RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 CDKL1Q00532 357 aa3.95□□□□□ -1.78
VPS13A-211ENST00000484581 RIPK1Q13546 671 aa3.95□□□□□ -1.78
VPS13A-211ENST00000484581 RFTN1Q14699 578 aaPredicted RBP3.95□□□□□ -1.78
VPS13A-211ENST00000484581 C3AR1Q16581 482 aa3.95□□□□□ -1.78
VPS13A-211ENST00000484581 TPD52L1Q16890 204 aaPredicted RBP3.95□□□□□ -1.78
VPS13A-211ENST00000484581 USH1GQ495M9 461 aa3.95□□□□□ -1.78
VPS13A-211ENST00000484581 CFAP157Q5JU67 520 aa3.95□□□□□ -1.78
VPS13A-211ENST00000484581 NIPAL3Q6P499 406 aa3.95□□□□□ -1.78
VPS13A-211ENST00000484581 ZNF790Q6PG37 636 aa3.95□□□□□ -1.78
VPS13A-211ENST00000484581 TRIM65Q6PJ69 517 aa3.95□□□□□ -1.78
VPS13A-211ENST00000484581 RBMS3Q6XE24 437 aaKnown RBP3.95□□□□□ -1.78
VPS13A-211ENST00000484581 Q6ZVQ6 151 aa3.95□□□□□ -1.78
VPS13A-211ENST00000484581 TRPT1Q86TN4 253 aaKnown RBP3.95□□□□□ -1.78
VPS13A-211ENST00000484581 VPS36Q86VN1 386 aa3.95□□□□□ -1.78
VPS13A-211ENST00000484581 DND1Q8IYX4 353 aaKnown RBP3.95□□□□□ -1.78
VPS13A-211ENST00000484581 POC1AQ8NBT0 407 aa3.95□□□□□ -1.78
VPS13A-211ENST00000484581 OR2T11Q8NH01 316 aa3.95□□□□□ -1.78
VPS13A-211ENST00000484581 RDH11Q8TC12 318 aa3.95□□□□□ -1.78
VPS13A-211ENST00000484581 SUSD6Q92537 303 aa3.95□□□□□ -1.78
VPS13A-211ENST00000484581 CD101Q93033 1021 aa3.95□□□□□ -1.78
VPS13A-211ENST00000484581 GIMAP5Q96F15 307 aa3.95□□□□□ -1.78
VPS13A-211ENST00000484581 PCED1BQ96HM7 432 aa3.95□□□□□ -1.78
VPS13A-211ENST00000484581 DEFB118Q96PH6 123 aa3.95□□□□□ -1.78
VPS13A-211ENST00000484581 RAB40CQ96S21 281 aa3.95□□□□□ -1.78
VPS13A-211ENST00000484581 DCTN5Q9BTE1 182 aa3.95□□□□□ -1.78
VPS13A-211ENST00000484581 NDUFAF3Q9BU61 184 aa3.95□□□□□ -1.78
VPS13A-211ENST00000484581 ZSCAN5AQ9BUG6 496 aa3.95□□□□□ -1.78
VPS13A-211ENST00000484581 MAN2C1Q9NTJ4 1040 aa3.95□□□□□ -1.78
VPS13A-211ENST00000484581 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.95□□□□□ -1.78
VPS13A-211ENST00000484581 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.95□□□□□ -1.78
VPS13A-211ENST00000484581 P2RX2Q9UBL9 471 aa3.95□□□□□ -1.78
VPS13A-211ENST00000484581 ERRFI1Q9UJM3 462 aaPredicted RBP3.95□□□□□ -1.78
VPS13A-211ENST00000484581 PTPRUQ92729 1446 aa3.95□□□□□ -1.78
VPS13A-211ENST00000484581 SF3B1O75533 1304 aaKnown RBP eCLIP3.95□□□□□ -1.78
VPS13A-211ENST00000484581 hCG_38984A0A1B0GV85 526 aa3.94□□□□□ -1.78
VPS13A-211ENST00000484581 RNF222A6NCQ9 220 aa3.94□□□□□ -1.78
VPS13A-211ENST00000484581 SHISA7A6NL88 538 aa3.94□□□□□ -1.78
VPS13A-211ENST00000484581 CYSRT1A8MQ03 144 aa3.94□□□□□ -1.78
VPS13A-211ENST00000484581 TCP10L2B9ZVM9 353 aa3.94□□□□□ -1.78
VPS13A-211ENST00000484581 XPO1O14980 1071 aaKnown RBP3.94□□□□□ -1.78
VPS13A-211ENST00000484581 KIAA0513O60268 411 aa3.94□□□□□ -1.78
VPS13A-211ENST00000484581 CIDEAO60543 219 aa3.94□□□□□ -1.78
VPS13A-211ENST00000484581 LRCH4O75427 683 aa3.94□□□□□ -1.78
VPS13A-211ENST00000484581 ZNF821O75541 412 aaPredicted RBP3.94□□□□□ -1.78
VPS13A-211ENST00000484581 OR4F21O95013 312 aa3.94□□□□□ -1.78
VPS13A-211ENST00000484581 NGFP01138 241 aa3.94□□□□□ -1.78
VPS13A-211ENST00000484581 ATP1A1P05023 1023 aaKnown RBP3.94□□□□□ -1.78
VPS13A-211ENST00000484581 FAM157CP0CG43 387 aa3.94□□□□□ -1.78
VPS13A-211ENST00000484581 C4BPBP20851 252 aa3.94□□□□□ -1.78
VPS13A-211ENST00000484581 FEN1P39748 380 aaKnown RBP3.94□□□□□ -1.78
VPS13A-211ENST00000484581 SLC1A6P48664 564 aa3.94□□□□□ -1.78
VPS13A-211ENST00000484581 FHITP49789 147 aa3.94□□□□□ -1.78
VPS13A-211ENST00000484581 BACE1P56817 501 aa3.94□□□□□ -1.78
VPS13A-211ENST00000484581 PDK4Q16654 411 aa3.94□□□□□ -1.78
VPS13A-211ENST00000484581 LRIT3Q3SXY7 679 aa3.94□□□□□ -1.78
VPS13A-211ENST00000484581 ACSF3Q4G176 576 aaPredicted RBP3.94□□□□□ -1.78
VPS13A-211ENST00000484581 DDI2Q5TDH0 399 aa3.94□□□□□ -1.78
VPS13A-211ENST00000484581 SLC39A4Q6P5W5 647 aa3.94□□□□□ -1.78
VPS13A-211ENST00000484581 PRSS57Q6UWY2 283 aa3.94□□□□□ -1.78
VPS13A-211ENST00000484581 Q6ZRG5 221 aa3.94□□□□□ -1.78
VPS13A-211ENST00000484581 PAQR9Q6ZVX9 377 aa3.94□□□□□ -1.78
VPS13A-211ENST00000484581 ASRGL1Q7L266 308 aa3.94□□□□□ -1.78
VPS13A-211ENST00000484581 ERASQ7Z444 233 aa3.94□□□□□ -1.78
VPS13A-211ENST00000484581 GOLGA7Q7Z5G4 137 aa3.94□□□□□ -1.78
VPS13A-211ENST00000484581 ITIH5Q86UX2 942 aa3.94□□□□□ -1.78
VPS13A-211ENST00000484581 GRAMD2AQ8IUY3 354 aa3.94□□□□□ -1.78
VPS13A-211ENST00000484581 ZDHHC21Q8IVQ6 265 aa3.94□□□□□ -1.78
VPS13A-211ENST00000484581 STEAP2Q8NFT2 490 aa3.94□□□□□ -1.78
VPS13A-211ENST00000484581 OR4D10Q8NGI6 311 aa3.94□□□□□ -1.78
VPS13A-211ENST00000484581 OR10G8Q8NGN5 311 aa3.94□□□□□ -1.78
VPS13A-211ENST00000484581 GIPC3Q8TF64 312 aa3.94□□□□□ -1.78
VPS13A-211ENST00000484581 ACCSQ96QU6 501 aa3.94□□□□□ -1.78
VPS13A-211ENST00000484581 TRIM6Q9C030 488 aaPredicted RBP3.94□□□□□ -1.78
VPS13A-211ENST00000484581 GORASP2Q9H8Y8 452 aa3.94□□□□□ -1.78
VPS13A-211ENST00000484581 C3orf14Q9HBI5 128 aa3.94□□□□□ -1.78
VPS13A-211ENST00000484581 GDF3Q9NR23 364 aa3.94□□□□□ -1.78
VPS13A-211ENST00000484581 TXLNGQ9NUQ3 528 aa3.94□□□□□ -1.78
VPS13A-211ENST00000484581 SMPD3Q9NY59 655 aaPredicted RBP3.94□□□□□ -1.78
VPS13A-211ENST00000484581 WIPI2Q9Y4P8 454 aa3.94□□□□□ -1.78
VPS13A-211ENST00000484581 CUX2O14529 1486 aa3.93□□□□□ -1.78
VPS13A-211ENST00000484581 FGD5Q6ZNL6 1462 aa3.93□□□□□ -1.78
VPS13A-211ENST00000484581 ANHXE9PGG2 379 aa3.93□□□□□ -1.78
VPS13A-211ENST00000484581 UBXN8O00124 270 aa3.93□□□□□ -1.78
VPS13A-211ENST00000484581 MTX2O75431 263 aa3.93□□□□□ -1.78
VPS13A-211ENST00000484581 NADKO95544 446 aaPredicted RBP3.93□□□□□ -1.78
VPS13A-211ENST00000484581 CAVIN2O95810 425 aa3.93□□□□□ -1.78
VPS13A-211ENST00000484581 ANGPTL1O95841 491 aa3.93□□□□□ -1.78
VPS13A-211ENST00000484581 IQCF3P0C7M6 154 aa3.93□□□□□ -1.78
VPS13A-211ENST00000484581 CLUP10909 449 aa3.93□□□□□ -1.78
VPS13A-211ENST00000484581 AMD1P17707 334 aa3.93□□□□□ -1.78
VPS13A-211ENST00000484581 GIFP27352 417 aa3.93□□□□□ -1.78
VPS13A-211ENST00000484581 AXLP30530 894 aa3.93□□□□□ -1.78
VPS13A-211ENST00000484581 MATKP42679 507 aa3.93□□□□□ -1.78
VPS13A-211ENST00000484581 PTGFRP43088 359 aa3.93□□□□□ -1.78
VPS13A-211ENST00000484581 PTGER3P43115 390 aa3.93□□□□□ -1.78
VPS13A-211ENST00000484581 ACADVLP49748 655 aa3.93□□□□□ -1.78
VPS13A-211ENST00000484581 METAP1P53582 386 aa3.93□□□□□ -1.78
VPS13A-211ENST00000484581 NAPAP54920 295 aa3.93□□□□□ -1.78
VPS13A-211ENST00000484581 BTG1P62324 171 aa3.93□□□□□ -1.78
VPS13A-211ENST00000484581 GUCY2DQ02846 1103 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms