RNA–Protein interactions for RNA: ENST00000476342.1

HOXB3-208, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 1,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-208ENST00000476342 C2orf80Q0P641 193 aa27.63■■■□□ 2.01
HOXB3-208ENST00000476342 JMJD6Q6NYC1 403 aaPredicted RBP27.63■■■□□ 2.01
HOXB3-208ENST00000476342 MMP21Q8N119 569 aa27.63■■■□□ 2.01
HOXB3-208ENST00000476342 KLHL29Q96CT2 875 aa27.63■■■□□ 2.01
HOXB3-208ENST00000476342 ABHD17AQ96GS6 310 aa27.63■■■□□ 2.01
HOXB3-208ENST00000476342 MMP25Q9NPA2 562 aa27.63■■■□□ 2.01
HOXB3-208ENST00000476342 EHD3Q9NZN3 535 aa27.63■■■□□ 2.01
HOXB3-208ENST00000476342 HEY2Q9UBP5 337 aa27.63■■■□□ 2.01
HOXB3-208ENST00000476342 UTS2RQ9UKP6 389 aa27.63■■■□□ 2.01
HOXB3-208ENST00000476342 ERAL1O75616 437 aaKnown RBP27.62■■■□□ 2.01
HOXB3-208ENST00000476342 SDC1P18827 310 aa27.62■■■□□ 2.01
HOXB3-208ENST00000476342 DDCP20711 480 aa27.62■■■□□ 2.01
HOXB3-208ENST00000476342 RAPSNQ13702 412 aa27.62■■■□□ 2.01
HOXB3-208ENST00000476342 SMU1Q2TAY7 513 aa27.62■■■□□ 2.01
HOXB3-208ENST00000476342 FAM71E1Q6IPT2 247 aa27.62■■■□□ 2.01
HOXB3-208ENST00000476342 LSM14AQ8ND56 463 aaKnown RBP27.62■■■□□ 2.01
HOXB3-208ENST00000476342 B3GNT7Q8NFL0 401 aa27.62■■■□□ 2.01
HOXB3-208ENST00000476342 PUM2Q8TB72 1066 aaKnown RBP eCLIP27.62■■■□□ 2.019e-7■■□□□ 12.2
HOXB3-208ENST00000476342 MIEF1Q9NQG6 463 aa27.62■■■□□ 2.01
HOXB3-208ENST00000476342 C5AR2Q9P296 337 aa27.62■■■□□ 2.01
HOXB3-208ENST00000476342 ZNF780BQ9Y6R6 833 aa27.62■■■□□ 2.01
HOXB3-208ENST00000476342 PIEZO2Q9H5I5 2752 aa27.61■■■□□ 2.01
HOXB3-208ENST00000476342 C17orf105B2RV13 164 aa27.61■■■□□ 2.01
HOXB3-208ENST00000476342 ATXN7O15265 892 aaPredicted RBP27.61■■■□□ 2.01
HOXB3-208ENST00000476342 ALPPP05187 535 aa27.61■■■□□ 2.01
HOXB3-208ENST00000476342 CELA2AP08217 269 aa27.61■■■□□ 2.01
HOXB3-208ENST00000476342 SLC35E2P0CK97 266 aa27.61■■■□□ 2.01
HOXB3-208ENST00000476342 ASMTP46597 345 aa27.61■■■□□ 2.01
HOXB3-208ENST00000476342 XKP51811 444 aa27.61■■■□□ 2.01
HOXB3-208ENST00000476342 PCSK4Q6UW60 755 aa27.61■■■□□ 2.01
HOXB3-208ENST00000476342 LRRC34Q8IZ02 419 aa27.61■■■□□ 2.01
HOXB3-208ENST00000476342 SAMD14Q8IZD0 417 aaPredicted RBP27.61■■■□□ 2.01
HOXB3-208ENST00000476342 EXD3Q8N9H8 876 aa27.61■■■□□ 2.01
HOXB3-208ENST00000476342 C9orf43Q8TAL5 461 aaPredicted RBP27.61■■■□□ 2.01
HOXB3-208ENST00000476342 NUDT9Q9BW91 350 aa27.61■■■□□ 2.01
HOXB3-208ENST00000476342 AKTIPQ9H8T0 292 aa27.61■■■□□ 2.01
HOXB3-208ENST00000476342 EIF3LQ9Y262 564 aaKnown RBP27.61■■■□□ 2.01
HOXB3-208ENST00000476342 PCDHGB7Q9Y5F8 929 aa27.61■■■□□ 2.01
HOXB3-208ENST00000476342 BCKDHAP12694 445 aa27.6■■■□□ 2.01
HOXB3-208ENST00000476342 TACR1P25103 407 aa27.6■■■□□ 2.01
HOXB3-208ENST00000476342 VWA5B1Q5TIE3 1220 aa27.6■■■□□ 2.01
HOXB3-208ENST00000476342 AGAP7PQ5VUJ5 663 aa27.6■■■□□ 2.01
HOXB3-208ENST00000476342 TCTN3Q6NUS6 607 aa27.6■■■□□ 2.01
HOXB3-208ENST00000476342 RGS9BPQ6ZS82 235 aa27.6■■■□□ 2.01
HOXB3-208ENST00000476342 WDR75Q8IWA0 830 aaKnown RBP27.6■■■□□ 2.01
HOXB3-208ENST00000476342 MORN4Q8NDC4 146 aa27.6■■■□□ 2.01
HOXB3-208ENST00000476342 NFAM1Q8NET5 270 aaPredicted RBP27.6■■■□□ 2.01
HOXB3-208ENST00000476342 BRIX1Q8TDN6 353 aaKnown RBP27.6■■■□□ 2.01
HOXB3-208ENST00000476342 PTPMT1Q8WUK0 201 aaPredicted RBP27.6■■■□□ 2.01
HOXB3-208ENST00000476342 AGAP4Q96P64 663 aa27.6■■■□□ 2.01
HOXB3-208ENST00000476342 TSSK3Q96PN8 268 aa27.6■■■□□ 2.01
HOXB3-208ENST00000476342 C1orf50Q9BV19 199 aa27.6■■■□□ 2.01
HOXB3-208ENST00000476342 ZNF552Q9H707 407 aaPredicted RBP27.6■■■□□ 2.01
HOXB3-208ENST00000476342 SLCO1B3Q9NPD5 702 aa27.6■■■□□ 2.01
HOXB3-208ENST00000476342 GIMAP4Q9NUV9 329 aa27.6■■■□□ 2.01
HOXB3-208ENST00000476342 PPIEQ9UNP9 301 aaKnown RBP27.6■■■□□ 2.01
HOXB3-208ENST00000476342 ITGAMP11215 1152 aa27.59■■■□□ 2.01
HOXB3-208ENST00000476342 PRPS2P11908 318 aa27.59■■■□□ 2.01
HOXB3-208ENST00000476342 CPMP14384 443 aa27.59■■■□□ 2.01
HOXB3-208ENST00000476342 PORP16435 677 aaPredicted RBP27.59■■■□□ 2.01
HOXB3-208ENST00000476342 GALNSP34059 522 aa27.59■■■□□ 2.01
HOXB3-208ENST00000476342 PGDP52209 483 aa27.59■■■□□ 2.01
HOXB3-208ENST00000476342 ELP5Q8TE02 316 aa27.59■■■□□ 2.01
HOXB3-208ENST00000476342 PPWD1Q96BP3 646 aaKnown RBP27.59■■■□□ 2.01
HOXB3-208ENST00000476342 VMP1Q96GC9 406 aa27.59■■■□□ 2.01
HOXB3-208ENST00000476342 EGLN2Q96KS0 407 aa27.59■■■□□ 2.01
HOXB3-208ENST00000476342 ART5Q96L15 291 aa27.59■■■□□ 2.01
HOXB3-208ENST00000476342 KCNK13Q9HB14 408 aa27.59■■■□□ 2.01
HOXB3-208ENST00000476342 ZFYVE26Q68DK2 2539 aa27.59■■■□□ 2.01
HOXB3-208ENST00000476342 CSNK2A2P19784 350 aaPredicted RBP27.58■■■□□ 2.01
HOXB3-208ENST00000476342 CLCN2P51788 898 aa27.58■■■□□ 2.01
HOXB3-208ENST00000476342 ERVK-8P63133 956 aa27.58■■■□□ 2.01
HOXB3-208ENST00000476342 EMX2Q04743 252 aa27.58■■■□□ 2.01
HOXB3-208ENST00000476342 LY6DQ14210 128 aa27.58■■■□□ 2.01
HOXB3-208ENST00000476342 IL23RQ5VWK5 629 aa27.58■■■□□ 2.01
HOXB3-208ENST00000476342 LIX1Q8N485 282 aa27.58■■■□□ 2.01
HOXB3-208ENST00000476342 EXOSC8Q96B26 276 aaKnown RBP27.58■■■□□ 2.01
HOXB3-208ENST00000476342 SMAD5Q99717 465 aaKnown RBP27.58■■■□□ 2.01
HOXB3-208ENST00000476342 NOP53Q9NZM5 478 aaKnown RBP27.58■■■□□ 2.01
HOXB3-208ENST00000476342 ENTPD4Q9Y227 616 aa27.58■■■□□ 2.01
HOXB3-208ENST00000476342 IGSF10Q6WRI0 2623 aa27.58■■■□□ 2.01
HOXB3-208ENST00000476342 LBPP18428 481 aa27.58■■■□□ 2
HOXB3-208ENST00000476342 SPRED3Q2MJR0 410 aa27.58■■■□□ 2
HOXB3-208ENST00000476342 LACTB2Q53H82 288 aaPredicted RBP27.58■■■□□ 2
HOXB3-208ENST00000476342 CRB2Q5IJ48 1285 aa27.58■■■□□ 2
HOXB3-208ENST00000476342 C6orf163Q5TEZ5 329 aa27.58■■■□□ 2
HOXB3-208ENST00000476342 APCDD1LQ8NCL9 501 aa27.58■■■□□ 2
HOXB3-208ENST00000476342 SLC2A12Q8TD20 617 aa27.58■■■□□ 2
HOXB3-208ENST00000476342 RIT1Q92963 219 aa27.58■■■□□ 2
HOXB3-208ENST00000476342 NCLNQ969V3 563 aa27.58■■■□□ 2
HOXB3-208ENST00000476342 ASIC5Q9NY37 505 aa27.58■■■□□ 2
HOXB3-208ENST00000476342 COPS7AQ9UBW8 275 aa27.58■■■□□ 2
HOXB3-208ENST00000476342 BAIAP2L1Q9UHR4 511 aa27.58■■■□□ 2
HOXB3-208ENST00000476342 TEKT2Q9UIF3 430 aa27.58■■■□□ 2
HOXB3-208ENST00000476342 TP53TG5Q9Y2B4 290 aa27.58■■■□□ 2
HOXB3-208ENST00000476342 ZNF451Q9Y4E5 1061 aa27.58■■■□□ 2
HOXB3-208ENST00000476342 SDHDO14521 159 aa27.57■■■□□ 2
HOXB3-208ENST00000476342 FEN1P39748 380 aaKnown RBP27.57■■■□□ 2
HOXB3-208ENST00000476342 FAM47EQ6ZV65 393 aa27.57■■■□□ 2
HOXB3-208ENST00000476342 TICAM1Q8IUC6 712 aa27.57■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms