RNA–Protein interactions for RNA: ENST00000485645.5

SMC4-216, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-216ENST00000485645 CCDC168Q8NDH2 2452 aa15.85■□□□□ 0.13
SMC4-216ENST00000485645 FAM90A27PA6NNH2 459 aa15.84■□□□□ 0.13
SMC4-216ENST00000485645 ALOX15P16050 662 aaPredicted RBP15.84■□□□□ 0.13
SMC4-216ENST00000485645 ALDH18A1P54886 795 aaKnown RBP15.84■□□□□ 0.13
SMC4-216ENST00000485645 HNRNPH2P55795 449 aaKnown RBP15.84■□□□□ 0.13
SMC4-216ENST00000485645 NUP107P57740 925 aa15.84■□□□□ 0.13
SMC4-216ENST00000485645 RPS13P62277 151 aaKnown RBP15.84■□□□□ 0.13
SMC4-216ENST00000485645 FOXO1Q12778 655 aa15.84■□□□□ 0.13
SMC4-216ENST00000485645 HYAL4Q2M3T9 481 aa15.84■□□□□ 0.13
SMC4-216ENST00000485645 SLC22A10Q63ZE4 541 aa15.84■□□□□ 0.13
SMC4-216ENST00000485645 ZNF585AQ6P3V2 769 aa15.84■□□□□ 0.13
SMC4-216ENST00000485645 KLC3Q6P597 504 aa15.84■□□□□ 0.13
SMC4-216ENST00000485645 C9orf40Q8IXQ3 194 aa15.84■□□□□ 0.13
SMC4-216ENST00000485645 ST13P4Q8IZP2 240 aaPredicted RBP15.84■□□□□ 0.13
SMC4-216ENST00000485645 OR5M9Q8NGP3 310 aa15.84■□□□□ 0.13
SMC4-216ENST00000485645 FBXL20Q96IG2 436 aa15.84■□□□□ 0.13
SMC4-216ENST00000485645 MCCC2Q9HCC0 563 aa15.84■□□□□ 0.13
SMC4-216ENST00000485645 KCNJ16Q9NPI9 418 aa15.84■□□□□ 0.13
SMC4-216ENST00000485645 SNX15Q9NRS6 342 aa15.84■□□□□ 0.13
SMC4-216ENST00000485645 PNPLA3Q9NST1 481 aa15.84■□□□□ 0.13
SMC4-216ENST00000485645 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.84■□□□□ 0.13
SMC4-216ENST00000485645 TUBA8Q9NY65 449 aaPredicted RBP15.84■□□□□ 0.13
SMC4-216ENST00000485645 LIPGQ9Y5X9 500 aa15.84■□□□□ 0.13
SMC4-216ENST00000485645 INTS1Q8N201 2190 aaKnown RBP15.84■□□□□ 0.13
SMC4-216ENST00000485645 IQANK1A0A1B0GTG1 560 aa15.83■□□□□ 0.12
SMC4-216ENST00000485645 A0A1B0GVC2 190 aa15.83■□□□□ 0.12
SMC4-216ENST00000485645 ATP6AP2A0A1C7CYW4 349 aa15.83■□□□□ 0.12
SMC4-216ENST00000485645 NKX2-6A6NCS4 301 aa15.83■□□□□ 0.12
SMC4-216ENST00000485645 FIGNL2A6NMB9 653 aa15.83■□□□□ 0.12
SMC4-216ENST00000485645 H0YIV9 168 aa15.83■□□□□ 0.12
SMC4-216ENST00000485645 HRKO00198 91 aa15.83■□□□□ 0.12
SMC4-216ENST00000485645 PROM1O43490 865 aa15.83■□□□□ 0.12
SMC4-216ENST00000485645 UGDHO60701 494 aa15.83■□□□□ 0.12
SMC4-216ENST00000485645 PRKRAO75569 313 aaKnown RBP15.83■□□□□ 0.12
SMC4-216ENST00000485645 ATP6AP2O75787 350 aa15.83■□□□□ 0.12
SMC4-216ENST00000485645 KLHL2O95198 593 aa15.83■□□□□ 0.12
SMC4-216ENST00000485645 ACVR2AP27037 513 aa15.83■□□□□ 0.12
SMC4-216ENST00000485645 KRTAP10-9P60411 292 aa15.83■□□□□ 0.12
SMC4-216ENST00000485645 TBL3Q12788 808 aaKnown RBP15.83■□□□□ 0.12
SMC4-216ENST00000485645 GTF2H2Q13888 395 aa15.83■□□□□ 0.12
SMC4-216ENST00000485645 SLC10A1Q14973 349 aa15.83■□□□□ 0.12
SMC4-216ENST00000485645 PCBP2Q15366 365 aaKnown RBP eCLIP15.83■□□□□ 0.12
SMC4-216ENST00000485645 UAP1Q16222 522 aaPredicted RBP15.83■□□□□ 0.12
SMC4-216ENST00000485645 CPSF6Q16630 551 aaKnown RBP eCLIP15.83■□□□□ 0.12
SMC4-216ENST00000485645 ZNF791Q3KP31 576 aaPredicted RBP15.83■□□□□ 0.12
SMC4-216ENST00000485645 GTF2H2CQ6P1K8 395 aa15.83■□□□□ 0.12
SMC4-216ENST00000485645 DGAT2L6Q6ZPD8 337 aa15.83■□□□□ 0.12
SMC4-216ENST00000485645 TRILQ7L0X0 811 aa15.83■□□□□ 0.12
SMC4-216ENST00000485645 CCDC71Q8IV32 467 aaPredicted RBP15.83■□□□□ 0.12
SMC4-216ENST00000485645 SLC15A4Q8N697 577 aa15.83■□□□□ 0.12
SMC4-216ENST00000485645 PELOQ9BRX2 385 aaKnown RBP15.83■□□□□ 0.12
SMC4-216ENST00000485645 CNPPD1Q9BV87 410 aa15.83■□□□□ 0.12
SMC4-216ENST00000485645 UCK2Q9BZX2 261 aa15.83■□□□□ 0.12
SMC4-216ENST00000485645 LDAHQ9H6V9 325 aa15.83■□□□□ 0.12
SMC4-216ENST00000485645 IPPKQ9H8X2 491 aa15.83■□□□□ 0.12
SMC4-216ENST00000485645 LYARQ9NX58 379 aaKnown RBP15.83■□□□□ 0.12
SMC4-216ENST00000485645 TNPO3Q9Y5L0 923 aaKnown RBP15.83■□□□□ 0.12
SMC4-216ENST00000485645 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.83■□□□□ 0.12
SMC4-216ENST00000485645 HCFC1P51610 2035 aa15.82■□□□□ 0.12
SMC4-216ENST00000485645 A0A096LPK6 155 aa15.82■□□□□ 0.12
SMC4-216ENST00000485645 HMX2A2RU54 273 aa15.82■□□□□ 0.12
SMC4-216ENST00000485645 LRRC14BA6NHZ5 514 aa15.82■□□□□ 0.12
SMC4-216ENST00000485645 FOXO6A8MYZ6 492 aa15.82■□□□□ 0.12
SMC4-216ENST00000485645 AQP7O14520 342 aa15.82■□□□□ 0.12
SMC4-216ENST00000485645 KLK8O60259 260 aa15.82■□□□□ 0.12
SMC4-216ENST00000485645 SUSD5O60279 629 aa15.82■□□□□ 0.12
SMC4-216ENST00000485645 OR10H2O60403 315 aa15.82■□□□□ 0.12
SMC4-216ENST00000485645 GPR75O95800 540 aa15.82■□□□□ 0.12
SMC4-216ENST00000485645 TYK2P29597 1187 aa15.82■□□□□ 0.12
SMC4-216ENST00000485645 PHBP35232 272 aa15.82■□□□□ 0.12
SMC4-216ENST00000485645 BSGP35613 385 aa15.82■□□□□ 0.12
SMC4-216ENST00000485645 PIGAP37287 484 aa15.82■□□□□ 0.12
SMC4-216ENST00000485645 PIK3CGP48736 1102 aa15.82■□□□□ 0.12
SMC4-216ENST00000485645 MAN2A2P49641 1150 aa15.82■□□□□ 0.12
SMC4-216ENST00000485645 HERVK_113P63132 956 aa15.82■□□□□ 0.12
SMC4-216ENST00000485645 ERVK-8P63133 956 aa15.82■□□□□ 0.12
SMC4-216ENST00000485645 SLC7A5Q01650 507 aa15.82■□□□□ 0.12
SMC4-216ENST00000485645 CKAP4Q07065 602 aaKnown RBP15.82■□□□□ 0.12
SMC4-216ENST00000485645 TFF3Q07654 80 aa15.82■□□□□ 0.12
SMC4-216ENST00000485645 CUL3Q13618 768 aa15.82■□□□□ 0.12
SMC4-216ENST00000485645 ZNF267Q14586 743 aaPredicted RBP15.82■□□□□ 0.12
SMC4-216ENST00000485645 MRM1Q6IN84 353 aaKnown RBP15.82■□□□□ 0.12
SMC4-216ENST00000485645 CYP20A1Q6UW02 462 aa15.82■□□□□ 0.12
SMC4-216ENST00000485645 SLC29A4Q7RTT9 530 aa15.82■□□□□ 0.12
SMC4-216ENST00000485645 GOLGA7Q7Z5G4 137 aa15.82■□□□□ 0.12
SMC4-216ENST00000485645 DND1Q8IYX4 353 aaKnown RBP15.82■□□□□ 0.12
SMC4-216ENST00000485645 OR10Q1Q8NGQ4 319 aa15.82■□□□□ 0.12
SMC4-216ENST00000485645 DOK4Q8TEW6 326 aa15.82■□□□□ 0.12
SMC4-216ENST00000485645 PAQR8Q8TEZ7 354 aa15.82■□□□□ 0.12
SMC4-216ENST00000485645 SPACA9Q96E40 222 aaPredicted RBP15.82■□□□□ 0.12
SMC4-216ENST00000485645 ERVK-6Q9BXR3 956 aa15.82■□□□□ 0.12
SMC4-216ENST00000485645 ZNF717Q9BY31 904 aaPredicted RBP15.82■□□□□ 0.12
SMC4-216ENST00000485645 DDX31Q9H8H2 851 aaKnown RBP15.82■□□□□ 0.12
SMC4-216ENST00000485645 WDR41Q9HAD4 459 aa15.82■□□□□ 0.12
SMC4-216ENST00000485645 SH2D2AQ9NP31 389 aa15.82■□□□□ 0.12
SMC4-216ENST00000485645 SEMA4BQ9NPR2 832 aaPredicted RBP15.82■□□□□ 0.12
SMC4-216ENST00000485645 PSD3Q9NYI0 1048 aa15.82■□□□□ 0.12
SMC4-216ENST00000485645 CPSF2Q9P2I0 782 aaKnown RBP15.82■□□□□ 0.12
SMC4-216ENST00000485645 ACAD8Q9UKU7 415 aa15.82■□□□□ 0.12
SMC4-216ENST00000485645 ERVK-19Q9WJR5 959 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms