RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 ATAD3AQ9NVI7 634 aa3.56□□□□□ -1.84
UBR3-209ENST00000477461 COQ3Q9NZJ6 369 aa3.56□□□□□ -1.84
UBR3-209ENST00000477461 KLHL8Q9P2G9 620 aaPredicted RBP3.56□□□□□ -1.84
UBR3-209ENST00000477461 RHCGQ9UBD6 479 aa3.56□□□□□ -1.84
UBR3-209ENST00000477461 NOCTQ9UK39 431 aaKnown RBP3.56□□□□□ -1.84
UBR3-209ENST00000477461 EXOGQ9Y2C4 368 aaKnown RBP3.56□□□□□ -1.84
UBR3-209ENST00000477461 SPIN1Q9Y657 262 aaPredicted RBP3.56□□□□□ -1.84
UBR3-209ENST00000477461 PCNX3Q9H6A9 2034 aa3.56□□□□□ -1.84
UBR3-209ENST00000477461 PTPRDP23468 1912 aa3.56□□□□□ -1.84
UBR3-209ENST00000477461 MYO16Q9Y6X6 1858 aa3.56□□□□□ -1.84
UBR3-209ENST00000477461 COL4A4P53420 1690 aaPredicted RBP3.55□□□□□ -1.84
UBR3-209ENST00000477461 ZNF318Q5VUA4 2279 aa3.55□□□□□ -1.84
UBR3-209ENST00000477461 A0A087X0T9 212 aa3.55□□□□□ -1.84
UBR3-209ENST00000477461 MTMR11A4FU01 709 aa3.55□□□□□ -1.84
UBR3-209ENST00000477461 F8VP50 259 aa3.55□□□□□ -1.84
UBR3-209ENST00000477461 CLDN5O00501 218 aa3.55□□□□□ -1.84
UBR3-209ENST00000477461 XPO1O14980 1071 aaKnown RBP3.55□□□□□ -1.84
UBR3-209ENST00000477461 TEX28O15482 410 aa3.55□□□□□ -1.84
UBR3-209ENST00000477461 ZSCAN12O43309 604 aa3.55□□□□□ -1.84
UBR3-209ENST00000477461 ADAM20O43506 726 aa3.55□□□□□ -1.84
UBR3-209ENST00000477461 OR10H2O60403 315 aa3.55□□□□□ -1.84
UBR3-209ENST00000477461 RNASEH1O60930 286 aaKnown RBP3.55□□□□□ -1.84
UBR3-209ENST00000477461 H2AFZP0C0S5 128 aa3.55□□□□□ -1.84
UBR3-209ENST00000477461 CCDC175P0C221 793 aa3.55□□□□□ -1.84
UBR3-209ENST00000477461 DANCRP0C864 163 aa3.55□□□□□ -1.84
UBR3-209ENST00000477461 FAM228BP0C875 321 aa3.55□□□□□ -1.84
UBR3-209ENST00000477461 MYBL1P10243 752 aa3.55□□□□□ -1.84
UBR3-209ENST00000477461 HAPLN1P10915 354 aaPredicted RBP3.55□□□□□ -1.84
UBR3-209ENST00000477461 LIFP15018 202 aa3.55□□□□□ -1.84
UBR3-209ENST00000477461 CBLP22681 906 aa3.55□□□□□ -1.84
UBR3-209ENST00000477461 CYP2F1P24903 491 aa3.55□□□□□ -1.84
UBR3-209ENST00000477461 DEKP35659 375 aaKnown RBP3.55□□□□□ -1.84
UBR3-209ENST00000477461 RAD52P43351 418 aa3.55□□□□□ -1.84
UBR3-209ENST00000477461 MAGEA1P43355 309 aa3.55□□□□□ -1.84
UBR3-209ENST00000477461 MAGEA11P43364 429 aa3.55□□□□□ -1.84
UBR3-209ENST00000477461 RGS7P49802 495 aa3.55□□□□□ -1.84
UBR3-209ENST00000477461 MAP3K7CLP57077 242 aa3.55□□□□□ -1.84
UBR3-209ENST00000477461 RPS18P62269 152 aaKnown RBP3.55□□□□□ -1.84
UBR3-209ENST00000477461 GFPT1Q06210 699 aaPredicted RBP3.55□□□□□ -1.84
UBR3-209ENST00000477461 ENPP2Q13822 863 aa3.55□□□□□ -1.84
UBR3-209ENST00000477461 ZNF239Q16600 458 aaKnown RBP3.55□□□□□ -1.84
UBR3-209ENST00000477461 CFAP221Q4G0U5 840 aa3.55□□□□□ -1.84
UBR3-209ENST00000477461 PPM1LQ5SGD2 360 aa3.55□□□□□ -1.84
UBR3-209ENST00000477461 GPR139Q6DWJ6 353 aa3.55□□□□□ -1.84
UBR3-209ENST00000477461 OR6B2Q6IFH4 312 aa3.55□□□□□ -1.84
UBR3-209ENST00000477461 SLC8B1Q6J4K2 584 aa3.55□□□□□ -1.84
UBR3-209ENST00000477461 PWWP2BQ6NUJ5 590 aa3.55□□□□□ -1.84
UBR3-209ENST00000477461 ALKBH5Q6P6C2 394 aaKnown RBP3.55□□□□□ -1.84
UBR3-209ENST00000477461 WDR59Q6PJI9 974 aa3.55□□□□□ -1.84
UBR3-209ENST00000477461 FIGLAQ6QHK4 219 aa3.55□□□□□ -1.84
UBR3-209ENST00000477461 FAM198BQ6UWH4 519 aa3.55□□□□□ -1.84
UBR3-209ENST00000477461 CLEC20AQ6ZU45 233 aa3.55□□□□□ -1.84
UBR3-209ENST00000477461 H2AFVQ71UI9 128 aa3.55□□□□□ -1.84
UBR3-209ENST00000477461 ZNF571Q7Z3V5 609 aaPredicted RBP3.55□□□□□ -1.84
UBR3-209ENST00000477461 SH2D6Q7Z4S9 175 aa3.55□□□□□ -1.84
UBR3-209ENST00000477461 ITIH5Q86UX2 942 aa3.55□□□□□ -1.84
UBR3-209ENST00000477461 PIGZQ86VD9 579 aa3.55□□□□□ -1.84
UBR3-209ENST00000477461 MAML2Q8IZL2 1156 aaPredicted RBP3.55□□□□□ -1.84
UBR3-209ENST00000477461 MRPL43Q8N983 215 aaKnown RBP3.55□□□□□ -1.84
UBR3-209ENST00000477461 AVL9Q8NBF6 648 aa3.55□□□□□ -1.84
UBR3-209ENST00000477461 ATAD1Q8NBU5 361 aa3.55□□□□□ -1.84
UBR3-209ENST00000477461 ZNF461Q8TAF7 563 aa3.55□□□□□ -1.84
UBR3-209ENST00000477461 UBA3Q8TBC4 463 aa3.55□□□□□ -1.84
UBR3-209ENST00000477461 CTNNBL1Q8WYA6 563 aaPredicted RBP3.55□□□□□ -1.84
UBR3-209ENST00000477461 SECISBP2LQ93073 1101 aaKnown RBP3.55□□□□□ -1.84
UBR3-209ENST00000477461 MRPL38Q96DV4 380 aaKnown RBP3.55□□□□□ -1.84
UBR3-209ENST00000477461 SPACA9Q96E40 222 aaPredicted RBP3.55□□□□□ -1.84
UBR3-209ENST00000477461 MOCOSQ96EN8 888 aa3.55□□□□□ -1.84
UBR3-209ENST00000477461 SLC47A1Q96FL8 570 aa3.55□□□□□ -1.84
UBR3-209ENST00000477461 HSFY1Q96LI6 401 aa3.55□□□□□ -1.84
UBR3-209ENST00000477461 ZNF830Q96NB3 372 aaPredicted RBP3.55□□□□□ -1.84
UBR3-209ENST00000477461 MS4A10Q96PG2 267 aa3.55□□□□□ -1.84
UBR3-209ENST00000477461 GCNAQ96QF7 691 aa3.55□□□□□ -1.84
UBR3-209ENST00000477461 CDCA3Q99618 268 aaPredicted RBP3.55□□□□□ -1.84
UBR3-209ENST00000477461 RTP3Q9BQQ7 232 aa3.55□□□□□ -1.84
UBR3-209ENST00000477461 C11orf70Q9BRQ4 267 aa3.55□□□□□ -1.84
UBR3-209ENST00000477461 LMF2Q9BU23 707 aaKnown RBP3.55□□□□□ -1.84
UBR3-209ENST00000477461 LHX5Q9H2C1 402 aa3.55□□□□□ -1.84
UBR3-209ENST00000477461 ARRDC1-AS1Q9H2J1 176 aa3.55□□□□□ -1.84
UBR3-209ENST00000477461 PRO3102Q9H379 93 aa3.55□□□□□ -1.84
UBR3-209ENST00000477461 FBXO44Q9H4M3 255 aa3.55□□□□□ -1.84
UBR3-209ENST00000477461 TLE6Q9H808 572 aa3.55□□□□□ -1.84
UBR3-209ENST00000477461 ACKR4Q9NPB9 350 aa3.55□□□□□ -1.84
UBR3-209ENST00000477461 SLC35C2Q9NQQ7 365 aa3.55□□□□□ -1.84
UBR3-209ENST00000477461 PLCXD1Q9NUJ7 323 aa3.55□□□□□ -1.84
UBR3-209ENST00000477461 ZNF701Q9NV72 531 aaPredicted RBP3.55□□□□□ -1.84
UBR3-209ENST00000477461 C2orf42Q9NWW7 574 aa3.55□□□□□ -1.84
UBR3-209ENST00000477461 ADAM22Q9P0K1 906 aa3.55□□□□□ -1.84
UBR3-209ENST00000477461 TMEM181Q9P2C4 612 aa3.55□□□□□ -1.84
UBR3-209ENST00000477461 WDR35Q9P2L0 1181 aa3.55□□□□□ -1.84
UBR3-209ENST00000477461 ANAPC2Q9UJX6 822 aa3.55□□□□□ -1.84
UBR3-209ENST00000477461 PPIEQ9UNP9 301 aaKnown RBP3.55□□□□□ -1.84
UBR3-209ENST00000477461 PLXNA3P51805 1871 aa3.55□□□□□ -1.84
UBR3-209ENST00000477461 MYO7AQ13402 2215 aa3.55□□□□□ -1.84
UBR3-209ENST00000477461 ZNF638Q14966 1978 aaKnown RBP3.54□□□□□ -1.84
UBR3-209ENST00000477461 PATJQ8NI35 1801 aa3.54□□□□□ -1.84
UBR3-209ENST00000477461 FAM170AA1A519 330 aa3.54□□□□□ -1.84
UBR3-209ENST00000477461 ANKUB1A6NFN9 424 aa3.54□□□□□ -1.84
UBR3-209ENST00000477461 A8MV72 311 aaPredicted RBP3.54□□□□□ -1.84
UBR3-209ENST00000477461 HIDE1A8MVS5 230 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms