SY05 128 aa12□□□□□ -0.49
HDAC6-229ENST00000486665 AGKQ53H12 422 aa12□□□□□ -0.49
HDAC6-229ENST00000486665 SLC48A1Q6P1K1 146 aa12□□□□□ -0.49
HDAC6-229ENST00000486665 CCDC81Q6ZN84 652 aa12□□□□□ -0.49
HDAC6-229ENST00000486665 ZNF595Q8IYB9 648 aa12□□□□□ -0.49
HDAC6-229ENST00000486665 CACNA2D3Q8IZS8 1091 aa12□□□□□ -0.49
HDAC6-229ENST00000486665 ENDOVQ8N8Q3 282 aaKnown RBP12□□□□□ -0.49
HDAC6-229ENST00000486665 ADAMTS18Q8TE60 1221 aa12□□□□□ -0.49
HDAC6-229ENST00000486665 TANKQ92844 425 aa12□□□□□ -0.49
HDAC6-229ENST00000486665 FKBP10Q96AY3 582 aa12□□□□□ -0.49
HDAC6-229ENST00000486665 EXOSC8Q96B26 276 aaKnown RBP12□□□□□ -0.49
HDAC6-229ENST00000486665 COQ8BQ96D53 544 aa12□□□□□ -0.49
HDAC6-229ENST00000486665 SPSB2Q99619 263 aa12□□□□□ -0.49
HDAC6-229ENST00000486665 CCDC106Q9BWC9 280 aa12□□□□□ -0.49
HDAC6-229ENST00000486665 CLMPQ9H6B4 373 aa12□□□□□ -0.49
HDAC6-229ENST00000486665 WDR41Q9HAD4 459 aa12□□□□□ -0.49
HDAC6-229ENST00000486665 NECTIN3Q9NQS3 549 aa12□□□□□ -0.49
HDAC6-229ENST00000486665 PRTFDC1Q9NRG1 225 aa12□□□□□ -0.49
HDAC6-229ENST00000486665 SH3BP4Q9P0V3 963 aa12□□□□□ -0.49
HDAC6-229ENST00000486665 CROTQ9UKG9 612 aa12□□□□□ -0.49
HDAC6-229ENST00000486665 CLDN16Q9Y5I7 305 aa12□□□□□ -0.49
HDAC6-229ENST00000486665 COL12A1Q99715 3063 aa12□□□□□ -0.49
HDAC6-229ENST00000486665 SDK2Q58EX2 2172 aa11.99□□□□□ -0.49
HDAC6-229ENST00000486665 C9J4A7 227 aa11.99□□□□□ -0.49
HDAC6-229ENST00000486665 SLC28A2O43868 658 aa11.99□□□□□ -0.49
HDAC6-229ENST00000486665 FGF17O60258 216 aa11.99□□□□□ -0.49
HDAC6-229ENST00000486665 TBX19O60806 448 aa11.99□□□□□ -0.49
HDAC6-229ENST00000486665 KLF7O75840 302 aaPredicted RBP11.99□□□□□ -0.49
HDAC6-229ENST00000486665 GPR75O95800 540 aa11.99□□□□□ -0.49
HDAC6-229ENST00000486665 RAB40ALP0C0E4 278 aa11.99□□□□□ -0.49
HDAC6-229ENST00000486665 C8orf89P0DMQ9 161 aa11.99□□□□□ -0.49
HDAC6-229ENST00000486665 COX7A2P14406 83 aa11.99□□□□□ -0.49
HDAC6-229ENST00000486665 MAOAP21397 527 aa11.99□□□□□ -0.49
HDAC6-229ENST00000486665 PIK3R1P27986 724 aa11.99□□□□□ -0.49
HDAC6-229ENST00000486665 HPCAL1P37235 193 aa11.99□□□□□ -0.49
HDAC6-229ENST00000486665 STAT5AP42229 794 aa11.99□□□□□ -0.49
HDAC6-229ENST00000486665 POLR2JP52435 117 aaKnown RBP11.99□□□□□ -0.49
HDAC6-229ENST00000486665 WNT3P56703 355 aa11.99□□□□□ -0.49
HDAC6-229ENST00000486665 IRX1P78414 480 aaPredicted RBP11.99□□□□□ -0.49
HDAC6-229ENST00000486665 FOLH1Q04609 750 aa11.99□□□□□ -0.49
HDAC6-229ENST00000486665 DUSP2Q05923 314 aa11.99□□□□□ -0.49
HDAC6-229ENST00000486665 ACTN3Q08043 901 aaPredicted RBP11.99□□□□□ -0.49
HDAC6-229ENST00000486665 MINDY4Q4G0A6 757 aa11.99□□□□□ -0.49
HDAC6-229ENST00000486665 SPANXN4Q5MJ08 99 aa11.99□□□□□ -0.49
HDAC6-229ENST00000486665 CPTPQ5TA50 214 aa11.99□□□□□ -0.49
HDAC6-229ENST00000486665 MFSD4BQ5TF39 518 aa11.99□□□□□ -0.49
HDAC6-229ENST00000486665 OR52E8Q6IFG1 317 aa11.99□□□□□ -0.49
HDAC6-229ENST00000486665 GK5Q6ZS86 529 aa11.99□□□□□ -0.49
HDAC6-229ENST00000486665 TREML1Q86YW5 311 aa11.99□□□□□ -0.49
HDAC6-229ENST00000486665 SCUBE1Q8IWY4 988 aa11.99□□□□□ -0.49
HDAC6-229ENST00000486665 FAM9CQ8IZT9 166 aa11.99□□□□□ -0.49
HDAC6-229ENST00000486665 TSLPQ969D9 159 aa11.99□□□□□ -0.49
HDAC6-229ENST00000486665 CIDECQ96AQ7 238 aaPredicted RBP11.99□□□□□ -0.49
HDAC6-229ENST00000486665 PPCDCQ96CD2 204 aa11.99□□□□□ -0.49
HDAC6-229ENST00000486665 MTERF3Q96E29 417 aa11.99□□□□□ -0.49
HDAC6-229ENST00000486665 ZNF681Q96N22 645 aa11.99□□□□□ -0.49
HDAC6-229ENST00000486665 ZBTB18Q99592 522 aa11.99□□□□□ -0.49
HDAC6-229ENST00000486665 VN1R1Q9GZP7 353 aa11.99□□□□□ -0.49
HDAC6-229ENST00000486665 WDR54Q9H977 334 aa11.99□□□□□ -0.49
HDAC6-229ENST00000486665 SLC52A3Q9NQ40 469 aa11.99□□□□□ -0.49
HDAC6-229ENST00000486665 MIEF1Q9NQG6 463 aa11.99□□□□□ -0.49
HDAC6-229ENST00000486665 TAS2R7Q9NYW3 318 aa11.99□□□□□ -0.49
HDAC6-229ENST00000486665 EHD3Q9NZN3 535 aa11.99□□□□□ -0.49
HDAC6-229ENST00000486665 CCDC167Q9P0B6 97 aa11.99□□□□□ -0.49
HDAC6-229ENST00000486665 UTS2RQ9UKP6 389 aa11.99□□□□□ -0.49
HDAC6-229ENST00000486665 MKL2Q9ULH7 1088 aa11.99□□□□□ -0.49
HDAC6-229ENST00000486665 FARSAQ9Y285 508 aaKnown RBP11.99□□□□□ -0.49
HDAC6-229ENST00000486665 MRPS33Q9Y291 106 aaKnown RBP11.99□□□□□ -0.49
HDAC6-229ENST00000486665 PTPN13Q12923 2485 aa11.99□□□□□ -0.49
HDAC6-229ENST00000486665 FLNCQ14315 2725 aa11.98□□□□□ -0.49
HDAC6-229ENST00000486665 SEC16AO15027 2179 aa11.98□□□□□ -0.49
HDAC6-229ENST00000486665 FAM234BA2RU67 622 aa11.98□□□□□ -0.49
HDAC6-229ENST00000486665 CLDN4O14493 209 aa11.98□□□□□ -0.49
HDAC6-229ENST00000486665 ERAL1O75616 437 aaKnown RBP11.98□□□□□ -0.49
HDAC6-229ENST00000486665 HEXBP07686 556 aa11.98□□□□□ -0.49
HDAC6-229ENST00000486665 UMODP07911 640 aa11.98□□□□□ -0.49
HDAC6-229ENST00000486665 PCSK2P16519 638 aa11.98□□□□□ -0.49
HDAC6-229ENST00000486665 EFNA1P20827 205 aaPredicted RBP11.98□□□□□ -0.49
HDAC6-229ENST00000486665 DLSTP36957 453 aa11.98□□□□□ -0.49
HDAC6-229ENST00000486665 FEN1P39748 380 aaKnown RBP11.98□□□□□ -0.49
HDAC6-229ENST00000486665 XKP51811 444 aa11.98□□□□□ -0.49
HDAC6-229ENST00000486665 CLNS1AP54105 237 aaKnown RBP11.98□□□□□ -0.49
HDAC6-229ENST00000486665 EMP2P54851 167 aa11.98□□□□□ -0.49
HDAC6-229ENST00000486665 HSD17B7P56937 341 aa11.98□□□□□ -0.49
HDAC6-229ENST00000486665 RPS18P62269 152 aaKnown RBP11.98□□□□□ -0.49
HDAC6-229ENST00000486665 SLC13A2Q13183 592 aa11.98□□□□□ -0.49
HDAC6-229ENST00000486665 DNASE1L3Q13609 305 aa11.98□□□□□ -0.49
HDAC6-229ENST00000486665 FAAH2Q6GMR7 532 aa11.98□□□□□ -0.49
HDAC6-229ENST00000486665 OR4F3Q6IEY1 312 aa11.98□□□□□ -0.49
HDAC6-229ENST00000486665 BLOC1S3Q6QNY0 202 aa11.98□□□□□ -0.49
HDAC6-229ENST00000486665 QSOX2Q6ZRP7 698 aa11.98□□□□□ -0.49
HDAC6-229ENST00000486665 R3HCC1LQ7Z5L2 792 aaKnown RBP11.98□□□□□ -0.49
HDAC6-229ENST00000486665 CAMKMTQ7Z624 323 aa11.98□□□□□ -0.49
HDAC6-229ENST00000486665 FITM2Q8N6M3 262 aa11.98□□□□□ -0.49
HDAC6-229ENST00000486665 GLB1L3Q8NCI6 653 aaPredicted RBP11.98□□□□□ -0.49
HDAC6-229ENST00000486665 PLPP5Q8NEB5 264 aa11.98□□□□□ -0.49
HDAC6-229ENST00000486665 OR4K14Q8NGD5 310 aa11.98□□□□□ -0.49
HDAC6-229ENST00000486665 TESCQ96BS2 214 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms