RNA–Protein interactions for RNA: ENST00000481522.1

COPA-204, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-204ENST00000481522 PRUNE1Q86TP1 453 aa3.05□□□□□ -1.92
COPA-204ENST00000481522 C4orf19Q8IY42 314 aa3.05□□□□□ -1.92
COPA-204ENST00000481522 APCDD1Q8J025 514 aa3.05□□□□□ -1.92
COPA-204ENST00000481522 DEPDC1BQ8WUY9 529 aa3.05□□□□□ -1.92
COPA-204ENST00000481522 FAM162AQ96A26 154 aa3.05□□□□□ -1.92
COPA-204ENST00000481522 RBM41Q96IZ5 413 aaKnown RBP3.05□□□□□ -1.92
COPA-204ENST00000481522 FAM218AQ96MZ4 157 aa3.05□□□□□ -1.92
COPA-204ENST00000481522 INTS14Q96SY0 518 aa3.05□□□□□ -1.92
COPA-204ENST00000481522 PKP2Q99959 881 aa3.05□□□□□ -1.92
COPA-204ENST00000481522 OVOL2Q9BRP0 275 aa3.05□□□□□ -1.92
COPA-204ENST00000481522 LMAN1LQ9HAT1 526 aa3.05□□□□□ -1.92
COPA-204ENST00000481522 IARS2Q9NSE4 1012 aaKnown RBP3.05□□□□□ -1.92
COPA-204ENST00000481522 NUDT4Q9NZJ9 180 aa3.05□□□□□ -1.92
COPA-204ENST00000481522 FBXL4Q9UKA2 621 aa3.05□□□□□ -1.92
COPA-204ENST00000481522 PILRBQ9UKJ0 227 aa3.05□□□□□ -1.92
COPA-204ENST00000481522 AGTPBP1Q9UPW5 1226 aa3.05□□□□□ -1.92
COPA-204ENST00000481522 WIPI2Q9Y4P8 454 aa3.05□□□□□ -1.92
COPA-204ENST00000481522 POMT1Q9Y6A1 747 aa3.05□□□□□ -1.92
COPA-204ENST00000481522 SVEP1Q4LDE5 3571 aa3.05□□□□□ -1.92
COPA-204ENST00000481522 LOC105371242A0A075B767 164 aa3.04□□□□□ -1.92
COPA-204ENST00000481522 C5orf52A6NGY3 159 aa3.04□□□□□ -1.92
COPA-204ENST00000481522 A8MVM7 634 aa3.04□□□□□ -1.92
COPA-204ENST00000481522 E5RGE8 158 aa3.04□□□□□ -1.92
COPA-204ENST00000481522 IDH3BO43837 385 aa3.04□□□□□ -1.92
COPA-204ENST00000481522 MOCS2O96007 188 aaPredicted RBP3.04□□□□□ -1.92
COPA-204ENST00000481522 LBPP18428 481 aa3.04□□□□□ -1.92
COPA-204ENST00000481522 SSTR1P30872 391 aa3.04□□□□□ -1.92
COPA-204ENST00000481522 DUTP33316 252 aaKnown RBP3.04□□□□□ -1.92
COPA-204ENST00000481522 OR1D5P58170 312 aa3.04□□□□□ -1.92
COPA-204ENST00000481522 PTENP60484 403 aa3.04□□□□□ -1.92
COPA-204ENST00000481522 MS4A2Q01362 244 aa3.04□□□□□ -1.92
COPA-204ENST00000481522 CALCOCO2Q13137 446 aa3.04□□□□□ -1.92
COPA-204ENST00000481522 SNRNP48Q6IEG0 339 aaKnown RBP3.04□□□□□ -1.92
COPA-204ENST00000481522 BTNL8Q6UX41 500 aa3.04□□□□□ -1.92
COPA-204ENST00000481522 CLEC18BQ6UXF7 455 aa3.04□□□□□ -1.92
COPA-204ENST00000481522 MACC1Q6ZN28 852 aa3.04□□□□□ -1.92
COPA-204ENST00000481522 P2RY8Q86VZ1 359 aa3.04□□□□□ -1.92
COPA-204ENST00000481522 GTF3AQ92664 365 aaKnown RBP3.04□□□□□ -1.92
COPA-204ENST00000481522 RIT1Q92963 219 aa3.04□□□□□ -1.92
COPA-204ENST00000481522 EXOC4Q96A65 974 aa3.04□□□□□ -1.92
COPA-204ENST00000481522 OMA1Q96E52 524 aa3.04□□□□□ -1.92
COPA-204ENST00000481522 BSCL2Q96G97 398 aaPredicted RBP3.04□□□□□ -1.92
COPA-204ENST00000481522 AGAP4Q96P64 663 aa3.04□□□□□ -1.92
COPA-204ENST00000481522 CITED2Q99967 270 aaPredicted RBP3.04□□□□□ -1.92
COPA-204ENST00000481522 LRRC61Q9BV99 259 aa3.04□□□□□ -1.92
COPA-204ENST00000481522 NACAP1Q9BZK3 213 aa3.04□□□□□ -1.92
COPA-204ENST00000481522 RPF1Q9H9Y2 349 aaKnown RBP3.04□□□□□ -1.92
COPA-204ENST00000481522 ZCCHC17Q9NP64 241 aaKnown RBP3.04□□□□□ -1.92
COPA-204ENST00000481522 NSG2Q9Y328 171 aa3.04□□□□□ -1.92
COPA-204ENST00000481522 SIP14410 1827 aa3.04□□□□□ -1.92
COPA-204ENST00000481522 SDK2Q58EX2 2172 aa3.04□□□□□ -1.92
COPA-204ENST00000481522 CPSF1Q10570 1443 aaKnown RBP3.03□□□□□ -1.92
COPA-204ENST00000481522 ANKARQ7Z5J8 1434 aa3.03□□□□□ -1.92
COPA-204ENST00000481522 PRSS46E5RG02 174 aa3.03□□□□□ -1.92
COPA-204ENST00000481522 NPIPA3F8WFD2 350 aa3.03□□□□□ -1.92
COPA-204ENST00000481522 H3BMM5 538 aa3.03□□□□□ -1.92
COPA-204ENST00000481522 TFECO14948 347 aaPredicted RBP3.03□□□□□ -1.92
COPA-204ENST00000481522 SAP30O75446 220 aa3.03□□□□□ -1.92
COPA-204ENST00000481522 ZFYP08048 801 aaPredicted RBP3.03□□□□□ -1.92
COPA-204ENST00000481522 PSMB4P28070 264 aa3.03□□□□□ -1.92
COPA-204ENST00000481522 HOXD10P28358 340 aa3.03□□□□□ -1.92
COPA-204ENST00000481522 PDHA2P29803 388 aa3.03□□□□□ -1.92
COPA-204ENST00000481522 TIA1P31483 386 aaKnown RBP eCLIP3.03□□□□□ -1.92
COPA-204ENST00000481522 SOAT1P35610 550 aa3.03□□□□□ -1.92
COPA-204ENST00000481522 OR3A3P47888 321 aa3.03□□□□□ -1.92
COPA-204ENST00000481522 RBP5P82980 135 aa3.03□□□□□ -1.92
COPA-204ENST00000481522 DHODHQ02127 395 aa3.03□□□□□ -1.92
COPA-204ENST00000481522 ELAVL2Q12926 359 aaKnown RBP3.03□□□□□ -1.92
COPA-204ENST00000481522 BFSP1Q12934 665 aa3.03□□□□□ -1.92
COPA-204ENST00000481522 NFATC2Q13469 925 aa3.03□□□□□ -1.92
COPA-204ENST00000481522 ENPP2Q13822 863 aa3.03□□□□□ -1.92
COPA-204ENST00000481522 DUSP5Q16690 384 aa3.03□□□□□ -1.92
COPA-204ENST00000481522 FAM106AQ4KMX7 169 aa3.03□□□□□ -1.92
COPA-204ENST00000481522 FAM46CQ5VWP2 391 aa3.03□□□□□ -1.92
COPA-204ENST00000481522 SHQ1Q6PI26 577 aaKnown RBP3.03□□□□□ -1.92
COPA-204ENST00000481522 DCLRE1AQ6PJP8 1040 aa3.03□□□□□ -1.92
COPA-204ENST00000481522 PAQR6Q6TCH4 344 aa3.03□□□□□ -1.92
COPA-204ENST00000481522 LCLAT1Q6UWP7 414 aa3.03□□□□□ -1.92
COPA-204ENST00000481522 METTL4Q8N3J2 472 aa3.03□□□□□ -1.92
COPA-204ENST00000481522 ARNTL2Q8WYA1 636 aa3.03□□□□□ -1.92
COPA-204ENST00000481522 DNASE1L2Q92874 299 aa3.03□□□□□ -1.92
COPA-204ENST00000481522 NXPE2Q96DL1 559 aa3.03□□□□□ -1.92
COPA-204ENST00000481522 NEDD4LQ96PU5 975 aa3.03□□□□□ -1.92
COPA-204ENST00000481522 IL12RB2Q99665 862 aa3.03□□□□□ -1.92
COPA-204ENST00000481522 GPATCH1Q9BRR8 931 aaKnown RBP3.03□□□□□ -1.92
COPA-204ENST00000481522 ALKBH7Q9BT30 221 aaPredicted RBP3.03□□□□□ -1.92
COPA-204ENST00000481522 DCTN5Q9BTE1 182 aa3.03□□□□□ -1.92
COPA-204ENST00000481522 THUMPD3Q9BV44 507 aaKnown RBP3.03□□□□□ -1.92
COPA-204ENST00000481522 DNAI2Q9GZS0 605 aa3.03□□□□□ -1.92
COPA-204ENST00000481522 C10orf88Q9H8K7 445 aa3.03□□□□□ -1.92
COPA-204ENST00000481522 MINDY3Q9H8M7 445 aa3.03□□□□□ -1.92
COPA-204ENST00000481522 PDRG1Q9NUG6 133 aa3.03□□□□□ -1.92
COPA-204ENST00000481522 POLKQ9UBT6 870 aa3.03□□□□□ -1.92
COPA-204ENST00000481522 PRKDCP78527 4128 aaKnown RBP3.03□□□□□ -1.92
COPA-204ENST00000481522 DUOX1Q9NRD9 1551 aa3.03□□□□□ -1.92
COPA-204ENST00000481522 ANK2Q01484 3957 aa3.02□□□□□ -1.93
COPA-204ENST00000481522 MN1Q10571 1320 aaPredicted RBP3.02□□□□□ -1.93
COPA-204ENST00000481522 CDHR2Q9BYE9 1310 aa3.02□□□□□ -1.93
COPA-204ENST00000481522 LRP4O75096 1905 aa3.02□□□□□ -1.93
COPA-204ENST00000481522 A0A087WZ39 114 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms