RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 C15orf38-AP3S2A0A0A6YYH1 394 aa11.79□□□□□ -0.52
UBR4-213ENST00000483922 MBD3L4A6NDZ8 208 aaPredicted RBP11.79□□□□□ -0.52
UBR4-213ENST00000483922 MBD3L3A6NE82 208 aaPredicted RBP11.79□□□□□ -0.52
UBR4-213ENST00000483922 ANKDD1BA6NHY2 528 aa11.79□□□□□ -0.52
UBR4-213ENST00000483922 MBD3L5A6NJ08 208 aaPredicted RBP11.79□□□□□ -0.52
UBR4-213ENST00000483922 H7C1Q1 480 aa11.79□□□□□ -0.52
UBR4-213ENST00000483922 SH3BGRLO75368 114 aa11.79□□□□□ -0.52
UBR4-213ENST00000483922 WISP3O95389 354 aaPredicted RBP11.79□□□□□ -0.52
UBR4-213ENST00000483922 HPNP05981 417 aa11.79□□□□□ -0.52
UBR4-213ENST00000483922 BMP7P18075 431 aa11.79□□□□□ -0.52
UBR4-213ENST00000483922 CTSSP25774 331 aa11.79□□□□□ -0.52
UBR4-213ENST00000483922 IVDP26440 423 aa11.79□□□□□ -0.52
UBR4-213ENST00000483922 PCSK6P29122 969 aa11.79□□□□□ -0.52
UBR4-213ENST00000483922 GGT5P36269 586 aa11.79□□□□□ -0.52
UBR4-213ENST00000483922 HNMTP50135 292 aa11.79□□□□□ -0.52
UBR4-213ENST00000483922 PCBP2Q15366 365 aaKnown RBP eCLIP11.79□□□□□ -0.52
UBR4-213ENST00000483922 ZNF662Q6ZS27 426 aa11.79□□□□□ -0.52
UBR4-213ENST00000483922 TAOK1Q7L7X3 1001 aa11.79□□□□□ -0.52
UBR4-213ENST00000483922 SPATA6LQ8N4H0 392 aa11.79□□□□□ -0.52
UBR4-213ENST00000483922 SLC15A4Q8N697 577 aa11.79□□□□□ -0.52
UBR4-213ENST00000483922 FAM13CQ8NE31 585 aa11.79□□□□□ -0.52
UBR4-213ENST00000483922 MBD3L2Q8NHZ7 208 aaPredicted RBP11.79□□□□□ -0.52
UBR4-213ENST00000483922 ANKRD7Q92527 254 aa11.79□□□□□ -0.52
UBR4-213ENST00000483922 WDR34Q96EX3 536 aa11.79□□□□□ -0.52
UBR4-213ENST00000483922 GNRHR2Q96P88 292 aa11.79□□□□□ -0.52
UBR4-213ENST00000483922 EGFL8Q99944 293 aa11.79□□□□□ -0.52
UBR4-213ENST00000483922 MCMBPQ9BTE3 642 aa11.79□□□□□ -0.52
UBR4-213ENST00000483922 MS4A8Q9BY19 250 aa11.79□□□□□ -0.52
UBR4-213ENST00000483922 UGT2B28Q9BY64 529 aa11.79□□□□□ -0.52
UBR4-213ENST00000483922 CNIH4Q9P003 139 aa11.79□□□□□ -0.52
UBR4-213ENST00000483922 BOKQ9UMX3 212 aaPredicted RBP11.79□□□□□ -0.52
UBR4-213ENST00000483922 A0A1W2PS29 197 aa11.78□□□□□ -0.52
UBR4-213ENST00000483922 PABPN1LA6NDY0 278 aaKnown RBP11.78□□□□□ -0.52
UBR4-213ENST00000483922 NCF1BA6NI72 391 aaPredicted RBP11.78□□□□□ -0.52
UBR4-213ENST00000483922 CD8B2A6NJW9 211 aa11.78□□□□□ -0.52
UBR4-213ENST00000483922 NCF1CA8MVU1 366 aaPredicted RBP11.78□□□□□ -0.52
UBR4-213ENST00000483922 SAP18O00422 153 aaKnown RBP11.78□□□□□ -0.52
UBR4-213ENST00000483922 SCELO95171 688 aa11.78□□□□□ -0.52
UBR4-213ENST00000483922 TTC4O95801 387 aa11.78□□□□□ -0.52
UBR4-213ENST00000483922 IL2RAP01589 272 aa11.78□□□□□ -0.52
UBR4-213ENST00000483922 NCF1P14598 390 aaPredicted RBP11.78□□□□□ -0.52
UBR4-213ENST00000483922 GDF1P27539 372 aa11.78□□□□□ -0.52
UBR4-213ENST00000483922 KCNC1P48547 511 aa11.78□□□□□ -0.52
UBR4-213ENST00000483922 CDK9P50750 372 aaKnown RBP11.78□□□□□ -0.52
UBR4-213ENST00000483922 NAGLUP54802 743 aa11.78□□□□□ -0.52
UBR4-213ENST00000483922 SLC37A1P57057 533 aa11.78□□□□□ -0.52
UBR4-213ENST00000483922 SORDQ00796 357 aa11.78□□□□□ -0.52
UBR4-213ENST00000483922 TGFBIQ15582 683 aa11.78□□□□□ -0.52
UBR4-213ENST00000483922 NTRK2Q16620 822 aa11.78□□□□□ -0.52
UBR4-213ENST00000483922 EIPR1Q53HC9 387 aa11.78□□□□□ -0.52
UBR4-213ENST00000483922 NHSL2Q5HYW2 709 aa11.78□□□□□ -0.52
UBR4-213ENST00000483922 SHEQ5VZ18 495 aa11.78□□□□□ -0.52
UBR4-213ENST00000483922 FBXW10Q5XX13 1052 aa11.78□□□□□ -0.52
UBR4-213ENST00000483922 C18orf63Q68DL7 685 aa11.78□□□□□ -0.52
UBR4-213ENST00000483922 DESI1Q6ICB0 168 aa11.78□□□□□ -0.52
UBR4-213ENST00000483922 KRT78Q8N1N4 520 aa11.78□□□□□ -0.52
UBR4-213ENST00000483922 ZNF441Q8N8Z8 693 aa11.78□□□□□ -0.52
UBR4-213ENST00000483922 BBOF1Q8ND07 529 aa11.78□□□□□ -0.52
UBR4-213ENST00000483922 SLC22A8Q8TCC7 542 aa11.78□□□□□ -0.52
UBR4-213ENST00000483922 ZNF473Q8WTR7 871 aaKnown RBP11.78□□□□□ -0.52
UBR4-213ENST00000483922 SLC44A1Q8WWI5 657 aa11.78□□□□□ -0.52
UBR4-213ENST00000483922 TRIB1Q96RU8 372 aa11.78□□□□□ -0.52
UBR4-213ENST00000483922 EHD1Q9H4M9 534 aa11.78□□□□□ -0.52
UBR4-213ENST00000483922 PPANQ9NQ55 473 aaKnown RBP11.78□□□□□ -0.52
UBR4-213ENST00000483922 COPS7AQ9UBW8 275 aa11.78□□□□□ -0.52
UBR4-213ENST00000483922 IKBKGQ9Y6K9 419 aa11.78□□□□□ -0.52
UBR4-213ENST00000483922 MED12Q93074 2177 aa11.77□□□□□ -0.53
UBR4-213ENST00000483922 A0A088AWK7 358 aa11.77□□□□□ -0.53
UBR4-213ENST00000483922 ANKRD33BA6NCL7 494 aa11.77□□□□□ -0.53
UBR4-213ENST00000483922 SYNDIG1LA6NDD5 238 aa11.77□□□□□ -0.53
UBR4-213ENST00000483922 TRIM64A6NGJ6 449 aa11.77□□□□□ -0.53
UBR4-213ENST00000483922 TRIM64BA6NI03 449 aa11.77□□□□□ -0.53
UBR4-213ENST00000483922 INAFM1C9JVW0 142 aa11.77□□□□□ -0.53
UBR4-213ENST00000483922 TRAPPC6AO75865 159 aa11.77□□□□□ -0.53
UBR4-213ENST00000483922 PIAS1O75925 651 aa11.77□□□□□ -0.53
UBR4-213ENST00000483922 TGFB1P01137 390 aa11.77□□□□□ -0.53
UBR4-213ENST00000483922 ZNF10P21506 573 aaPredicted RBP11.77□□□□□ -0.53
UBR4-213ENST00000483922 HIST1H1TP22492 207 aaPredicted RBP11.77□□□□□ -0.53
UBR4-213ENST00000483922 GSTM2P28161 218 aa11.77□□□□□ -0.53
UBR4-213ENST00000483922 ELK3P41970 407 aa11.77□□□□□ -0.53
UBR4-213ENST00000483922 FBXW4P57775 412 aa11.77□□□□□ -0.53
UBR4-213ENST00000483922 HERVK_113P63132 956 aa11.77□□□□□ -0.53
UBR4-213ENST00000483922 ERVK-8P63133 956 aa11.77□□□□□ -0.53
UBR4-213ENST00000483922 E2F2Q14209 437 aa11.77□□□□□ -0.53
UBR4-213ENST00000483922 EBPQ15125 230 aaKnown RBP11.77□□□□□ -0.53
UBR4-213ENST00000483922 WIPI1Q5MNZ9 446 aaPredicted RBP11.77□□□□□ -0.53
UBR4-213ENST00000483922 Q5PR19 223 aa11.77□□□□□ -0.53
UBR4-213ENST00000483922 CXXC5Q7LFL8 322 aaKnown RBP11.77□□□□□ -0.53
UBR4-213ENST00000483922 ZC3HC1Q86WB0 502 aaKnown RBP11.77□□□□□ -0.53
UBR4-213ENST00000483922 KIF18BQ86Y91 864 aa11.77□□□□□ -0.53
UBR4-213ENST00000483922 LIX1Q8N485 282 aa11.77□□□□□ -0.53
UBR4-213ENST00000483922 NKAPQ8N5F7 415 aaKnown RBP11.77□□□□□ -0.53
UBR4-213ENST00000483922 FBXL20Q96IG2 436 aa11.77□□□□□ -0.53
UBR4-213ENST00000483922 DACH2Q96NX9 599 aa11.77□□□□□ -0.53
UBR4-213ENST00000483922 DGAT2Q96PD7 388 aa11.77□□□□□ -0.53
UBR4-213ENST00000483922 KCNC2Q96PR1 638 aa11.77□□□□□ -0.53
UBR4-213ENST00000483922 YIPF4Q9BSR8 244 aa11.77□□□□□ -0.53
UBR4-213ENST00000483922 TBCDQ9BTW9 1192 aa11.77□□□□□ -0.53
UBR4-213ENST00000483922 DOHHQ9BU89 302 aa11.77□□□□□ -0.53
UBR4-213ENST00000483922 G6PC3Q9BUM1 346 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms