RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 GALR3O60755 368 aaPredicted RBP24.77■■□□□ 1.56
SHOX2-204ENST00000483851 ERAL1O75616 437 aaKnown RBP24.77■■□□□ 1.56
SHOX2-204ENST00000483851 GIMD1P0DJR0 217 aa24.77■■□□□ 1.56
SHOX2-204ENST00000483851 HOXD12P35452 270 aa24.77■■□□□ 1.56
SHOX2-204ENST00000483851 CDK9P50750 372 aaKnown RBP24.77■■□□□ 1.56
SHOX2-204ENST00000483851 BNIP3Q12983 259 aa24.77■■□□□ 1.56
SHOX2-204ENST00000483851 SHBQ15464 509 aa24.77■■□□□ 1.56
SHOX2-204ENST00000483851 FAM180BQ6P0A1 224 aa24.77■■□□□ 1.56
SHOX2-204ENST00000483851 C6orf120Q7Z4R8 191 aa24.77■■□□□ 1.56
SHOX2-204ENST00000483851 METTL25Q8N6Q8 603 aa24.77■■□□□ 1.56
SHOX2-204ENST00000483851 FAM86B1Q8N7N1 296 aa24.77■■□□□ 1.56
SHOX2-204ENST00000483851 C10orf90Q96M02 699 aa24.77■■□□□ 1.56
SHOX2-204ENST00000483851 ZNF681Q96N22 645 aa24.77■■□□□ 1.56
SHOX2-204ENST00000483851 ZNF285Q96NJ3 590 aa24.77■■□□□ 1.56
SHOX2-204ENST00000483851 DUSP23Q9BVJ7 150 aa24.77■■□□□ 1.56
SHOX2-204ENST00000483851 TMEM74BQ9NUR3 256 aa24.77■■□□□ 1.56
SHOX2-204ENST00000483851 DNAJB9Q9UBS3 223 aa24.77■■□□□ 1.56
SHOX2-204ENST00000483851 ZNF451Q9Y4E5 1061 aa24.77■■□□□ 1.56
SHOX2-204ENST00000483851 CACNA1EQ15878 2313 aa24.76■■□□□ 1.55
SHOX2-204ENST00000483851 MYOCOSA0A1B0GUC4 107 aa24.76■■□□□ 1.55
SHOX2-204ENST00000483851 GLOD5A6NK44 160 aa24.76■■□□□ 1.55
SHOX2-204ENST00000483851 YKT6O15498 198 aa24.76■■□□□ 1.55
SHOX2-204ENST00000483851 ARAFP10398 606 aa24.76■■□□□ 1.55
SHOX2-204ENST00000483851 CNR2P34972 360 aa24.76■■□□□ 1.55
SHOX2-204ENST00000483851 GPC1P35052 558 aa24.76■■□□□ 1.55
SHOX2-204ENST00000483851 MAGEA2P43356 314 aa24.76■■□□□ 1.55
SHOX2-204ENST00000483851 DSTNP60981 165 aa24.76■■□□□ 1.55
SHOX2-204ENST00000483851 GPLD1P80108 840 aa24.76■■□□□ 1.55
SHOX2-204ENST00000483851 EEF1A2Q05639 463 aaKnown RBP24.76■■□□□ 1.55
SHOX2-204ENST00000483851 RUNX2Q13950 521 aa24.76■■□□□ 1.55
SHOX2-204ENST00000483851 C16orf72Q14CZ0 275 aa24.76■■□□□ 1.55
SHOX2-204ENST00000483851 PRTGQ2VWP7 1150 aa24.76■■□□□ 1.55
SHOX2-204ENST00000483851 LRRC23Q53EV4 343 aaPredicted RBP24.76■■□□□ 1.55
SHOX2-204ENST00000483851 ISLR2Q6UXK2 745 aa24.76■■□□□ 1.55
SHOX2-204ENST00000483851 ARHGEF39Q8N4T4 335 aa24.76■■□□□ 1.55
SHOX2-204ENST00000483851 TECTAO75443 2155 aa24.76■■□□□ 1.55
SHOX2-204ENST00000483851 EME2A4GXA9 379 aaPredicted RBP24.75■■□□□ 1.55
SHOX2-204ENST00000483851 SCARB2Q14108 478 aa24.75■■□□□ 1.55
SHOX2-204ENST00000483851 NKG7Q16617 165 aa24.75■■□□□ 1.55
SHOX2-204ENST00000483851 LARP7Q4G0J3 582 aaKnown RBP eCLIP24.75■■□□□ 1.55
SHOX2-204ENST00000483851 DGLUCYQ7Z3D6 616 aa24.75■■□□□ 1.55
SHOX2-204ENST00000483851 SLC35F3Q8IY50 421 aa24.75■■□□□ 1.55
SHOX2-204ENST00000483851 SUN3Q8TAQ9 357 aa24.75■■□□□ 1.55
SHOX2-204ENST00000483851 PNPLA3Q9NST1 481 aa24.75■■□□□ 1.55
SHOX2-204ENST00000483851 ADPRHL2Q9NX46 363 aa24.75■■□□□ 1.55
SHOX2-204ENST00000483851 NLGN3Q9NZ94 848 aa24.75■■□□□ 1.55
SHOX2-204ENST00000483851 PLCL2Q9UPR0 1127 aa24.75■■□□□ 1.55
SHOX2-204ENST00000483851 H3BNH8 94 aa24.75■■□□□ 1.55
SHOX2-204ENST00000483851 PRKRAO75569 313 aaKnown RBP24.75■■□□□ 1.55
SHOX2-204ENST00000483851 EPHA8P29322 1005 aaPredicted RBP24.75■■□□□ 1.55
SHOX2-204ENST00000483851 ANXA11P50995 505 aaKnown RBP24.75■■□□□ 1.55
SHOX2-204ENST00000483851 CDK6Q00534 326 aa24.75■■□□□ 1.55
SHOX2-204ENST00000483851 NDUFA9Q16795 377 aa24.75■■□□□ 1.55
SHOX2-204ENST00000483851 RABEPKQ7Z6M1 372 aa24.75■■□□□ 1.55
SHOX2-204ENST00000483851 AHCYL2Q96HN2 611 aaKnown RBP24.75■■□□□ 1.55
SHOX2-204ENST00000483851 A4GALTQ9NPC4 353 aa24.75■■□□□ 1.55
SHOX2-204ENST00000483851 ANGPT4Q9Y264 503 aa24.75■■□□□ 1.55
SHOX2-204ENST00000483851 IGHV1OR21-1A0A087WYE8 117 aa24.74■■□□□ 1.55
SHOX2-204ENST00000483851 A0A1B0GTQ1 180 aa24.74■■□□□ 1.55
SHOX2-204ENST00000483851 H6PDO95479 791 aa24.74■■□□□ 1.55
SHOX2-204ENST00000483851 IFNA14P01570 189 aa24.74■■□□□ 1.55
SHOX2-204ENST00000483851 MYF6P23409 242 aa24.74■■□□□ 1.55
SHOX2-204ENST00000483851 SLC36A3Q495N2 470 aa24.74■■□□□ 1.55
SHOX2-204ENST00000483851 CEACAM20Q6UY09 585 aa24.74■■□□□ 1.55
SHOX2-204ENST00000483851 FAM92BQ6ZTR7 304 aa24.74■■□□□ 1.55
SHOX2-204ENST00000483851 OR6C4Q8NGE1 309 aa24.74■■□□□ 1.55
SHOX2-204ENST00000483851 OR56A1Q8NGH5 318 aa24.74■■□□□ 1.55
SHOX2-204ENST00000483851 MAL2Q969L2 176 aa24.74■■□□□ 1.55
SHOX2-204ENST00000483851 ADI1Q9BV57 179 aa24.74■■□□□ 1.55
SHOX2-204ENST00000483851 CLK4Q9HAZ1 481 aaKnown RBP24.74■■□□□ 1.55
SHOX2-204ENST00000483851 NTN4Q9HB63 628 aa24.74■■□□□ 1.55
SHOX2-204ENST00000483851 ANKHQ9HCJ1 492 aa24.74■■□□□ 1.55
SHOX2-204ENST00000483851 PDE7BQ9NP56 450 aa24.74■■□□□ 1.55
SHOX2-204ENST00000483851 MRPS2Q9Y399 296 aaKnown RBP24.74■■□□□ 1.55
SHOX2-204ENST00000483851 UPK1AO00322 258 aa24.73■■□□□ 1.55
SHOX2-204ENST00000483851 DUX1O43812 170 aa24.73■■□□□ 1.55
SHOX2-204ENST00000483851 ZBTB11O95625 1053 aaPredicted RBP24.73■■□□□ 1.55
SHOX2-204ENST00000483851 ZNF682O95780 498 aa24.73■■□□□ 1.55
SHOX2-204ENST00000483851 GABRA4P48169 554 aa24.73■■□□□ 1.55
SHOX2-204ENST00000483851 MERTKQ12866 999 aa24.73■■□□□ 1.55
SHOX2-204ENST00000483851 SRSF5Q13243 272 aaKnown RBP24.73■■□□□ 1.55
SHOX2-204ENST00000483851 CRB2Q5IJ48 1285 aa24.73■■□□□ 1.55
SHOX2-204ENST00000483851 TCTE1Q5JU00 501 aa24.73■■□□□ 1.55
SHOX2-204ENST00000483851 GARNL3Q5VVW2 1013 aa24.73■■□□□ 1.55
SHOX2-204ENST00000483851 USP53Q70EK8 1073 aa24.73■■□□□ 1.55
SHOX2-204ENST00000483851 PLXDC1Q8IUK5 500 aa24.73■■□□□ 1.55
SHOX2-204ENST00000483851 OR4K14Q8NGD5 310 aa24.73■■□□□ 1.55
SHOX2-204ENST00000483851 TGM7Q96PF1 710 aa24.73■■□□□ 1.55
SHOX2-204ENST00000483851 IL1RAPQ9NPH3 570 aa24.73■■□□□ 1.55
SHOX2-204ENST00000483851 ENAMQ9NRM1 1142 aa24.73■■□□□ 1.55
SHOX2-204ENST00000483851 NAALAD2Q9Y3Q0 740 aa24.73■■□□□ 1.55
SHOX2-204ENST00000483851 TMEM221A6NGB7 291 aa24.72■■□□□ 1.55
SHOX2-204ENST00000483851 WASHC1A8K0Z3 465 aa24.72■■□□□ 1.55
SHOX2-204ENST00000483851 M0R296 226 aa24.72■■□□□ 1.55
SHOX2-204ENST00000483851 HRO43593 1189 aa24.72■■□□□ 1.55
SHOX2-204ENST00000483851 SEMG1P04279 462 aa24.72■■□□□ 1.55
SHOX2-204ENST00000483851 ALDH4A1P30038 563 aa24.72■■□□□ 1.55
SHOX2-204ENST00000483851 PEX19P40855 299 aa24.72■■□□□ 1.55
SHOX2-204ENST00000483851 EMP3P54852 163 aa24.72■■□□□ 1.55
SHOX2-204ENST00000483851 SNRPNP63162 240 aaKnown RBP24.72■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms