RNA–Protein interactions for RNA: ENST00000475772.5

CALD1-217, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-217ENST00000475772 JRKLQ9Y4A0 524 aa9.63□□□□□ -0.87
CALD1-217ENST00000475772 ATG4BQ9Y4P1 393 aa9.63□□□□□ -0.87
CALD1-217ENST00000475772 TEX264Q9Y6I9 313 aa9.63□□□□□ -0.87
CALD1-217ENST00000475772 KDM4EB2RXH2 506 aaPredicted RBP9.62□□□□□ -0.87
CALD1-217ENST00000475772 BCKDKO14874 412 aa9.62□□□□□ -0.87
CALD1-217ENST00000475772 TP73O15350 636 aa9.62□□□□□ -0.87
CALD1-217ENST00000475772 B3GALT2O43825 422 aa9.62□□□□□ -0.87
CALD1-217ENST00000475772 SUSD5O60279 629 aa9.62□□□□□ -0.87
CALD1-217ENST00000475772 H2AFYO75367 372 aaKnown RBP9.62□□□□□ -0.87
CALD1-217ENST00000475772 RFPL3SP0C7P2 107 aa9.62□□□□□ -0.87
CALD1-217ENST00000475772 GNAZP19086 355 aa9.62□□□□□ -0.87
CALD1-217ENST00000475772 EPORP19235 508 aa9.62□□□□□ -0.87
CALD1-217ENST00000475772 GSTT1P30711 240 aa9.62□□□□□ -0.87
CALD1-217ENST00000475772 PIGAP37287 484 aa9.62□□□□□ -0.87
CALD1-217ENST00000475772 MYBPHQ13203 477 aa9.62□□□□□ -0.87
CALD1-217ENST00000475772 SLC10A1Q14973 349 aa9.62□□□□□ -0.87
CALD1-217ENST00000475772 POU4F3Q15319 338 aa9.62□□□□□ -0.87
CALD1-217ENST00000475772 PIGGQ5H8A4 983 aa9.62□□□□□ -0.87
CALD1-217ENST00000475772 EXOSC6Q5RKV6 272 aaKnown RBP9.62□□□□□ -0.87
CALD1-217ENST00000475772 NDUFAF5Q5TEU4 345 aa9.62□□□□□ -0.87
CALD1-217ENST00000475772 POMZP3Q6PJE2 187 aa9.62□□□□□ -0.87
CALD1-217ENST00000475772 ARSKQ6UWY0 536 aa9.62□□□□□ -0.87
CALD1-217ENST00000475772 B3GNT6Q6ZMB0 384 aa9.62□□□□□ -0.87
CALD1-217ENST00000475772 DGAT2L6Q6ZPD8 337 aa9.62□□□□□ -0.87
CALD1-217ENST00000475772 RTL4Q6ZR62 310 aa9.62□□□□□ -0.87
CALD1-217ENST00000475772 ZZZ3Q8IYH5 903 aa9.62□□□□□ -0.87
CALD1-217ENST00000475772 CLYBLQ8N0X4 340 aa9.62□□□□□ -0.87
CALD1-217ENST00000475772 MMP21Q8N119 569 aa9.62□□□□□ -0.87
CALD1-217ENST00000475772 FAM109AQ8N4B1 249 aa9.62□□□□□ -0.87
CALD1-217ENST00000475772 NKAPQ8N5F7 415 aaKnown RBP9.62□□□□□ -0.87
CALD1-217ENST00000475772 GOLM1Q8NBJ4 401 aa9.62□□□□□ -0.87
CALD1-217ENST00000475772 OR8K3Q8NH51 312 aa9.62□□□□□ -0.87
CALD1-217ENST00000475772 CCT6BQ92526 530 aa9.62□□□□□ -0.87
CALD1-217ENST00000475772 FAM46AQ96IP4 442 aaKnown RBP9.62□□□□□ -0.87
CALD1-217ENST00000475772 CAPZA3Q96KX2 299 aa9.62□□□□□ -0.87
CALD1-217ENST00000475772 F2RL3Q96RI0 385 aa9.62□□□□□ -0.87
CALD1-217ENST00000475772 SERINC2Q96SA4 455 aa9.62□□□□□ -0.87
CALD1-217ENST00000475772 MAPKAP1Q9BPZ7 522 aa9.62□□□□□ -0.87
CALD1-217ENST00000475772 NAT9Q9BTE0 207 aa9.62□□□□□ -0.87
CALD1-217ENST00000475772 REXO4Q9GZR2 422 aaKnown RBP9.62□□□□□ -0.87
CALD1-217ENST00000475772 PPANQ9NQ55 473 aaKnown RBP9.62□□□□□ -0.87
CALD1-217ENST00000475772 DLL4Q9NR61 685 aa9.62□□□□□ -0.87
CALD1-217ENST00000475772 TRMT1Q9NXH9 659 aaKnown RBP9.62□□□□□ -0.87
CALD1-217ENST00000475772 SPRR3Q9UBC9 169 aa9.62□□□□□ -0.87
CALD1-217ENST00000475772 CHMP2BQ9UQN3 213 aa9.62□□□□□ -0.87
CALD1-217ENST00000475772 CLCA3PQ9Y6N3 262 aa9.62□□□□□ -0.87
CALD1-217ENST00000475772 FAM95CA0A1B0GW59 222 aa9.61□□□□□ -0.87
CALD1-217ENST00000475772 ATP6AP2A0A1C7CYW4 349 aa9.61□□□□□ -0.87
CALD1-217ENST00000475772 PABPN1LA6NDY0 278 aaKnown RBP9.61□□□□□ -0.87
CALD1-217ENST00000475772 ANKDD1BA6NHY2 528 aa9.61□□□□□ -0.87
CALD1-217ENST00000475772 C17orf105B2RV13 164 aa9.61□□□□□ -0.87
CALD1-217ENST00000475772 ACOT7O00154 380 aa9.61□□□□□ -0.87
CALD1-217ENST00000475772 HRKO00198 91 aa9.61□□□□□ -0.87
CALD1-217ENST00000475772 PGRMC1O00264 195 aaKnown RBP9.61□□□□□ -0.87
CALD1-217ENST00000475772 DYRK3O43781 588 aa9.61□□□□□ -0.87
CALD1-217ENST00000475772 ATP6AP2O75787 350 aa9.61□□□□□ -0.87
CALD1-217ENST00000475772 IFNA16P05015 189 aa9.61□□□□□ -0.87
CALD1-217ENST00000475772 KLK2P20151 261 aa9.61□□□□□ -0.87
CALD1-217ENST00000475772 GGT5P36269 586 aa9.61□□□□□ -0.87
CALD1-217ENST00000475772 KCNC1P48547 511 aa9.61□□□□□ -0.87
CALD1-217ENST00000475772 HNMTP50135 292 aa9.61□□□□□ -0.87
CALD1-217ENST00000475772 MTTPP55157 894 aa9.61□□□□□ -0.87
CALD1-217ENST00000475772 ID2Q02363 134 aa9.61□□□□□ -0.87
CALD1-217ENST00000475772 FRG1Q14331 258 aaKnown RBP9.61□□□□□ -0.87
CALD1-217ENST00000475772 TGFBIQ15582 683 aa9.61□□□□□ -0.87
CALD1-217ENST00000475772 ZNF791Q3KP31 576 aaPredicted RBP9.61□□□□□ -0.87
CALD1-217ENST00000475772 GK5Q6ZS86 529 aa9.61□□□□□ -0.87
CALD1-217ENST00000475772 FAM47EQ6ZV65 393 aa9.61□□□□□ -0.87
CALD1-217ENST00000475772 SPATA6LQ8N4H0 392 aa9.61□□□□□ -0.87
CALD1-217ENST00000475772 NAXEQ8NCW5 288 aa9.61□□□□□ -0.87
CALD1-217ENST00000475772 TTLQ8NG68 377 aa9.61□□□□□ -0.87
CALD1-217ENST00000475772 GABPB2Q8TAK5 448 aaPredicted RBP9.61□□□□□ -0.87
CALD1-217ENST00000475772 SLC2A12Q8TD20 617 aa9.61□□□□□ -0.87
CALD1-217ENST00000475772 GRK7Q8WTQ7 553 aa9.61□□□□□ -0.87
CALD1-217ENST00000475772 DAZLQ92904 295 aaKnown RBP9.61□□□□□ -0.87
CALD1-217ENST00000475772 SLCO2A1Q92959 643 aa9.61□□□□□ -0.87
CALD1-217ENST00000475772 NINJ1Q92982 152 aa9.61□□□□□ -0.87
CALD1-217ENST00000475772 WDR34Q96EX3 536 aa9.61□□□□□ -0.87
CALD1-217ENST00000475772 CFAP36Q96G28 342 aa9.61□□□□□ -0.87
CALD1-217ENST00000475772 SGCZQ96LD1 299 aa9.61□□□□□ -0.87
CALD1-217ENST00000475772 OSBPL9Q96SU4 736 aa9.61□□□□□ -0.87
CALD1-217ENST00000475772 EGFL8Q99944 293 aa9.61□□□□□ -0.87
CALD1-217ENST00000475772 GPATCH1Q9BRR8 931 aaKnown RBP9.61□□□□□ -0.87
CALD1-217ENST00000475772 OR8D2Q9GZM6 311 aa9.61□□□□□ -0.87
CALD1-217ENST00000475772 DDX47Q9H0S4 455 aaKnown RBP9.61□□□□□ -0.87
CALD1-217ENST00000475772 SMYD2Q9NRG4 433 aa9.61□□□□□ -0.87
CALD1-217ENST00000475772 RASSF1Q9NS23 344 aa9.61□□□□□ -0.87
CALD1-217ENST00000475772 SACM1LQ9NTJ5 587 aa9.61□□□□□ -0.87
CALD1-217ENST00000475772 MOCS1Q9NZB8 636 aa9.61□□□□□ -0.87
CALD1-217ENST00000475772 ST6GALNAC2Q9UJ37 374 aa9.61□□□□□ -0.87
CALD1-217ENST00000475772 ACAD8Q9UKU7 415 aa9.61□□□□□ -0.87
CALD1-217ENST00000475772 RPH3AQ9Y2J0 694 aaPredicted RBP9.61□□□□□ -0.87
CALD1-217ENST00000475772 MED12LQ86YW9 2145 aa9.61□□□□□ -0.87
CALD1-217ENST00000475772 ARID1AO14497 2285 aa9.6□□□□□ -0.87
CALD1-217ENST00000475772 TRGV5A0A0B4J1U4 118 aa9.6□□□□□ -0.87
CALD1-217ENST00000475772 NCF1BA6NI72 391 aaPredicted RBP9.6□□□□□ -0.87
CALD1-217ENST00000475772 WASHC1A8K0Z3 465 aa9.6□□□□□ -0.87
CALD1-217ENST00000475772 NCF1CA8MVU1 366 aaPredicted RBP9.6□□□□□ -0.87
CALD1-217ENST00000475772 RTCAO00442 366 aaKnown RBP9.6□□□□□ -0.87
CALD1-217ENST00000475772 SYT5O00445 386 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms