RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 HMX2A2RU54 273 aa13.56□□□□□ -0.24
NPHP4-208ENST00000478423 J3QLW9 94 aa13.56□□□□□ -0.24
NPHP4-208ENST00000478423 GPR37L1O60883 481 aa13.56□□□□□ -0.24
NPHP4-208ENST00000478423 SDC3O75056 442 aa13.56□□□□□ -0.24
NPHP4-208ENST00000478423 ALDOCP09972 364 aaKnown RBP13.56□□□□□ -0.24
NPHP4-208ENST00000478423 ZNF19P17023 458 aa13.56□□□□□ -0.24
NPHP4-208ENST00000478423 ZNF182P17025 639 aaPredicted RBP13.56□□□□□ -0.24
NPHP4-208ENST00000478423 RHCEP18577 417 aa13.56□□□□□ -0.24
NPHP4-208ENST00000478423 TANGO2Q6ICL3 276 aa13.56□□□□□ -0.24
NPHP4-208ENST00000478423 NIPAL1Q6NVV3 410 aa13.56□□□□□ -0.24
NPHP4-208ENST00000478423 ANKRD33Q7Z3H0 272 aa13.56□□□□□ -0.24
NPHP4-208ENST00000478423 C12orf40Q86WS4 652 aa13.56□□□□□ -0.24
NPHP4-208ENST00000478423 LSMEM2Q8N112 164 aa13.56□□□□□ -0.24
NPHP4-208ENST00000478423 OR4K17Q8NGC6 315 aa13.56□□□□□ -0.24
NPHP4-208ENST00000478423 BRF2Q9HAW0 419 aa13.56□□□□□ -0.24
NPHP4-208ENST00000478423 ECM29Q5VYK3 1845 aa13.56□□□□□ -0.24
NPHP4-208ENST00000478423 E2F3O00716 465 aa13.56□□□□□ -0.24
NPHP4-208ENST00000478423 HPRP00739 348 aa13.56□□□□□ -0.24
NPHP4-208ENST00000478423 HLA-DPB1P04440 258 aa13.56□□□□□ -0.24
NPHP4-208ENST00000478423 RPL34P49207 117 aaKnown RBP13.56□□□□□ -0.24
NPHP4-208ENST00000478423 PRLHRP49683 370 aa13.56□□□□□ -0.24
NPHP4-208ENST00000478423 MLLT10P55197 1068 aa13.56□□□□□ -0.24
NPHP4-208ENST00000478423 SHC2P98077 582 aa13.56□□□□□ -0.24
NPHP4-208ENST00000478423 MC1RQ01726 317 aa13.56□□□□□ -0.24
NPHP4-208ENST00000478423 SLC3A1Q07837 685 aa13.56□□□□□ -0.24
NPHP4-208ENST00000478423 FCHO2Q0JRZ9 810 aa13.56□□□□□ -0.24
NPHP4-208ENST00000478423 LINC01599Q8WXQ3 324 aa13.56□□□□□ -0.24
NPHP4-208ENST00000478423 PIK3R3Q92569 461 aa13.56□□□□□ -0.24
NPHP4-208ENST00000478423 MND1Q9BWT6 205 aa13.56□□□□□ -0.24
NPHP4-208ENST00000478423 ING4Q9UNL4 249 aa13.56□□□□□ -0.24
NPHP4-208ENST00000478423 RNF6Q9Y252 685 aa13.56□□□□□ -0.24
NPHP4-208ENST00000478423 RBM7Q9Y580 266 aaKnown RBP13.56□□□□□ -0.24
NPHP4-208ENST00000478423 LINC01553A4QN01 128 aa13.56□□□□□ -0.24
NPHP4-208ENST00000478423 FAAHO00519 579 aa13.56□□□□□ -0.24
NPHP4-208ENST00000478423 HCRTR2O43614 444 aa13.56□□□□□ -0.24
NPHP4-208ENST00000478423 TACSTD2P09758 323 aa13.56□□□□□ -0.24
NPHP4-208ENST00000478423 GP1BBP13224 206 aa13.56□□□□□ -0.24
NPHP4-208ENST00000478423 CBLP22681 906 aa13.56□□□□□ -0.24
NPHP4-208ENST00000478423 RABIFP47224 123 aa13.56□□□□□ -0.24
NPHP4-208ENST00000478423 RNF175Q8N4F7 328 aa13.56□□□□□ -0.24
NPHP4-208ENST00000478423 LMNTD1Q8N9Z9 388 aa13.56□□□□□ -0.24
NPHP4-208ENST00000478423 SLC29A1Q99808 456 aa13.56□□□□□ -0.24
NPHP4-208ENST00000478423 TMED9Q9BVK6 235 aa13.56□□□□□ -0.24
NPHP4-208ENST00000478423 BCL2L14Q9BZR8 327 aa13.56□□□□□ -0.24
NPHP4-208ENST00000478423 DMRT3Q9NQL9 472 aa13.56□□□□□ -0.24
NPHP4-208ENST00000478423 FAM118AQ9NWS6 357 aa13.56□□□□□ -0.24
NPHP4-208ENST00000478423 ZNF726A6NNF4 738 aa13.55□□□□□ -0.24
NPHP4-208ENST00000478423 VILLO15195 856 aa13.55□□□□□ -0.24
NPHP4-208ENST00000478423 APBB3O95704 486 aa13.55□□□□□ -0.24
NPHP4-208ENST00000478423 ZNF12P17014 697 aa13.55□□□□□ -0.24
NPHP4-208ENST00000478423 OXTRP30559 389 aa13.55□□□□□ -0.24
NPHP4-208ENST00000478423 SLC6A6P31641 620 aa13.55□□□□□ -0.24
NPHP4-208ENST00000478423 IRS1P35568 1242 aa13.55□□□□□ -0.24
NPHP4-208ENST00000478423 P2RY2P41231 377 aa13.55□□□□□ -0.24
NPHP4-208ENST00000478423 TXNL4AP83876 142 aaKnown RBP13.55□□□□□ -0.24
NPHP4-208ENST00000478423 RGNQ15493 299 aa13.55□□□□□ -0.24
NPHP4-208ENST00000478423 UGT3A2Q3SY77 523 aa13.55□□□□□ -0.24
NPHP4-208ENST00000478423 LHX8Q68G74 356 aa13.55□□□□□ -0.24
NPHP4-208ENST00000478423 TTLL10Q6ZVT0 673 aa13.55□□□□□ -0.24
NPHP4-208ENST00000478423 OR51G2Q8NGK0 314 aa13.55□□□□□ -0.24
NPHP4-208ENST00000478423 OR2L2Q8NH16 312 aa13.55□□□□□ -0.24
NPHP4-208ENST00000478423 FATE1Q969F0 183 aa13.55□□□□□ -0.24
NPHP4-208ENST00000478423 ZFYVE21Q9BQ24 234 aa13.55□□□□□ -0.24
NPHP4-208ENST00000478423 MAGIXQ9H6Y5 334 aa13.55□□□□□ -0.24
NPHP4-208ENST00000478423 TRIM36Q9NQ86 728 aa13.55□□□□□ -0.24
NPHP4-208ENST00000478423 HEBP1Q9NRV9 189 aa13.55□□□□□ -0.24
NPHP4-208ENST00000478423 ARAP2Q8WZ64 1704 aa13.55□□□□□ -0.24
NPHP4-208ENST00000478423 SERPINA3P01011 423 aa13.55□□□□□ -0.24
NPHP4-208ENST00000478423 RETP07949 1114 aa13.55□□□□□ -0.24
NPHP4-208ENST00000478423 TUBA3CQ13748 450 aa13.55□□□□□ -0.24
NPHP4-208ENST00000478423 INAVAQ3KP66 663 aa13.55□□□□□ -0.24
NPHP4-208ENST00000478423 Q6ZSR6 202 aa13.55□□□□□ -0.24
NPHP4-208ENST00000478423 ZNF550Q7Z398 422 aa13.55□□□□□ -0.24
NPHP4-208ENST00000478423 LKAAEAR1Q8TD35 194 aa13.55□□□□□ -0.24
NPHP4-208ENST00000478423 TMEM80Q96HE8 168 aa13.55□□□□□ -0.24
NPHP4-208ENST00000478423 ADAD1Q96M93 576 aaKnown RBP13.55□□□□□ -0.24
NPHP4-208ENST00000478423 SORBS1Q9BX66 1292 aaKnown RBP13.55□□□□□ -0.24
NPHP4-208ENST00000478423 METTL7AQ9H8H3 244 aa13.55□□□□□ -0.24
NPHP4-208ENST00000478423 PELI2Q9HAT8 420 aa13.55□□□□□ -0.24
NPHP4-208ENST00000478423 CACNA1CQ13936 2221 aa13.55□□□□□ -0.24
NPHP4-208ENST00000478423 H0YJX3 145 aa13.55□□□□□ -0.24
NPHP4-208ENST00000478423 CAMK1Q14012 370 aa13.55□□□□□ -0.24
NPHP4-208ENST00000478423 GFM1Q96RP9 751 aaKnown RBP13.55□□□□□ -0.24
NPHP4-208ENST00000478423 MACROD1Q9BQ69 325 aa13.55□□□□□ -0.24
NPHP4-208ENST00000478423 SEC61A2Q9H9S3 476 aa13.55□□□□□ -0.24
NPHP4-208ENST00000478423 ARMC1Q9NVT9 282 aa13.55□□□□□ -0.24
NPHP4-208ENST00000478423 TMEM45AQ9NWC5 275 aa13.55□□□□□ -0.24
NPHP4-208ENST00000478423 EURLQ9NYK6 297 aa13.55□□□□□ -0.24
NPHP4-208ENST00000478423 DKK3Q9UBP4 350 aa13.55□□□□□ -0.24
NPHP4-208ENST00000478423 CD207Q9UJ71 328 aa13.55□□□□□ -0.24
NPHP4-208ENST00000478423 SATB2Q9UPW6 733 aa13.55□□□□□ -0.24
NPHP4-208ENST00000478423 DUX1O43812 170 aa13.54□□□□□ -0.24
NPHP4-208ENST00000478423 ZNF217O75362 1048 aa13.54□□□□□ -0.24
NPHP4-208ENST00000478423 OR12D2P58182 307 aa13.54□□□□□ -0.24
NPHP4-208ENST00000478423 VBP1P61758 197 aa13.54□□□□□ -0.24
NPHP4-208ENST00000478423 OR8J1Q8NGP2 316 aa13.54□□□□□ -0.24
NPHP4-208ENST00000478423 TMCO6Q96DC7 493 aa13.54□□□□□ -0.24
NPHP4-208ENST00000478423 PEX11GQ96HA9 241 aa13.54□□□□□ -0.24
NPHP4-208ENST00000478423 RFXAPO00287 272 aa13.54□□□□□ -0.24
NPHP4-208ENST00000478423 ARNTLO00327 626 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms