RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 IGKV3D-11A0A0A0MRZ8 115 aa15.18■□□□□ 0.02
VHL-203ENST00000477538 MYOCOSA0A1B0GUC4 107 aa15.18■□□□□ 0.02
VHL-203ENST00000477538 A0A1W2PS29 197 aa15.18■□□□□ 0.02
VHL-203ENST00000477538 TCRBV16S1A1N1A0A5B0 115 aa15.18■□□□□ 0.02
VHL-203ENST00000477538 ALOX12BO75342 701 aa15.18■□□□□ 0.02
VHL-203ENST00000477538 IL6P05231 212 aa15.18■□□□□ 0.02
VHL-203ENST00000477538 PGRP06401 933 aa15.18■□□□□ 0.02
VHL-203ENST00000477538 UMODP07911 640 aa15.18■□□□□ 0.02
VHL-203ENST00000477538 CSNK2A2P19784 350 aaPredicted RBP15.18■□□□□ 0.02
VHL-203ENST00000477538 NTSP30990 170 aa15.18■□□□□ 0.02
VHL-203ENST00000477538 FEN1P39748 380 aaKnown RBP15.18■□□□□ 0.02
VHL-203ENST00000477538 XKP51811 444 aa15.18■□□□□ 0.02
VHL-203ENST00000477538 DGKQP52824 942 aa15.18■□□□□ 0.02
VHL-203ENST00000477538 SERTAD2Q14140 314 aa15.18■□□□□ 0.02
VHL-203ENST00000477538 RCAN2Q14206 197 aa15.18■□□□□ 0.02
VHL-203ENST00000477538 NSDHLQ15738 373 aa15.18■□□□□ 0.02
VHL-203ENST00000477538 ZNF750Q32MQ0 723 aa15.18■□□□□ 0.02
VHL-203ENST00000477538 TIGD2Q4W5G0 525 aa15.18■□□□□ 0.02
VHL-203ENST00000477538 FAAH2Q6GMR7 532 aa15.18■□□□□ 0.02
VHL-203ENST00000477538 OR4F3Q6IEY1 312 aa15.18■□□□□ 0.02
VHL-203ENST00000477538 BLOC1S3Q6QNY0 202 aa15.18■□□□□ 0.02
VHL-203ENST00000477538 NATD1Q8N6N6 113 aa15.18■□□□□ 0.02
VHL-203ENST00000477538 OR8J2Q8NGG1 315 aa15.18■□□□□ 0.02
VHL-203ENST00000477538 METTL21AQ8WXB1 218 aa15.18■□□□□ 0.02
VHL-203ENST00000477538 CIDECQ96AQ7 238 aaPredicted RBP15.18■□□□□ 0.02
VHL-203ENST00000477538 ERP27Q96DN0 273 aa15.18■□□□□ 0.02
VHL-203ENST00000477538 BBS4Q96RK4 519 aa15.18■□□□□ 0.02
VHL-203ENST00000477538 ALOXE3Q9BYJ1 711 aa15.18■□□□□ 0.02
VHL-203ENST00000477538 GPN2Q9H9Y4 310 aaPredicted RBP15.18■□□□□ 0.02
VHL-203ENST00000477538 SEMA3GQ9NS98 782 aa15.18■□□□□ 0.02
VHL-203ENST00000477538 PCDHGA6Q9Y5G7 932 aa15.18■□□□□ 0.02
VHL-203ENST00000477538 MED13Q9UHV7 2174 aa15.17■□□□□ 0.02
VHL-203ENST00000477538 SYNDIG1LA6NDD5 238 aa15.17■□□□□ 0.02
VHL-203ENST00000477538 TLX3O43711 291 aaPredicted RBP15.17■□□□□ 0.02
VHL-203ENST00000477538 IGHEP01854 428 aa15.17■□□□□ 0.02
VHL-203ENST00000477538 CPMP14384 443 aa15.17■□□□□ 0.02
VHL-203ENST00000477538 LIFP15018 202 aa15.17■□□□□ 0.02
VHL-203ENST00000477538 CD1EP15812 388 aa15.17■□□□□ 0.02
VHL-203ENST00000477538 PORP16435 677 aaPredicted RBP15.17■□□□□ 0.02
VHL-203ENST00000477538 PHC1P78364 1004 aa15.17■□□□□ 0.02
VHL-203ENST00000477538 DUSP2Q05923 314 aa15.17■□□□□ 0.02
VHL-203ENST00000477538 CLN3Q13286 438 aa15.17■□□□□ 0.02
VHL-203ENST00000477538 BIKQ13323 160 aa15.17■□□□□ 0.02
VHL-203ENST00000477538 CEBPEQ15744 281 aa15.17■□□□□ 0.02
VHL-203ENST00000477538 MPEG1Q2M385 716 aa15.17■□□□□ 0.02
VHL-203ENST00000477538 LANCL3Q6ZV70 420 aa15.17■□□□□ 0.02
VHL-203ENST00000477538 VASH2Q86V25 355 aa15.17■□□□□ 0.02
VHL-203ENST00000477538 LRRC25Q8N386 305 aaPredicted RBP15.17■□□□□ 0.02
VHL-203ENST00000477538 C7orf57Q8NEG2 295 aa15.17■□□□□ 0.02
VHL-203ENST00000477538 KCNE4Q8WWG9 221 aa15.17■□□□□ 0.02
VHL-203ENST00000477538 GATA6Q92908 595 aa15.17■□□□□ 0.02
VHL-203ENST00000477538 SPDL1Q96EA4 605 aa15.17■□□□□ 0.02
VHL-203ENST00000477538 ZNF681Q96N22 645 aa15.17■□□□□ 0.02
VHL-203ENST00000477538 OR52E6Q96RD3 313 aa15.17■□□□□ 0.02
VHL-203ENST00000477538 EFHD1Q9BUP0 239 aa15.17■□□□□ 0.02
VHL-203ENST00000477538 CCDC86Q9H6F5 360 aaKnown RBP15.17■□□□□ 0.02
VHL-203ENST00000477538 SLAMF7Q9NQ25 335 aa15.17■□□□□ 0.02
VHL-203ENST00000477538 FAM120CQ9NX05 1096 aaKnown RBP15.17■□□□□ 0.02
VHL-203ENST00000477538 DKK4Q9UBT3 224 aa15.17■□□□□ 0.02
VHL-203ENST00000477538 MRPS18BQ9Y676 258 aaKnown RBP15.17■□□□□ 0.02
VHL-203ENST00000477538 WDFY3Q8IZQ1 3526 aa15.17■□□□□ 0.02
VHL-203ENST00000477538 NCOR2Q9Y618 2525 aa15.17■□□□□ 0.02
VHL-203ENST00000477538 URB1O60287 2271 aaKnown RBP15.17■□□□□ 0.02
VHL-203ENST00000477538 MED19A0JLT2 244 aaPredicted RBP15.16■□□□□ 0.02
VHL-203ENST00000477538 DYTNA2CJ06 578 aa15.16■□□□□ 0.02
VHL-203ENST00000477538 CCDC154A6NI56 674 aa15.16■□□□□ 0.02
VHL-203ENST00000477538 MYO1GB0I1T2 1018 aa15.16■□□□□ 0.02
VHL-203ENST00000477538 CFLARO15519 480 aa15.16■□□□□ 0.02
VHL-203ENST00000477538 OR10H2O60403 315 aa15.16■□□□□ 0.02
VHL-203ENST00000477538 IFNA16P05015 189 aa15.16■□□□□ 0.02
VHL-203ENST00000477538 SLC35E2P0CK97 266 aa15.16■□□□□ 0.02
VHL-203ENST00000477538 CAPN3P20807 821 aa15.16■□□□□ 0.02
VHL-203ENST00000477538 EFNA1P20827 205 aaPredicted RBP15.16■□□□□ 0.02
VHL-203ENST00000477538 FRKP42685 505 aaPredicted RBP15.16■□□□□ 0.02
VHL-203ENST00000477538 STT3AP46977 705 aa15.16■□□□□ 0.02
VHL-203ENST00000477538 NCBP2P52298 156 aaKnown RBP eCLIP15.16■□□□□ 0.02
VHL-203ENST00000477538 WNT3P56703 355 aa15.16■□□□□ 0.02
VHL-203ENST00000477538 PLIN5Q00G26 463 aa15.16■□□□□ 0.02
VHL-203ENST00000477538 MAPRE2Q15555 327 aa15.16■□□□□ 0.02
VHL-203ENST00000477538 ANXA8L1Q5VT79 327 aa15.16■□□□□ 0.02
VHL-203ENST00000477538 TMEM205Q6UW68 189 aa15.16■□□□□ 0.02
VHL-203ENST00000477538 ERMP1Q7Z2K6 904 aa15.16■□□□□ 0.02
VHL-203ENST00000477538 ANKRD37Q7Z713 158 aa15.16■□□□□ 0.02
VHL-203ENST00000477538 TREML1Q86YW5 311 aa15.16■□□□□ 0.02
VHL-203ENST00000477538 CCDC116Q8IYX3 515 aa15.16■□□□□ 0.02
VHL-203ENST00000477538 ST13P4Q8IZP2 240 aaPredicted RBP15.16■□□□□ 0.02
VHL-203ENST00000477538 ZNF248Q8NDW4 579 aa15.16■□□□□ 0.02
VHL-203ENST00000477538 ZFP28Q8NHY6 868 aa15.16■□□□□ 0.02
VHL-203ENST00000477538 SNIP1Q8TAD8 396 aaKnown RBP15.16■□□□□ 0.02
VHL-203ENST00000477538 TSPEARQ8WU66 669 aa15.16■□□□□ 0.02
VHL-203ENST00000477538 VPS33AQ96AX1 596 aa15.16■□□□□ 0.02
VHL-203ENST00000477538 ZBED6CLQ96FA7 236 aaPredicted RBP15.16■□□□□ 0.02
VHL-203ENST00000477538 NAF1Q96HR8 494 aaKnown RBP15.16■□□□□ 0.02
VHL-203ENST00000477538 DGAT2Q96PD7 388 aa15.16■□□□□ 0.02
VHL-203ENST00000477538 PELOQ9BRX2 385 aaKnown RBP15.16■□□□□ 0.02
VHL-203ENST00000477538 ACSS1Q9NUB1 689 aaPredicted RBP15.16■□□□□ 0.02
VHL-203ENST00000477538 IL17BQ9UHF5 180 aa15.16■□□□□ 0.02
VHL-203ENST00000477538 PCSK5Q92824 1860 aa15.15■□□□□ 0.02
VHL-203ENST00000477538 A0A1W2PRB8 838 aa15.15■□□□□ 0.02
VHL-203ENST00000477538 RNASET2O00584 256 aaKnown RBP15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms