RNA–Protein interactions for RNA: ENST00000477937.2

HDAC7-222, Transcript of histone deacetylase 7, human

TSL 5

Gene HDAC7, Length 410 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC7-222	ENST00000477937	RNFT1	Q5M7Z0	435 aa		12.8	□□□□□ -0.36
HDAC7-222	ENST00000477937	LETMD1	Q6P1Q0	360 aa		12.8	□□□□□ -0.36
HDAC7-222	ENST00000477937	OPN5	Q6U736	354 aa		12.8	□□□□□ -0.36
HDAC7-222	ENST00000477937	BNC2	Q6ZN30	1099 aa	Predicted RBP	12.8	□□□□□ -0.36
HDAC7-222	ENST00000477937	SLC22A9	Q8IVM8	553 aa		12.8	□□□□□ -0.36
HDAC7-222	ENST00000477937	PSD4	Q8NDX1	1056 aa		12.8	□□□□□ -0.36
HDAC7-222	ENST00000477937	TRPC4AP	Q8TEL6	797 aa		12.8	□□□□□ -0.36
HDAC7-222	ENST00000477937	SELENOM	Q8WWX9	145 aa		12.8	□□□□□ -0.36
HDAC7-222	ENST00000477937	FBXL20	Q96IG2	436 aa		12.8	□□□□□ -0.36
HDAC7-222	ENST00000477937	MRPL1	Q9BYD6	325 aa	Known RBP	12.8	□□□□□ -0.36
HDAC7-222	ENST00000477937	BRF2	Q9HAW0	419 aa		12.8	□□□□□ -0.36
HDAC7-222	ENST00000477937	NMRK1	Q9NWW6	199 aa		12.8	□□□□□ -0.36
HDAC7-222	ENST00000477937	TBK1	Q9UHD2	729 aa		12.8	□□□□□ -0.36
HDAC7-222	ENST00000477937	TRPS1	Q9UHF7	1281 aa		12.8	□□□□□ -0.36
HDAC7-222	ENST00000477937	CACNA1D	Q01668	2161 aa		12.8	□□□□□ -0.36
HDAC7-222	ENST00000477937	DOPEY1	Q5JWR5	2465 aa		12.8	□□□□□ -0.36
HDAC7-222	ENST00000477937		A0A1B0GTL3	188 aa		12.79	□□□□□ -0.36
HDAC7-222	ENST00000477937	WASHC1	A8K0Z3	465 aa		12.79	□□□□□ -0.36
HDAC7-222	ENST00000477937	GOLGA8R	I6L899	631 aa		12.79	□□□□□ -0.36
HDAC7-222	ENST00000477937	TFEC	O14948	347 aa	Predicted RBP	12.79	□□□□□ -0.36
HDAC7-222	ENST00000477937	PGRMC2	O15173	223 aa		12.79	□□□□□ -0.36
HDAC7-222	ENST00000477937	DLX3	O60479	287 aa		12.79	□□□□□ -0.36
HDAC7-222	ENST00000477937	GUCY1B2	O75343	617 aa		12.79	□□□□□ -0.36
HDAC7-222	ENST00000477937	PDYN	P01213	254 aa		12.79	□□□□□ -0.36
HDAC7-222	ENST00000477937	IGKV3-11	P04433	115 aa		12.79	□□□□□ -0.36
HDAC7-222	ENST00000477937	ESRRA	P11474	423 aa	Predicted RBP	12.79	□□□□□ -0.36
HDAC7-222	ENST00000477937	ABO	P16442	354 aa		12.79	□□□□□ -0.36
HDAC7-222	ENST00000477937	TSPAN8	P19075	237 aa		12.79	□□□□□ -0.36
HDAC7-222	ENST00000477937	ATP5F1	P24539	256 aa	Predicted RBP	12.79	□□□□□ -0.36
HDAC7-222	ENST00000477937	GALNS	P34059	522 aa		12.79	□□□□□ -0.36
HDAC7-222	ENST00000477937	RFC3	P40938	356 aa		12.79	□□□□□ -0.36
HDAC7-222	ENST00000477937	ASPH	Q12797	758 aa		12.79	□□□□□ -0.36
HDAC7-222	ENST00000477937	ZNF267	Q14586	743 aa	Predicted RBP	12.79	□□□□□ -0.36
HDAC7-222	ENST00000477937	RASA2	Q15283	850 aa		12.79	□□□□□ -0.36
HDAC7-222	ENST00000477937	MPEG1	Q2M385	716 aa		12.79	□□□□□ -0.36
HDAC7-222	ENST00000477937	UNC50	Q53HI1	259 aa		12.79	□□□□□ -0.36
HDAC7-222	ENST00000477937	PIGG	Q5H8A4	983 aa		12.79	□□□□□ -0.36
HDAC7-222	ENST00000477937	ZNF678	Q5SXM1	525 aa		12.79	□□□□□ -0.36
HDAC7-222	ENST00000477937	CCNYL2	Q5T2Q4	361 aa		12.79	□□□□□ -0.36
HDAC7-222	ENST00000477937	OR52E8	Q6IFG1	317 aa		12.79	□□□□□ -0.36
HDAC7-222	ENST00000477937		Q6ZPB1	254 aa	Predicted RBP	12.79	□□□□□ -0.36
HDAC7-222	ENST00000477937	DGAT2L6	Q6ZPD8	337 aa		12.79	□□□□□ -0.36
HDAC7-222	ENST00000477937	RTL4	Q6ZR62	310 aa		12.79	□□□□□ -0.36
HDAC7-222	ENST00000477937	GSPT2	Q8IYD1	628 aa	Known RBP	12.79	□□□□□ -0.36
HDAC7-222	ENST00000477937	METTL4	Q8N3J2	472 aa		12.79	□□□□□ -0.36
HDAC7-222	ENST00000477937	ZFP62	Q8NB50	900 aa	Predicted RBP	12.79	□□□□□ -0.36
HDAC7-222	ENST00000477937	LRRN4CL	Q8ND94	238 aa		12.79	□□□□□ -0.36
HDAC7-222	ENST00000477937	C16orf52	Q8NHV5	167 aa		12.79	□□□□□ -0.36
HDAC7-222	ENST00000477937	NUBPL	Q8TB37	319 aa		12.79	□□□□□ -0.36
HDAC7-222	ENST00000477937	UBLCP1	Q8WVY7	318 aa	Predicted RBP	12.79	□□□□□ -0.36
HDAC7-222	ENST00000477937	RIT1	Q92963	219 aa		12.79	□□□□□ -0.36
HDAC7-222	ENST00000477937	CCDC120	Q96HB5	630 aa		12.79	□□□□□ -0.36
HDAC7-222	ENST00000477937	SGCZ	Q96LD1	299 aa		12.79	□□□□□ -0.36
HDAC7-222	ENST00000477937	CNPPD1	Q9BV87	410 aa		12.79	□□□□□ -0.36
HDAC7-222	ENST00000477937	EPB41L4B	Q9H329	900 aa		12.79	□□□□□ -0.36
HDAC7-222	ENST00000477937	FARSB	Q9NSD9	589 aa	Known RBP	12.79	□□□□□ -0.36
HDAC7-222	ENST00000477937	DCDC2	Q9UHG0	476 aa		12.79	□□□□□ -0.36
HDAC7-222	ENST00000477937	SLC12A4	Q9UP95	1085 aa		12.79	□□□□□ -0.36
HDAC7-222	ENST00000477937	NIN	Q8N4C6	2090 aa		12.79	□□□□□ -0.36
HDAC7-222	ENST00000477937	HRK	O00198	91 aa		12.78	□□□□□ -0.36
HDAC7-222	ENST00000477937	OR4F21	O95013	312 aa		12.78	□□□□□ -0.36
HDAC7-222	ENST00000477937	SLC35E2	P0CK97	266 aa		12.78	□□□□□ -0.36
HDAC7-222	ENST00000477937	PYGB	P11216	843 aa		12.78	□□□□□ -0.36
HDAC7-222	ENST00000477937	IMPDH1	P20839	514 aa		12.78	□□□□□ -0.36
HDAC7-222	ENST00000477937	MAPK12	P53778	367 aa		12.78	□□□□□ -0.36
HDAC7-222	ENST00000477937	ERVK-8	P63133	956 aa		12.78	□□□□□ -0.36
HDAC7-222	ENST00000477937	C3AR1	Q16581	482 aa		12.78	□□□□□ -0.36
HDAC7-222	ENST00000477937	SPRED3	Q2MJR0	410 aa		12.78	□□□□□ -0.36
HDAC7-222	ENST00000477937	ZNF750	Q32MQ0	723 aa		12.78	□□□□□ -0.36
HDAC7-222	ENST00000477937	NDUFAF5	Q5TEU4	345 aa		12.78	□□□□□ -0.36
HDAC7-222	ENST00000477937	RNF111	Q6ZNA4	994 aa		12.78	□□□□□ -0.36
HDAC7-222	ENST00000477937	SLC29A4	Q7RTT9	530 aa		12.78	□□□□□ -0.36
HDAC7-222	ENST00000477937	C9orf40	Q8IXQ3	194 aa		12.78	□□□□□ -0.36
HDAC7-222	ENST00000477937	GOLM1	Q8NBJ4	401 aa		12.78	□□□□□ -0.36
HDAC7-222	ENST00000477937	OR2M7	Q8NG81	312 aa		12.78	□□□□□ -0.36
HDAC7-222	ENST00000477937	OR4K14	Q8NGD5	310 aa		12.78	□□□□□ -0.36
HDAC7-222	ENST00000477937	SLC22A8	Q8TCC7	542 aa		12.78	□□□□□ -0.36
HDAC7-222	ENST00000477937	UCN3	Q969E3	161 aa		12.78	□□□□□ -0.36
HDAC7-222	ENST00000477937	TEX10	Q9NXF1	929 aa	Predicted RBP	12.78	□□□□□ -0.36
HDAC7-222	ENST00000477937	TINAG	Q9UJW2	476 aa		12.78	□□□□□ -0.36
HDAC7-222	ENST00000477937	ZNF225	Q9UK10	706 aa		12.78	□□□□□ -0.36
HDAC7-222	ENST00000477937	ERVK-19	Q9WJR5	959 aa		12.78	□□□□□ -0.36
HDAC7-222	ENST00000477937	NCOA6	Q14686	2063 aa	Predicted RBP	12.77	□□□□□ -0.36
HDAC7-222	ENST00000477937	DNAJC13	O75165	2243 aa		12.77	□□□□□ -0.36
HDAC7-222	ENST00000477937	PCNX1	Q96RV3	2341 aa		12.77	□□□□□ -0.36
HDAC7-222	ENST00000477937	ACOT7	O00154	380 aa		12.77	□□□□□ -0.37
HDAC7-222	ENST00000477937	PRRG2	O14669	202 aa		12.77	□□□□□ -0.37
HDAC7-222	ENST00000477937	HS6ST1	O60243	411 aa		12.77	□□□□□ -0.37
HDAC7-222	ENST00000477937	KRT6A	P02538	564 aa		12.77	□□□□□ -0.37
HDAC7-222	ENST00000477937	KRT6B	P04259	564 aa		12.77	□□□□□ -0.37
HDAC7-222	ENST00000477937		P04436	131 aa		12.77	□□□□□ -0.37
HDAC7-222	ENST00000477937	HSD3B1	P14060	373 aa		12.77	□□□□□ -0.37
HDAC7-222	ENST00000477937	CNR1	P21554	472 aa		12.77	□□□□□ -0.37
HDAC7-222	ENST00000477937	HSD3B2	P26439	372 aa		12.77	□□□□□ -0.37
HDAC7-222	ENST00000477937	DCT	P40126	519 aa		12.77	□□□□□ -0.37
HDAC7-222	ENST00000477937	KRT6C	P48668	564 aa		12.77	□□□□□ -0.37
HDAC7-222	ENST00000477937	PRKAA2	P54646	552 aa		12.77	□□□□□ -0.37
HDAC7-222	ENST00000477937	HSF1	Q00613	529 aa		12.77	□□□□□ -0.37
HDAC7-222	ENST00000477937	PLGLB1	Q02325	96 aa		12.77	□□□□□ -0.37
HDAC7-222	ENST00000477937	ZNF787	Q6DD87	383 aa		12.77	□□□□□ -0.37

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