RNA–Protein interactions for RNA: ENST00000482470.5

CALD1-220, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 3,941 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-220ENST00000482470 SYNDIG1Q9H7V2 258 aa8.71□□□□□ -1.02
CALD1-220ENST00000482470 CXorf36Q9H7Y0 433 aa8.71□□□□□ -1.02
CALD1-220ENST00000482470 ACOT13Q9NPJ3 140 aa8.71□□□□□ -1.02
CALD1-220ENST00000482470 C14orf119Q9NWQ9 140 aa8.71□□□□□ -1.02
CALD1-220ENST00000482470 TEX10Q9NXF1 929 aaPredicted RBP8.71□□□□□ -1.02
CALD1-220ENST00000482470 NDUFAF4Q9P032 175 aa8.71□□□□□ -1.02
CALD1-220ENST00000482470 SLC23A2Q9UGH3 650 aa8.71□□□□□ -1.02
CALD1-220ENST00000482470 NDOR1Q9UHB4 597 aa8.71□□□□□ -1.02
CALD1-220ENST00000482470 MKLN1Q9UL63 735 aa8.71□□□□□ -1.02
CALD1-220ENST00000482470 MYO16Q9Y6X6 1858 aa8.71□□□□□ -1.02
CALD1-220ENST00000482470 FURINP09958 794 aa8.7□□□□□ -1.02
CALD1-220ENST00000482470 SLC35G6P0C7Q6 338 aa8.7□□□□□ -1.02
CALD1-220ENST00000482470 POLR2CP19387 275 aaPredicted RBP8.7□□□□□ -1.02
CALD1-220ENST00000482470 CSNK2BP67870 215 aa8.7□□□□□ -1.02
CALD1-220ENST00000482470 CDK3Q00526 305 aa8.7□□□□□ -1.02
CALD1-220ENST00000482470 ZNF77Q15935 545 aa8.7□□□□□ -1.02
CALD1-220ENST00000482470 CDKN3Q16667 212 aa8.7□□□□□ -1.02
CALD1-220ENST00000482470 MICAQ29983 383 aa8.7□□□□□ -1.02
CALD1-220ENST00000482470 PYDC2Q56P42 97 aa8.7□□□□□ -1.02
CALD1-220ENST00000482470 SLC35F1Q5T1Q4 408 aa8.7□□□□□ -1.02
CALD1-220ENST00000482470 LIPKQ5VXJ0 399 aa8.7□□□□□ -1.02
CALD1-220ENST00000482470 LILRA6Q6PI73 481 aa8.7□□□□□ -1.02
CALD1-220ENST00000482470 MSANTD1Q6ZTZ1 278 aa8.7□□□□□ -1.02
CALD1-220ENST00000482470 USP43Q70EL4 1123 aa8.7□□□□□ -1.02
CALD1-220ENST00000482470 PRSS48Q7RTY5 328 aa8.7□□□□□ -1.02
CALD1-220ENST00000482470 VN1R5Q7Z5H4 357 aa8.7□□□□□ -1.02
CALD1-220ENST00000482470 BCDIN3DQ7Z5W3 292 aaKnown RBP8.7□□□□□ -1.02
CALD1-220ENST00000482470 SLC9B2Q86UD5 537 aa8.7□□□□□ -1.02
CALD1-220ENST00000482470 CHTF18Q8WVB6 975 aa8.7□□□□□ -1.02
CALD1-220ENST00000482470 TSACCQ96A04 125 aaPredicted RBP8.7□□□□□ -1.02
CALD1-220ENST00000482470 CHFRQ96EP1 664 aa8.7□□□□□ -1.02
CALD1-220ENST00000482470 SH3YL1Q96HL8 342 aaPredicted RBP8.7□□□□□ -1.02
CALD1-220ENST00000482470 LGR4Q9BXB1 951 aa8.7□□□□□ -1.02
CALD1-220ENST00000482470 MAFFQ9ULX9 164 aa8.7□□□□□ -1.02
CALD1-220ENST00000482470 CORINQ9Y5Q5 1042 aa8.7□□□□□ -1.02
CALD1-220ENST00000482470 COLEC10Q9Y6Z7 277 aa8.7□□□□□ -1.02
CALD1-220ENST00000482470 SCN4AP35499 1836 aa8.7□□□□□ -1.02
CALD1-220ENST00000482470 RFXAPO00287 272 aa8.7□□□□□ -1.02
CALD1-220ENST00000482470 YY2O15391 372 aa8.7□□□□□ -1.02
CALD1-220ENST00000482470 JRKO75564 520 aa8.7□□□□□ -1.02
CALD1-220ENST00000482470 IFNA16P05015 189 aa8.7□□□□□ -1.02
CALD1-220ENST00000482470 LAMP2P13473 410 aa8.7□□□□□ -1.02
CALD1-220ENST00000482470 HPGDP15428 266 aa8.7□□□□□ -1.02
CALD1-220ENST00000482470 ITIH1P19827 911 aa8.7□□□□□ -1.02
CALD1-220ENST00000482470 AK4P27144 223 aaPredicted RBP8.7□□□□□ -1.02
CALD1-220ENST00000482470 CENPAP49450 140 aa8.7□□□□□ -1.02
CALD1-220ENST00000482470 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.7□□□□□ -1.02
CALD1-220ENST00000482470 CD300CQ08708 224 aa8.7□□□□□ -1.02
CALD1-220ENST00000482470 MTAPQ13126 283 aa8.7□□□□□ -1.02
CALD1-220ENST00000482470 GNA13Q14344 377 aa8.7□□□□□ -1.02
CALD1-220ENST00000482470 ARTNQ5T4W7 220 aa8.7□□□□□ -1.02
CALD1-220ENST00000482470 ZNF57Q68EA5 555 aaPredicted RBP8.7□□□□□ -1.02
CALD1-220ENST00000482470 LAPTM4BQ86VI4 370 aa8.7□□□□□ -1.02
CALD1-220ENST00000482470 ZNF761Q86XN6 746 aaPredicted RBP8.7□□□□□ -1.02
CALD1-220ENST00000482470 RBM45Q8IUH3 476 aaKnown RBP8.7□□□□□ -1.02
CALD1-220ENST00000482470 KLHDC8AQ8IYD2 350 aa8.7□□□□□ -1.02
CALD1-220ENST00000482470 C19orf18Q8NEA5 215 aa8.7□□□□□ -1.02
CALD1-220ENST00000482470 FAM46DQ8NEK8 389 aa8.7□□□□□ -1.02
CALD1-220ENST00000482470 OR2L2Q8NH16 312 aa8.7□□□□□ -1.02
CALD1-220ENST00000482470 WDR20Q8TBZ3 569 aa8.7□□□□□ -1.02
CALD1-220ENST00000482470 TRUB1Q8WWH5 349 aaKnown RBP8.7□□□□□ -1.02
CALD1-220ENST00000482470 KLHL6Q8WZ60 621 aa8.7□□□□□ -1.02
CALD1-220ENST00000482470 FCGR1BQ92637 280 aa8.7□□□□□ -1.02
CALD1-220ENST00000482470 DIRAS2Q96HU8 199 aa8.7□□□□□ -1.02
CALD1-220ENST00000482470 FCRL4Q96PJ5 515 aa8.7□□□□□ -1.02
CALD1-220ENST00000482470 SPATA6Q9NWH7 488 aaPredicted RBP8.7□□□□□ -1.02
CALD1-220ENST00000482470 GSTK1Q9Y2Q3 226 aa8.7□□□□□ -1.02
CALD1-220ENST00000482470 SNX11Q9Y5W9 270 aa8.7□□□□□ -1.02
CALD1-220ENST00000482470 CABIN1Q9Y6J0 2220 aa8.7□□□□□ -1.02
CALD1-220ENST00000482470 BRCA2P51587 3418 aa8.7□□□□□ -1.02
CALD1-220ENST00000482470 GREB1Q4ZG55 1949 aa8.7□□□□□ -1.02
CALD1-220ENST00000482470 CLCA1A8K7I4 914 aa8.7□□□□□ -1.02
CALD1-220ENST00000482470 HNRNPCL2B2RXH8 293 aa8.7□□□□□ -1.02
CALD1-220ENST00000482470 ZNF701M0R085 212 aaPredicted RBP8.7□□□□□ -1.02
CALD1-220ENST00000482470 GREM1O60565 184 aa8.7□□□□□ -1.02
CALD1-220ENST00000482470 SEC14L2O76054 403 aa8.7□□□□□ -1.02
CALD1-220ENST00000482470 NAT2P11245 290 aa8.7□□□□□ -1.02
CALD1-220ENST00000482470 HOXB2P14652 356 aa8.7□□□□□ -1.02
CALD1-220ENST00000482470 TYRP1P17643 537 aa8.7□□□□□ -1.02
CALD1-220ENST00000482470 RHCEP18577 417 aa8.7□□□□□ -1.02
CALD1-220ENST00000482470 ARL4DP49703 201 aa8.7□□□□□ -1.02
CALD1-220ENST00000482470 SIM1P81133 766 aaPredicted RBP8.7□□□□□ -1.02
CALD1-220ENST00000482470 ZXDCQ2QGD7 858 aaPredicted RBP8.7□□□□□ -1.02
CALD1-220ENST00000482470 WSCD2Q2TBF2 565 aa8.7□□□□□ -1.02
CALD1-220ENST00000482470 PPP2R2DQ66LE6 453 aa8.7□□□□□ -1.02
CALD1-220ENST00000482470 PNCKQ6P2M8 343 aa8.7□□□□□ -1.02
CALD1-220ENST00000482470 SRFBP1Q8NEF9 429 aaKnown RBP8.7□□□□□ -1.02
CALD1-220ENST00000482470 SETD7Q8WTS6 366 aaKnown RBP8.7□□□□□ -1.02
CALD1-220ENST00000482470 HDHD2Q9H0R4 259 aa8.7□□□□□ -1.02
CALD1-220ENST00000482470 CRNNQ9UBG3 495 aaPredicted RBP8.7□□□□□ -1.02
CALD1-220ENST00000482470 COMMD3Q9UBI1 195 aa8.7□□□□□ -1.02
CALD1-220ENST00000482470 NDRG2Q9UN36 371 aaKnown RBP8.7□□□□□ -1.02
CALD1-220ENST00000482470 BRWD1Q9NSI6 2320 aa8.69□□□□□ -1.02
CALD1-220ENST00000482470 FAM170BA6NMN3 283 aa8.69□□□□□ -1.02
CALD1-220ENST00000482470 GFRA2O00451 464 aa8.69□□□□□ -1.02
CALD1-220ENST00000482470 PRSS23O95084 383 aa8.69□□□□□ -1.02
CALD1-220ENST00000482470 GASTP01350 101 aa8.69□□□□□ -1.02
CALD1-220ENST00000482470 ALPPP05187 535 aa8.69□□□□□ -1.02
CALD1-220ENST00000482470 IGFBP1P08833 259 aaPredicted RBP8.69□□□□□ -1.02
CALD1-220ENST00000482470 RCVRNP35243 200 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms