RNA–Protein interactions for RNA: ENST00000476367.5

CCNL1-217, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-217ENST00000476367 ZFP36L2P47974 494 aaKnown RBP13.48□□□□□ -0.25
CCNL1-217ENST00000476367 HSD17B7P56937 341 aa13.48□□□□□ -0.25
CCNL1-217ENST00000476367 OR4D2P58180 307 aa13.48□□□□□ -0.25
CCNL1-217ENST00000476367 TRA2BP62995 288 aaKnown RBP13.48□□□□□ -0.25
CCNL1-217ENST00000476367 DUSP2Q05923 314 aa13.48□□□□□ -0.25
CCNL1-217ENST00000476367 MPEG1Q2M385 716 aa13.48□□□□□ -0.25
CCNL1-217ENST00000476367 PCSK4Q6UW60 755 aa13.48□□□□□ -0.25
CCNL1-217ENST00000476367 C10orf82Q8WW14 230 aa13.48□□□□□ -0.25
CCNL1-217ENST00000476367 MARK4Q96L34 752 aa13.48□□□□□ -0.25
CCNL1-217ENST00000476367 UBL7Q96S82 380 aaPredicted RBP13.48□□□□□ -0.25
CCNL1-217ENST00000476367 ZNF385DQ9H6B1 395 aa13.48□□□□□ -0.25
CCNL1-217ENST00000476367 MS4A12Q9NXJ0 267 aa13.48□□□□□ -0.25
CCNL1-217ENST00000476367 PCDHA9Q9Y5H5 950 aa13.48□□□□□ -0.25
CCNL1-217ENST00000476367 GPR45Q9Y5Y3 372 aa13.48□□□□□ -0.25
CCNL1-217ENST00000476367 GNG14A0A1W2PPG7 69 aa13.47□□□□□ -0.25
CCNL1-217ENST00000476367 TCRBV16S1A1N1A0A5B0 115 aa13.47□□□□□ -0.25
CCNL1-217ENST00000476367 GMNCA6NCL1 334 aa13.47□□□□□ -0.25
CCNL1-217ENST00000476367 A8MUA0 341 aa13.47□□□□□ -0.25
CCNL1-217ENST00000476367 VPS4BO75351 444 aa13.47□□□□□ -0.25
CCNL1-217ENST00000476367 CELA2AP08217 269 aa13.47□□□□□ -0.25
CCNL1-217ENST00000476367 ITGA3P26006 1051 aa13.47□□□□□ -0.25
CCNL1-217ENST00000476367 PPP2R1BP30154 601 aa13.47□□□□□ -0.25
CCNL1-217ENST00000476367 TLX1P31314 330 aaPredicted RBP13.47□□□□□ -0.25
CCNL1-217ENST00000476367 IGLV3-21P80748 117 aaPredicted RBP13.47□□□□□ -0.25
CCNL1-217ENST00000476367 ACTN3Q08043 901 aaPredicted RBP13.47□□□□□ -0.25
CCNL1-217ENST00000476367 AIMP2Q13155 320 aaKnown RBP13.47□□□□□ -0.25
CCNL1-217ENST00000476367 KCNAB2Q13303 367 aa13.47□□□□□ -0.25
CCNL1-217ENST00000476367 ZNF750Q32MQ0 723 aa13.47□□□□□ -0.25
CCNL1-217ENST00000476367 ZNF385BQ569K4 471 aa13.47□□□□□ -0.25
CCNL1-217ENST00000476367 PAPD4Q6PIY7 484 aaKnown RBP13.47□□□□□ -0.25
CCNL1-217ENST00000476367 NDUFAF7Q7L592 441 aa13.47□□□□□ -0.25
CCNL1-217ENST00000476367 OR4N5Q8IXE1 308 aa13.47□□□□□ -0.25
CCNL1-217ENST00000476367 KRTCAP2Q8N6L1 136 aa13.47□□□□□ -0.25
CCNL1-217ENST00000476367 CEP70Q8NHQ1 597 aa13.47□□□□□ -0.25
CCNL1-217ENST00000476367 CDC26Q8NHZ8 85 aa13.47□□□□□ -0.25
CCNL1-217ENST00000476367 ZNF681Q96N22 645 aa13.47□□□□□ -0.25
CCNL1-217ENST00000476367 TMEM120AQ9BXJ8 343 aa13.47□□□□□ -0.25
CCNL1-217ENST00000476367 BRINP2Q9C0B6 783 aa13.47□□□□□ -0.25
CCNL1-217ENST00000476367 ZNF700Q9H0M5 742 aa13.47□□□□□ -0.25
CCNL1-217ENST00000476367 RPF2Q9H7B2 306 aaKnown RBP13.47□□□□□ -0.25
CCNL1-217ENST00000476367 ATP13A2Q9NQ11 1180 aa13.47□□□□□ -0.25
CCNL1-217ENST00000476367 TCF7L2Q9NQB0 619 aa13.47□□□□□ -0.25
CCNL1-217ENST00000476367 AIG1Q9NVV5 245 aa13.47□□□□□ -0.25
CCNL1-217ENST00000476367 ATRXP46100 2492 aa13.47□□□□□ -0.25
CCNL1-217ENST00000476367 A0A0G2JND7 137 aa13.46□□□□□ -0.25
CCNL1-217ENST00000476367 A0A1W2PQ72 361 aa13.46□□□□□ -0.25
CCNL1-217ENST00000476367 E9PBE3 544 aa13.46□□□□□ -0.25
CCNL1-217ENST00000476367 MKRN2OSH3BPM6 223 aa13.46□□□□□ -0.25
CCNL1-217ENST00000476367 KALRNO60229 2985 aa13.46□□□□□ -0.25
CCNL1-217ENST00000476367 KLHL41O60662 606 aa13.46□□□□□ -0.25
CCNL1-217ENST00000476367 IL12AP29459 219 aa13.46□□□□□ -0.25
CCNL1-217ENST00000476367 Q0VFX4 171 aa13.46□□□□□ -0.25
CCNL1-217ENST00000476367 STX4Q12846 297 aa13.46□□□□□ -0.25
CCNL1-217ENST00000476367 PDE7AQ13946 482 aa13.46□□□□□ -0.25
CCNL1-217ENST00000476367 SLC48A1Q6P1K1 146 aa13.46□□□□□ -0.25
CCNL1-217ENST00000476367 DGAT2L6Q6ZPD8 337 aa13.46□□□□□ -0.25
CCNL1-217ENST00000476367 GALNT16Q8N428 558 aa13.46□□□□□ -0.25
CCNL1-217ENST00000476367 EXD3Q8N9H8 876 aa13.46□□□□□ -0.25
CCNL1-217ENST00000476367 GFM2Q969S9 779 aaKnown RBP13.46□□□□□ -0.25
CCNL1-217ENST00000476367 CNRIP1Q96F85 164 aaPredicted RBP13.46□□□□□ -0.25
CCNL1-217ENST00000476367 LPAR4Q99677 370 aa13.46□□□□□ -0.25
CCNL1-217ENST00000476367 WDR77Q9BQA1 342 aaPredicted RBP13.46□□□□□ -0.25
CCNL1-217ENST00000476367 TUBB6Q9BUF5 446 aa13.46□□□□□ -0.25
CCNL1-217ENST00000476367 RABEP2Q9H5N1 569 aa13.46□□□□□ -0.25
CCNL1-217ENST00000476367 WDR41Q9HAD4 459 aa13.46□□□□□ -0.25
CCNL1-217ENST00000476367 PNO1Q9NRX1 252 aaKnown RBP13.46□□□□□ -0.25
CCNL1-217ENST00000476367 NOP53Q9NZM5 478 aaKnown RBP13.46□□□□□ -0.25
CCNL1-217ENST00000476367 SPENQ96T58 3664 aaKnown RBP13.46□□□□□ -0.25
CCNL1-217ENST00000476367 GABRR3A8MPY1 467 aa13.46□□□□□ -0.26
CCNL1-217ENST00000476367 CTNSO60931 367 aa13.46□□□□□ -0.26
CCNL1-217ENST00000476367 LRATO95237 230 aa13.46□□□□□ -0.26
CCNL1-217ENST00000476367 C21orf58P58505 322 aa13.46□□□□□ -0.26
CCNL1-217ENST00000476367 PHC1P78364 1004 aa13.46□□□□□ -0.26
CCNL1-217ENST00000476367 FOLH1Q04609 750 aa13.46□□□□□ -0.26
CCNL1-217ENST00000476367 BTBD16Q32M84 506 aa13.46□□□□□ -0.26
CCNL1-217ENST00000476367 ANKRD26P1Q6NSI1 321 aa13.46□□□□□ -0.26
CCNL1-217ENST00000476367 FDCSPQ8NFU4 85 aa13.46□□□□□ -0.26
CCNL1-217ENST00000476367 ABHD17AQ96GS6 310 aa13.46□□□□□ -0.26
CCNL1-217ENST00000476367 THOC3Q96J01 351 aaKnown RBP13.46□□□□□ -0.26
CCNL1-217ENST00000476367 CCDC28BQ9BUN5 200 aa13.46□□□□□ -0.26
CCNL1-217ENST00000476367 SLC25A23Q9BV35 468 aa13.46□□□□□ -0.26
CCNL1-217ENST00000476367 SLAMF7Q9NQ25 335 aa13.46□□□□□ -0.26
CCNL1-217ENST00000476367 PFDN4Q9NQP4 134 aa13.46□□□□□ -0.26
CCNL1-217ENST00000476367 GPR83Q9NYM4 423 aa13.46□□□□□ -0.26
CCNL1-217ENST00000476367 KLHL14Q9P2G3 628 aa13.46□□□□□ -0.26
CCNL1-217ENST00000476367 ERVK-11Q9UQG0 969 aa13.46□□□□□ -0.26
CCNL1-217ENST00000476367 BLACEA4D250 179 aa13.45□□□□□ -0.26
CCNL1-217ENST00000476367 SNX3O60493 162 aa13.45□□□□□ -0.26
CCNL1-217ENST00000476367 MYO1DO94832 1006 aa13.45□□□□□ -0.26
CCNL1-217ENST00000476367 IFNA16P05015 189 aa13.45□□□□□ -0.26
CCNL1-217ENST00000476367 PRPS2P11908 318 aa13.45□□□□□ -0.26
CCNL1-217ENST00000476367 DDCP20711 480 aa13.45□□□□□ -0.26
CCNL1-217ENST00000476367 ALDH9A1P49189 494 aa13.45□□□□□ -0.26
CCNL1-217ENST00000476367 CLDN8P56748 225 aa13.45□□□□□ -0.26
CCNL1-217ENST00000476367 UFM1P61960 85 aa13.45□□□□□ -0.26
CCNL1-217ENST00000476367 C2orf80Q0P641 193 aa13.45□□□□□ -0.26
CCNL1-217ENST00000476367 CEBPEQ15744 281 aa13.45□□□□□ -0.26
CCNL1-217ENST00000476367 IRAK1BP1Q5VVH5 260 aa13.45□□□□□ -0.26
CCNL1-217ENST00000476367 NXNQ6DKJ4 435 aa13.45□□□□□ -0.26
CCNL1-217ENST00000476367 OR52E8Q6IFG1 317 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms