RNA–Protein interactions for RNA: ENST00000478288.5

ABCF3-212, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-212ENST00000478288 OR5M9Q8NGP3 310 aa11.98□□□□□ -0.49
ABCF3-212ENST00000478288 ESAMQ96AP7 390 aa11.98□□□□□ -0.49
ABCF3-212ENST00000478288 RBM18Q96H35 190 aaKnown RBP11.98□□□□□ -0.49
ABCF3-212ENST00000478288 ATOH8Q96SQ7 321 aa11.98□□□□□ -0.49
ABCF3-212ENST00000478288 KRT12Q99456 494 aa11.98□□□□□ -0.49
ABCF3-212ENST00000478288 NAPGQ99747 312 aaPredicted RBP11.98□□□□□ -0.49
ABCF3-212ENST00000478288 CENPKQ9BS16 269 aa11.98□□□□□ -0.49
ABCF3-212ENST00000478288 KCNF1Q9H3M0 494 aa11.98□□□□□ -0.49
ABCF3-212ENST00000478288 RPF2Q9H7B2 306 aaKnown RBP11.98□□□□□ -0.49
ABCF3-212ENST00000478288 ZFP64Q9NPA5 681 aa11.98□□□□□ -0.49
ABCF3-212ENST00000478288 TUBA8Q9NY65 449 aaPredicted RBP11.98□□□□□ -0.49
ABCF3-212ENST00000478288 CNIH4Q9P003 139 aa11.98□□□□□ -0.49
ABCF3-212ENST00000478288 OPTCQ9UBM4 332 aa11.98□□□□□ -0.49
ABCF3-212ENST00000478288 Q9UFV3 132 aa11.98□□□□□ -0.49
ABCF3-212ENST00000478288 ACAD8Q9UKU7 415 aa11.98□□□□□ -0.49
ABCF3-212ENST00000478288 SNX24Q9Y343 169 aa11.98□□□□□ -0.49
ABCF3-212ENST00000478288 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.98□□□□□ -0.49
ABCF3-212ENST00000478288 DOCK7Q96N67 2140 aa11.98□□□□□ -0.49
ABCF3-212ENST00000478288 TRGV5A0A0B4J1U4 118 aa11.97□□□□□ -0.49
ABCF3-212ENST00000478288 ATP6AP2A0A1C7CYW4 349 aa11.97□□□□□ -0.49
ABCF3-212ENST00000478288 FAM221AA4D161 298 aa11.97□□□□□ -0.49
ABCF3-212ENST00000478288 FAM187AA6NFU0 413 aa11.97□□□□□ -0.49
ABCF3-212ENST00000478288 OR6C76A6NM76 312 aa11.97□□□□□ -0.49
ABCF3-212ENST00000478288 RTCAO00442 366 aaKnown RBP11.97□□□□□ -0.49
ABCF3-212ENST00000478288 ATP6AP2O75787 350 aa11.97□□□□□ -0.49
ABCF3-212ENST00000478288 ZWINTO95229 277 aa11.97□□□□□ -0.49
ABCF3-212ENST00000478288 CELA3AP09093 270 aa11.97□□□□□ -0.49
ABCF3-212ENST00000478288 FBXO45P0C2W1 286 aa11.97□□□□□ -0.49
ABCF3-212ENST00000478288 SLC35E2BP0CK96 405 aa11.97□□□□□ -0.49
ABCF3-212ENST00000478288 EPB42P16452 691 aa11.97□□□□□ -0.49
ABCF3-212ENST00000478288 ENDOUP21128 410 aaKnown RBP11.97□□□□□ -0.49
ABCF3-212ENST00000478288 CRABP2P29373 138 aa11.97□□□□□ -0.49
ABCF3-212ENST00000478288 TLX1P31314 330 aaPredicted RBP11.97□□□□□ -0.49
ABCF3-212ENST00000478288 DNAJA1P31689 397 aaKnown RBP11.97□□□□□ -0.49
ABCF3-212ENST00000478288 GALNSP34059 522 aa11.97□□□□□ -0.49
ABCF3-212ENST00000478288 ID2Q02363 134 aa11.97□□□□□ -0.49
ABCF3-212ENST00000478288 FOLH1Q04609 750 aa11.97□□□□□ -0.49
ABCF3-212ENST00000478288 MYBPHQ13203 477 aa11.97□□□□□ -0.49
ABCF3-212ENST00000478288 SLAMF1Q13291 335 aa11.97□□□□□ -0.49
ABCF3-212ENST00000478288 TBCELQ5QJ74 424 aa11.97□□□□□ -0.49
ABCF3-212ENST00000478288 CAPN12Q6ZSI9 719 aa11.97□□□□□ -0.49
ABCF3-212ENST00000478288 GPR180Q86V85 440 aa11.97□□□□□ -0.49
ABCF3-212ENST00000478288 TMEM200AQ86VY9 491 aa11.97□□□□□ -0.49
ABCF3-212ENST00000478288 OR10Q1Q8NGQ4 319 aa11.97□□□□□ -0.49
ABCF3-212ENST00000478288 HUS1BQ8NHY5 278 aa11.97□□□□□ -0.49
ABCF3-212ENST00000478288 RHEBL1Q8TAI7 183 aa11.97□□□□□ -0.49
ABCF3-212ENST00000478288 RGMAQ96B86 450 aa11.97□□□□□ -0.49
ABCF3-212ENST00000478288 ERP44Q9BS26 406 aa11.97□□□□□ -0.49
ABCF3-212ENST00000478288 CXXC4Q9H2H0 198 aa11.97□□□□□ -0.49
ABCF3-212ENST00000478288 ALG9Q9H6U8 611 aa11.97□□□□□ -0.49
ABCF3-212ENST00000478288 LDAHQ9H6V9 325 aa11.97□□□□□ -0.49
ABCF3-212ENST00000478288 NMRAL1Q9HBL8 299 aa11.97□□□□□ -0.49
ABCF3-212ENST00000478288 SAYSD1Q9NPB0 183 aa11.97□□□□□ -0.49
ABCF3-212ENST00000478288 DMRT3Q9NQL9 472 aa11.97□□□□□ -0.49
ABCF3-212ENST00000478288 CHCHD2Q9Y6H1 151 aaPredicted RBP11.97□□□□□ -0.49
ABCF3-212ENST00000478288 IKBKGQ9Y6K9 419 aa11.97□□□□□ -0.49
ABCF3-212ENST00000478288 NSD1Q96L73 2696 aaPredicted RBP11.97□□□□□ -0.49
ABCF3-212ENST00000478288 MYOCOSA0A1B0GUC4 107 aa11.96□□□□□ -0.49
ABCF3-212ENST00000478288 ANKRD33BA6NCL7 494 aa11.96□□□□□ -0.49
ABCF3-212ENST00000478288 LRRC3CA6NJW4 275 aa11.96□□□□□ -0.49
ABCF3-212ENST00000478288 SYCE1LA8MT33 242 aa11.96□□□□□ -0.49
ABCF3-212ENST00000478288 PLPP1O14494 284 aa11.96□□□□□ -0.49
ABCF3-212ENST00000478288 UGDHO60701 494 aa11.96□□□□□ -0.49
ABCF3-212ENST00000478288 TGFB1P01137 390 aa11.96□□□□□ -0.49
ABCF3-212ENST00000478288 PCNAP12004 261 aa11.96□□□□□ -0.49
ABCF3-212ENST00000478288 ALOX15P16050 662 aaPredicted RBP11.96□□□□□ -0.49
ABCF3-212ENST00000478288 SERPINB3P29508 390 aa11.96□□□□□ -0.49
ABCF3-212ENST00000478288 ADH7P40394 386 aa11.96□□□□□ -0.49
ABCF3-212ENST00000478288 BUD31P41223 144 aaPredicted RBP11.96□□□□□ -0.49
ABCF3-212ENST00000478288 ART1P52961 327 aa11.96□□□□□ -0.49
ABCF3-212ENST00000478288 GNG11P61952 73 aa11.96□□□□□ -0.49
ABCF3-212ENST00000478288 KCNJ2P63252 427 aa11.96□□□□□ -0.49
ABCF3-212ENST00000478288 NAB1Q13506 487 aa11.96□□□□□ -0.49
ABCF3-212ENST00000478288 NTRK2Q16620 822 aa11.96□□□□□ -0.49
ABCF3-212ENST00000478288 LIPJQ5W064 366 aa11.96□□□□□ -0.49
ABCF3-212ENST00000478288 METTL2BQ6P1Q9 378 aaKnown RBP11.96□□□□□ -0.49
ABCF3-212ENST00000478288 C3orf62Q6ZUJ4 267 aa11.96□□□□□ -0.49
ABCF3-212ENST00000478288 SLC29A4Q7RTT9 530 aa11.96□□□□□ -0.49
ABCF3-212ENST00000478288 MAATS1Q7Z4T9 603 aa11.96□□□□□ -0.49
ABCF3-212ENST00000478288 TBC1D1Q86TI0 1168 aaPredicted RBP11.96□□□□□ -0.49
ABCF3-212ENST00000478288 NEIL3Q8TAT5 605 aa11.96□□□□□ -0.49
ABCF3-212ENST00000478288 FOXC2Q99958 501 aa11.96□□□□□ -0.49
ABCF3-212ENST00000478288 ZNF717Q9BY31 904 aaPredicted RBP11.96□□□□□ -0.49
ABCF3-212ENST00000478288 WWTR1Q9GZV5 400 aa11.96□□□□□ -0.49
ABCF3-212ENST00000478288 PROK2Q9HC23 129 aa11.96□□□□□ -0.49
ABCF3-212ENST00000478288 SEMA4BQ9NPR2 832 aaPredicted RBP11.96□□□□□ -0.49
ABCF3-212ENST00000478288 LYARQ9NX58 379 aaKnown RBP11.96□□□□□ -0.49
ABCF3-212ENST00000478288 PSD3Q9NYI0 1048 aa11.96□□□□□ -0.49
ABCF3-212ENST00000478288 SPRR3Q9UBC9 169 aa11.96□□□□□ -0.49
ABCF3-212ENST00000478288 PCDHGA11Q9Y5H2 935 aa11.96□□□□□ -0.49
ABCF3-212ENST00000478288 MED12Q93074 2177 aa11.95□□□□□ -0.5
ABCF3-212ENST00000478288 IQANK1A0A1B0GTG1 560 aa11.95□□□□□ -0.5
ABCF3-212ENST00000478288 HSPB2A8KAH6 182 aa11.95□□□□□ -0.5
ABCF3-212ENST00000478288 SUPT3HB4E1H0 165 aa11.95□□□□□ -0.5
ABCF3-212ENST00000478288 H0YIV9 168 aa11.95□□□□□ -0.5
ABCF3-212ENST00000478288 PROM1O43490 865 aa11.95□□□□□ -0.5
ABCF3-212ENST00000478288 SUPT3HO75486 399 aa11.95□□□□□ -0.5
ABCF3-212ENST00000478288 CTAG2O75638 210 aa11.95□□□□□ -0.5
ABCF3-212ENST00000478288 GPR75O95800 540 aa11.95□□□□□ -0.5
ABCF3-212ENST00000478288 LTA4HP09960 611 aaKnown RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms