RNA–Protein interactions for RNA: ENST00000477289.1

NSMCE4A-208, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, humanhuman

TSL 2

Gene NSMCE4A, Length 643 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4A-208ENST00000477289 FGF21Q9NSA1 209 aa4.29□□□□□ -1.72
NSMCE4A-208ENST00000477289 CCM2LQ9NUG4 571 aaPredicted RBP4.29□□□□□ -1.72
NSMCE4A-208ENST00000477289 TMEM140Q9NV12 185 aa4.29□□□□□ -1.72
NSMCE4A-208ENST00000477289 C14orf119Q9NWQ9 140 aa4.29□□□□□ -1.72
NSMCE4A-208ENST00000477289 XPR1Q9UBH6 696 aa4.29□□□□□ -1.72
NSMCE4A-208ENST00000477289 LGALS13Q9UHV8 139 aa4.29□□□□□ -1.72
NSMCE4A-208ENST00000477289 CDC14AQ9UNH5 594 aa4.29□□□□□ -1.72
NSMCE4A-208ENST00000477289 SATB2Q9UPW6 733 aa4.29□□□□□ -1.72
NSMCE4A-208ENST00000477289 RUVBL1Q9Y265 456 aaKnown RBP4.29□□□□□ -1.72
NSMCE4A-208ENST00000477289 TMA7Q9Y2S6 64 aaKnown RBP4.29□□□□□ -1.72
NSMCE4A-208ENST00000477289 PCDHGA8Q9Y5G5 932 aa4.29□□□□□ -1.72
NSMCE4A-208ENST00000477289 U3KQA8 63 aa4.29□□□□□ -1.72
NSMCE4A-208ENST00000477289 GPR179Q6PRD1 2367 aa4.29□□□□□ -1.72
NSMCE4A-208ENST00000477289 LRP4O75096 1905 aa4.29□□□□□ -1.72
NSMCE4A-208ENST00000477289 PIKFYVEQ9Y2I7 2098 aa4.28□□□□□ -1.72
NSMCE4A-208ENST00000477289 ASCC3Q8N3C0 2202 aaKnown RBP4.28□□□□□ -1.72
NSMCE4A-208ENST00000477289 ZFC3H1O60293 1989 aaKnown RBP4.28□□□□□ -1.72
NSMCE4A-208ENST00000477289 PRAMEF33A0A0G2JMD5 474 aa4.28□□□□□ -1.72
NSMCE4A-208ENST00000477289 A0A0J9YVX5 310 aa4.28□□□□□ -1.72
NSMCE4A-208ENST00000477289 A0A1W2PPM1 405 aa4.28□□□□□ -1.72
NSMCE4A-208ENST00000477289 FAM149AA5PLN7 773 aa4.28□□□□□ -1.72
NSMCE4A-208ENST00000477289 CDHR4A6H8M9 788 aa4.28□□□□□ -1.72
NSMCE4A-208ENST00000477289 TMEM8BA6NDV4 472 aa4.28□□□□□ -1.72
NSMCE4A-208ENST00000477289 TRABD2BA6NFA1 517 aa4.28□□□□□ -1.72
NSMCE4A-208ENST00000477289 HMGB1P1B2RPK0 211 aaPredicted RBP4.28□□□□□ -1.72
NSMCE4A-208ENST00000477289 TMEM150CB9EJG8 249 aa4.28□□□□□ -1.72
NSMCE4A-208ENST00000477289 C9J4A7 227 aa4.28□□□□□ -1.72
NSMCE4A-208ENST00000477289 STMND1H3BQB6 276 aa4.28□□□□□ -1.72
NSMCE4A-208ENST00000477289 UBXN8O00124 270 aa4.28□□□□□ -1.72
NSMCE4A-208ENST00000477289 MAP2K7O14733 419 aa4.28□□□□□ -1.72
NSMCE4A-208ENST00000477289 TM9SF1O15321 606 aa4.28□□□□□ -1.72
NSMCE4A-208ENST00000477289 ZSCAN9O15535 394 aaPredicted RBP4.28□□□□□ -1.72
NSMCE4A-208ENST00000477289 ATP8B1O43520 1251 aa4.28□□□□□ -1.72
NSMCE4A-208ENST00000477289 KIF1CO43896 1103 aaKnown RBP4.28□□□□□ -1.72
NSMCE4A-208ENST00000477289 RFPL1O75677 317 aa4.28□□□□□ -1.72
NSMCE4A-208ENST00000477289 SCRG1O75711 98 aa4.28□□□□□ -1.72
NSMCE4A-208ENST00000477289 OR2B3O76000 313 aa4.28□□□□□ -1.72
NSMCE4A-208ENST00000477289 SNUPNO95149 360 aaKnown RBP4.28□□□□□ -1.72
NSMCE4A-208ENST00000477289 CLDN9O95484 217 aa4.28□□□□□ -1.72
NSMCE4A-208ENST00000477289 MLYCDO95822 493 aa4.28□□□□□ -1.72
NSMCE4A-208ENST00000477289 TSPAN12O95859 305 aa4.28□□□□□ -1.72
NSMCE4A-208ENST00000477289 OTCP00480 354 aa4.28□□□□□ -1.72
NSMCE4A-208ENST00000477289 C1GALT1C1LP0DN25 315 aa4.28□□□□□ -1.72
NSMCE4A-208ENST00000477289 ERGP11308 486 aa4.28□□□□□ -1.72
NSMCE4A-208ENST00000477289 ST6GAL1P15907 406 aa4.28□□□□□ -1.72
NSMCE4A-208ENST00000477289 CPEP16870 476 aa4.28□□□□□ -1.72
NSMCE4A-208ENST00000477289 ITGAXP20702 1163 aa4.28□□□□□ -1.72
NSMCE4A-208ENST00000477289 EEF1DP29692 281 aaKnown RBP4.28□□□□□ -1.72
NSMCE4A-208ENST00000477289 HMOX2P30519 316 aa4.28□□□□□ -1.72
NSMCE4A-208ENST00000477289 HNF4AP41235 474 aa4.28□□□□□ -1.72
NSMCE4A-208ENST00000477289 GRIA3P42263 894 aa4.28□□□□□ -1.72
NSMCE4A-208ENST00000477289 MAGEA12P43365 314 aa4.28□□□□□ -1.72
NSMCE4A-208ENST00000477289 HSPA7P48741 367 aa4.28□□□□□ -1.72
NSMCE4A-208ENST00000477289 RAP1GDS1P52306 607 aa4.28□□□□□ -1.72
NSMCE4A-208ENST00000477289 ERVPABLB-1P60509 514 aa4.28□□□□□ -1.72
NSMCE4A-208ENST00000477289 STXBP1P61764 594 aaKnown RBP4.28□□□□□ -1.72
NSMCE4A-208ENST00000477289 RPS15P62841 145 aaKnown RBP4.28□□□□□ -1.72
NSMCE4A-208ENST00000477289 MC2RQ01718 297 aa4.28□□□□□ -1.72
NSMCE4A-208ENST00000477289 RELAQ04206 551 aa4.28□□□□□ -1.72
NSMCE4A-208ENST00000477289 SLC18A2Q05940 514 aa4.28□□□□□ -1.72
NSMCE4A-208ENST00000477289 ZNF844Q08AG5 666 aa4.28□□□□□ -1.72
NSMCE4A-208ENST00000477289 FAPQ12884 760 aa4.28□□□□□ -1.72
NSMCE4A-208ENST00000477289 IFT88Q13099 833 aa4.28□□□□□ -1.72
NSMCE4A-208ENST00000477289 CHIT1Q13231 466 aa4.28□□□□□ -1.72
NSMCE4A-208ENST00000477289 GTF2H2Q13888 395 aa4.28□□□□□ -1.72
NSMCE4A-208ENST00000477289 RCN2Q14257 317 aa4.28□□□□□ -1.72
NSMCE4A-208ENST00000477289 PCBP2Q15366 365 aaKnown RBP eCLIP4.28□□□□□ -1.72
NSMCE4A-208ENST00000477289 PPP1R3AQ16821 1122 aa4.28□□□□□ -1.72
NSMCE4A-208ENST00000477289 CCSMST1Q4G0I0 132 aa4.28□□□□□ -1.72
NSMCE4A-208ENST00000477289 TECRLQ5HYJ1 363 aa4.28□□□□□ -1.72
NSMCE4A-208ENST00000477289 MANEAQ5SRI9 462 aa4.28□□□□□ -1.72
NSMCE4A-208ENST00000477289 C10orf62Q5T681 223 aaPredicted RBP4.28□□□□□ -1.72
NSMCE4A-208ENST00000477289 AGBL2Q5U5Z8 902 aa4.28□□□□□ -1.72
NSMCE4A-208ENST00000477289 LIPJQ5W064 366 aa4.28□□□□□ -1.72
NSMCE4A-208ENST00000477289 ATG16L1Q676U5 607 aa4.28□□□□□ -1.72
NSMCE4A-208ENST00000477289 GTF2H2CQ6P1K8 395 aa4.28□□□□□ -1.72
NSMCE4A-208ENST00000477289 SBSNQ6UWP8 590 aa4.28□□□□□ -1.72
NSMCE4A-208ENST00000477289 TMEM207Q6UWW9 146 aa4.28□□□□□ -1.72
NSMCE4A-208ENST00000477289 ABHD13Q7L211 337 aa4.28□□□□□ -1.72
NSMCE4A-208ENST00000477289 TMPRSS11BQ86T26 416 aa4.28□□□□□ -1.72
NSMCE4A-208ENST00000477289 ISCA2Q86U28 154 aa4.28□□□□□ -1.72
NSMCE4A-208ENST00000477289 TRABD2AQ86V40 505 aa4.28□□□□□ -1.72
NSMCE4A-208ENST00000477289 NUDCD3Q8IVD9 361 aa4.28□□□□□ -1.72
NSMCE4A-208ENST00000477289 IQCKQ8N0W5 287 aa4.28□□□□□ -1.72
NSMCE4A-208ENST00000477289 ESX1Q8N693 406 aa4.28□□□□□ -1.72
NSMCE4A-208ENST00000477289 ARFGAP2Q8N6H7 521 aa4.28□□□□□ -1.72
NSMCE4A-208ENST00000477289 TEX9Q8N6V9 391 aa4.28□□□□□ -1.72
NSMCE4A-208ENST00000477289 CCNYL1Q8N7R7 359 aa4.28□□□□□ -1.72
NSMCE4A-208ENST00000477289 PTGR2Q8N8N7 351 aaPredicted RBP4.28□□□□□ -1.72
NSMCE4A-208ENST00000477289 PDPRQ8NCN5 879 aa4.28□□□□□ -1.72
NSMCE4A-208ENST00000477289 C7orf57Q8NEG2 295 aa4.28□□□□□ -1.72
NSMCE4A-208ENST00000477289 OR56A3Q8NH54 315 aa4.28□□□□□ -1.72
NSMCE4A-208ENST00000477289 PYCR2Q96C36 320 aa4.28□□□□□ -1.72
NSMCE4A-208ENST00000477289 RHBDF1Q96CC6 855 aa4.28□□□□□ -1.72
NSMCE4A-208ENST00000477289 PRR11Q96HE9 360 aaPredicted RBP4.28□□□□□ -1.72
NSMCE4A-208ENST00000477289 SLC41A2Q96JW4 573 aa4.28□□□□□ -1.72
NSMCE4A-208ENST00000477289 PRAP1Q96NZ9 151 aa4.28□□□□□ -1.72
NSMCE4A-208ENST00000477289 DDA1Q9BW61 102 aa4.28□□□□□ -1.72
NSMCE4A-208ENST00000477289 PITPNM3Q9BZ71 974 aa4.28□□□□□ -1.72
NSMCE4A-208ENST00000477289 ULBP3Q9BZM4 244 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms