RNA–Protein interactions for RNA: ENST00000486148.1

TNXB-205, Transcript of tenascin XB, humanhuman

TSL 1 (best)

Gene TNXB, Length 2,669 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-205ENST00000486148 C11orf16Q9NQ32 467 aa16.66■□□□□ 0.26
TNXB-205ENST00000486148 TCF20Q9UGU0 1960 aaKnown RBP16.66■□□□□ 0.26
TNXB-205ENST00000486148 EFCAB10A6NFE3 127 aa16.66■□□□□ 0.26
TNXB-205ENST00000486148 AP3D1O14617 1153 aa16.66■□□□□ 0.26
TNXB-205ENST00000486148 B4GALT2O60909 372 aa16.66■□□□□ 0.26
TNXB-205ENST00000486148 PRKACBP22694 351 aa16.66■□□□□ 0.26
TNXB-205ENST00000486148 FEN1P39748 380 aaKnown RBP16.66■□□□□ 0.26
TNXB-205ENST00000486148 ALDH9A1P49189 494 aa16.66■□□□□ 0.26
TNXB-205ENST00000486148 ST8SIA6P61647 398 aa16.66■□□□□ 0.26
TNXB-205ENST00000486148 SEC23BQ15437 767 aa16.66■□□□□ 0.26
TNXB-205ENST00000486148 SAXO2Q658L1 398 aa16.66■□□□□ 0.26
TNXB-205ENST00000486148 ATCAYQ86WG3 371 aa16.66■□□□□ 0.26
TNXB-205ENST00000486148 OR2L2Q8NH16 312 aa16.66■□□□□ 0.26
TNXB-205ENST00000486148 SETD7Q8WTS6 366 aaKnown RBP16.66■□□□□ 0.26
TNXB-205ENST00000486148 RAB8BQ92930 207 aa16.66■□□□□ 0.26
TNXB-205ENST00000486148 UBE2E3Q969T4 207 aa16.66■□□□□ 0.26
TNXB-205ENST00000486148 LINC00615Q96LM1 132 aaPredicted RBP16.66■□□□□ 0.26
TNXB-205ENST00000486148 F2RL3Q96RI0 385 aa16.66■□□□□ 0.26
TNXB-205ENST00000486148 OR52A5Q9H2C5 316 aa16.66■□□□□ 0.26
TNXB-205ENST00000486148 FBXL12Q9NXK8 326 aa16.66■□□□□ 0.26
TNXB-205ENST00000486148 KLK4Q9Y5K2 254 aa16.66■□□□□ 0.26
TNXB-205ENST00000486148 ARRDC5A6NEK1 342 aa16.65■□□□□ 0.26
TNXB-205ENST00000486148 ANKDD1BA6NHY2 528 aa16.65■□□□□ 0.26
TNXB-205ENST00000486148 SAGE2PA6NJ88 616 aa16.65■□□□□ 0.26
TNXB-205ENST00000486148 PRRT4C9JH25 899 aa16.65■□□□□ 0.26
TNXB-205ENST00000486148 KIAA0513O60268 411 aa16.65■□□□□ 0.26
TNXB-205ENST00000486148 DDCP20711 480 aa16.65■□□□□ 0.26
TNXB-205ENST00000486148 OLR1P78380 273 aa16.65■□□□□ 0.26
TNXB-205ENST00000486148 PNCKQ6P2M8 343 aa16.65■□□□□ 0.26
TNXB-205ENST00000486148 WDR53Q7Z5U6 358 aaPredicted RBP16.65■□□□□ 0.26
TNXB-205ENST00000486148 ANKRD53Q8N9V6 530 aa16.65■□□□□ 0.26
TNXB-205ENST00000486148 WDR36Q8NI36 951 aaKnown RBP16.65■□□□□ 0.26
TNXB-205ENST00000486148 TM4SF18Q96CE8 201 aa16.65■□□□□ 0.26
TNXB-205ENST00000486148 NEURL3Q96EH8 262 aa16.65■□□□□ 0.26
TNXB-205ENST00000486148 TMEM19Q96HH6 336 aa16.65■□□□□ 0.26
TNXB-205ENST00000486148 DMRTB1Q96MA1 342 aa16.65■□□□□ 0.26
TNXB-205ENST00000486148 WFDC6Q9BQY6 131 aa16.65■□□□□ 0.26
TNXB-205ENST00000486148 DPEP2Q9H4A9 486 aa16.65■□□□□ 0.26
TNXB-205ENST00000486148 CLN6Q9NWW5 311 aa16.65■□□□□ 0.26
TNXB-205ENST00000486148 DSPPQ9NZW4 1301 aa16.65■□□□□ 0.26
TNXB-205ENST00000486148 KIF26AQ9ULI4 1882 aaPredicted RBP16.65■□□□□ 0.26
TNXB-205ENST00000486148 SH3D21A4FU49 640 aa16.65■□□□□ 0.26
TNXB-205ENST00000486148 LZTS3O60299 673 aaPredicted RBP16.65■□□□□ 0.26
TNXB-205ENST00000486148 ENTPD6O75354 484 aa16.65■□□□□ 0.26
TNXB-205ENST00000486148 SOX14O95416 240 aa16.65■□□□□ 0.26
TNXB-205ENST00000486148 FGF19O95750 216 aa16.65■□□□□ 0.26
TNXB-205ENST00000486148 S100A5P33763 92 aa16.65■□□□□ 0.26
TNXB-205ENST00000486148 PRKCDQ05655 676 aa16.65■□□□□ 0.26
TNXB-205ENST00000486148 SSX1Q16384 188 aa16.65■□□□□ 0.26
TNXB-205ENST00000486148 ZNF697Q5TEC3 545 aa16.65■□□□□ 0.26
TNXB-205ENST00000486148 PLAG1Q6DJT9 500 aa16.65■□□□□ 0.26
TNXB-205ENST00000486148 C19orf48Q6RUI8 117 aa16.65■□□□□ 0.26
TNXB-205ENST00000486148 LCTLQ6UWM7 567 aa16.65■□□□□ 0.26
TNXB-205ENST00000486148 RBM45Q8IUH3 476 aaKnown RBP16.65■□□□□ 0.26
TNXB-205ENST00000486148 GALNT12Q8IXK2 581 aa16.65■□□□□ 0.26
TNXB-205ENST00000486148 C9orf43Q8TAL5 461 aaPredicted RBP16.65■□□□□ 0.26
TNXB-205ENST00000486148 OTUB2Q96DC9 234 aa16.65■□□□□ 0.26
TNXB-205ENST00000486148 DEPDC7Q96QD5 511 aa16.65■□□□□ 0.26
TNXB-205ENST00000486148 CUEDC1Q9NWM3 386 aaPredicted RBP16.65■□□□□ 0.26
TNXB-205ENST00000486148 CNOT2Q9NZN8 540 aaKnown RBP16.65■□□□□ 0.26
TNXB-205ENST00000486148 REV1Q9UBZ9 1251 aa16.65■□□□□ 0.26
TNXB-205ENST00000486148 SNX11Q9Y5W9 270 aa16.65■□□□□ 0.26
TNXB-205ENST00000486148 MN1Q10571 1320 aaPredicted RBP16.64■□□□□ 0.26
TNXB-205ENST00000486148 C17orf113A0A1B0GUU1 675 aa16.64■□□□□ 0.26
TNXB-205ENST00000486148 C5orf58C9J3I9 102 aa16.64■□□□□ 0.26
TNXB-205ENST00000486148 ARHGAP33O14559 1287 aa16.64■□□□□ 0.26
TNXB-205ENST00000486148 PRNPP04156 253 aa16.64■□□□□ 0.26
TNXB-205ENST00000486148 ADH5P11766 374 aa16.64■□□□□ 0.26
TNXB-205ENST00000486148 SLC15A1P46059 708 aa16.64■□□□□ 0.26
TNXB-205ENST00000486148 HTR3AP46098 478 aa16.64■□□□□ 0.26
TNXB-205ENST00000486148 MAPK12P53778 367 aa16.64■□□□□ 0.26
TNXB-205ENST00000486148 MANFP55145 182 aaKnown RBP16.64■□□□□ 0.26
TNXB-205ENST00000486148 HSPB3Q12988 150 aa16.64■□□□□ 0.26
TNXB-205ENST00000486148 NXNL2Q5VZ03 156 aa16.64■□□□□ 0.26
TNXB-205ENST00000486148 FAAH2Q6GMR7 532 aa16.64■□□□□ 0.26
TNXB-205ENST00000486148 GRASPQ7Z6J2 395 aaPredicted RBP16.64■□□□□ 0.26
TNXB-205ENST00000486148 SLC30A8Q8IWU4 369 aa16.64■□□□□ 0.26
TNXB-205ENST00000486148 CACTIN-AS1Q8N1I8 211 aa16.64■□□□□ 0.26
TNXB-205ENST00000486148 KRT78Q8N1N4 520 aa16.64■□□□□ 0.26
TNXB-205ENST00000486148 NATD1Q8N6N6 113 aa16.64■□□□□ 0.26
TNXB-205ENST00000486148 MRPL43Q8N983 215 aaKnown RBP16.64■□□□□ 0.26
TNXB-205ENST00000486148 TAC3Q9UHF0 121 aa16.64■□□□□ 0.26
TNXB-205ENST00000486148 ENOPH1Q9UHY7 261 aa16.64■□□□□ 0.26
TNXB-205ENST00000486148 CEBPBP17676 345 aa16.64■□□□□ 0.25
TNXB-205ENST00000486148 ITGB7P26010 798 aa16.64■□□□□ 0.25
TNXB-205ENST00000486148 VASPP50552 380 aaPredicted RBP16.64■□□□□ 0.25
TNXB-205ENST00000486148 ZNF45Q02386 682 aa16.64■□□□□ 0.25
TNXB-205ENST00000486148 ZFP69Q49AA0 526 aa16.64■□□□□ 0.25
TNXB-205ENST00000486148 Q5BKY6 102 aa16.64■□□□□ 0.25
TNXB-205ENST00000486148 C9orf64Q5T6V5 341 aa16.64■□□□□ 0.25
TNXB-205ENST00000486148 KHDRBS2Q5VWX1 349 aaKnown RBP16.64■□□□□ 0.25
TNXB-205ENST00000486148 TCTN3Q6NUS6 607 aa16.64■□□□□ 0.25
TNXB-205ENST00000486148 ELMOD2Q8IZ81 293 aa16.64■□□□□ 0.25
TNXB-205ENST00000486148 PLA2G15Q8NCC3 412 aa16.64■□□□□ 0.25
TNXB-205ENST00000486148 SIMC1Q8NDZ2 872 aa16.64■□□□□ 0.25
TNXB-205ENST00000486148 FAM46DQ8NEK8 389 aa16.64■□□□□ 0.25
TNXB-205ENST00000486148 OR4D11Q8NGI4 311 aa16.64■□□□□ 0.25
TNXB-205ENST00000486148 TRIM43Q96BQ3 446 aaPredicted RBP16.64■□□□□ 0.25
TNXB-205ENST00000486148 ST6GAL2Q96JF0 529 aa16.64■□□□□ 0.25
TNXB-205ENST00000486148 A4GALTQ9NPC4 353 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms