RNA–Protein interactions for RNA: ENST00000475218.2

UPF3A-204, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 1 (best)

Gene UPF3A, Length 1,791 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-204ENST00000475218 TXLNGYQ9BZA5 131 aa13.05□□□□□ -0.32
UPF3A-204ENST00000475218 TSPYL1Q9H0U9 437 aa13.05□□□□□ -0.32
UPF3A-204ENST00000475218 EPB41L4BQ9H329 900 aa13.05□□□□□ -0.32
UPF3A-204ENST00000475218 SH2D2AQ9NP31 389 aa13.05□□□□□ -0.32
UPF3A-204ENST00000475218 FARSBQ9NSD9 589 aaKnown RBP13.05□□□□□ -0.32
UPF3A-204ENST00000475218 HPF1Q9NWY4 346 aa13.05□□□□□ -0.32
UPF3A-204ENST00000475218 TEX10Q9NXF1 929 aaPredicted RBP13.05□□□□□ -0.32
UPF3A-204ENST00000475218 MS4A12Q9NXJ0 267 aa13.05□□□□□ -0.32
UPF3A-204ENST00000475218 PHF11Q9UIL8 331 aa13.05□□□□□ -0.32
UPF3A-204ENST00000475218 ZNF225Q9UK10 706 aa13.05□□□□□ -0.32
UPF3A-204ENST00000475218 NFU1Q9UMS0 254 aa13.05□□□□□ -0.32
UPF3A-204ENST00000475218 SPACA6W5XKT8 324 aa13.05□□□□□ -0.32
UPF3A-204ENST00000475218 CACNA1CQ13936 2221 aa13.05□□□□□ -0.32
UPF3A-204ENST00000475218 C19orf84I3L1E1 186 aa13.04□□□□□ -0.32
UPF3A-204ENST00000475218 TFECO14948 347 aaPredicted RBP13.04□□□□□ -0.32
UPF3A-204ENST00000475218 PGRMC2O15173 223 aa13.04□□□□□ -0.32
UPF3A-204ENST00000475218 GLSO94925 669 aaPredicted RBP13.04□□□□□ -0.32
UPF3A-204ENST00000475218 MLYCDO95822 493 aa13.04□□□□□ -0.32
UPF3A-204ENST00000475218 TUBB4AP04350 444 aa13.04□□□□□ -0.32
UPF3A-204ENST00000475218 FAM153BP0C7A2 387 aa13.04□□□□□ -0.32
UPF3A-204ENST00000475218 CCL3P10147 92 aa13.04□□□□□ -0.32
UPF3A-204ENST00000475218 COL6A2P12110 1019 aa13.04□□□□□ -0.32
UPF3A-204ENST00000475218 FOXO1Q12778 655 aa13.04□□□□□ -0.32
UPF3A-204ENST00000475218 ZNF630Q2M218 657 aaPredicted RBP13.04□□□□□ -0.32
UPF3A-204ENST00000475218 ZNF791Q3KP31 576 aaPredicted RBP13.04□□□□□ -0.32
UPF3A-204ENST00000475218 FAM153CQ494X1 144 aa13.04□□□□□ -0.32
UPF3A-204ENST00000475218 PIGGQ5H8A4 983 aa13.04□□□□□ -0.32
UPF3A-204ENST00000475218 LETMD1Q6P1Q0 360 aa13.04□□□□□ -0.32
UPF3A-204ENST00000475218 MARVELD2Q8N4S9 558 aa13.04□□□□□ -0.32
UPF3A-204ENST00000475218 MNS1Q8NEH6 495 aa13.04□□□□□ -0.32
UPF3A-204ENST00000475218 ZNF483Q8TF39 744 aaPredicted RBP13.04□□□□□ -0.32
UPF3A-204ENST00000475218 DGAT2Q96PD7 388 aa13.04□□□□□ -0.32
UPF3A-204ENST00000475218 TIMMDC1Q9NPL8 285 aa13.04□□□□□ -0.32
UPF3A-204ENST00000475218 ERVK-11Q9UQG0 969 aa13.04□□□□□ -0.32
UPF3A-204ENST00000475218 NCKAP5O14513 1909 aa13.04□□□□□ -0.32
UPF3A-204ENST00000475218 A0A087WUV0 522 aaPredicted RBP13.04□□□□□ -0.32
UPF3A-204ENST00000475218 A8MT66 165 aa13.04□□□□□ -0.32
UPF3A-204ENST00000475218 GPR75O95800 540 aa13.04□□□□□ -0.32
UPF3A-204ENST00000475218 ALOX15P16050 662 aaPredicted RBP13.04□□□□□ -0.32
UPF3A-204ENST00000475218 ABOP16442 354 aa13.04□□□□□ -0.32
UPF3A-204ENST00000475218 TSPAN8P19075 237 aa13.04□□□□□ -0.32
UPF3A-204ENST00000475218 ASPHQ12797 758 aa13.04□□□□□ -0.32
UPF3A-204ENST00000475218 MPEG1Q2M385 716 aa13.04□□□□□ -0.32
UPF3A-204ENST00000475218 SPRED3Q2MJR0 410 aa13.04□□□□□ -0.32
UPF3A-204ENST00000475218 EMC4Q5J8M3 183 aa13.04□□□□□ -0.32
UPF3A-204ENST00000475218 FRG2Q64ET8 278 aa13.04□□□□□ -0.32
UPF3A-204ENST00000475218 MTFR2Q6P444 385 aa13.04□□□□□ -0.32
UPF3A-204ENST00000475218 ST13P4Q8IZP2 240 aaPredicted RBP13.04□□□□□ -0.32
UPF3A-204ENST00000475218 OR4F6Q8NGB9 312 aa13.04□□□□□ -0.32
UPF3A-204ENST00000475218 FAM57AQ8TBR7 257 aa13.04□□□□□ -0.32
UPF3A-204ENST00000475218 REPS1Q96D71 796 aa13.04□□□□□ -0.32
UPF3A-204ENST00000475218 FRG2BQ96QU4 278 aa13.04□□□□□ -0.32
UPF3A-204ENST00000475218 C1QTNF3Q9BXJ4 246 aa13.04□□□□□ -0.32
UPF3A-204ENST00000475218 MRPL46Q9H2W6 279 aaKnown RBP13.04□□□□□ -0.32
UPF3A-204ENST00000475218 ZDHHC11Q9H8X9 412 aa13.04□□□□□ -0.32
UPF3A-204ENST00000475218 PROK2Q9HC23 129 aa13.04□□□□□ -0.32
UPF3A-204ENST00000475218 SEMA4BQ9NPR2 832 aaPredicted RBP13.04□□□□□ -0.32
UPF3A-204ENST00000475218 HNRNPRO43390 633 aaKnown RBP13.03□□□□□ -0.32
UPF3A-204ENST00000475218 KRT38O76015 456 aa13.03□□□□□ -0.32
UPF3A-204ENST00000475218 PDE9AO76083 593 aa13.03□□□□□ -0.32
UPF3A-204ENST00000475218 SEMA3DO95025 777 aa13.03□□□□□ -0.32
UPF3A-204ENST00000475218 ABHD2P08910 425 aa13.03□□□□□ -0.32
UPF3A-204ENST00000475218 NR2F6P10588 404 aa13.03□□□□□ -0.32
UPF3A-204ENST00000475218 CNTFP26441 200 aa13.03□□□□□ -0.32
UPF3A-204ENST00000475218 HTR1EP28566 365 aa13.03□□□□□ -0.32
UPF3A-204ENST00000475218 CASP6P55212 293 aa13.03□□□□□ -0.32
UPF3A-204ENST00000475218 CDH13P55290 713 aa13.03□□□□□ -0.32
UPF3A-204ENST00000475218 SLC37A1P57057 533 aa13.03□□□□□ -0.32
UPF3A-204ENST00000475218 HERVK_113P63132 956 aa13.03□□□□□ -0.32
UPF3A-204ENST00000475218 ERVK-8P63133 956 aa13.03□□□□□ -0.32
UPF3A-204ENST00000475218 PLIN5Q00G26 463 aa13.03□□□□□ -0.32
UPF3A-204ENST00000475218 TSNAXIP1Q2TAA8 658 aa13.03□□□□□ -0.32
UPF3A-204ENST00000475218 GGTA1PQ4G0N0 100 aa13.03□□□□□ -0.32
UPF3A-204ENST00000475218 XKRXQ6PP77 449 aa13.03□□□□□ -0.32
UPF3A-204ENST00000475218 RTL4Q6ZR62 310 aa13.03□□□□□ -0.32
UPF3A-204ENST00000475218 MMP21Q8N119 569 aa13.03□□□□□ -0.32
UPF3A-204ENST00000475218 RPRMLQ8N4K4 120 aa13.03□□□□□ -0.32
UPF3A-204ENST00000475218 NUBPLQ8TB37 319 aa13.03□□□□□ -0.32
UPF3A-204ENST00000475218 MRPL57Q9BQC6 102 aaKnown RBP13.03□□□□□ -0.32
UPF3A-204ENST00000475218 ERVK-6Q9BXR3 956 aa13.03□□□□□ -0.32
UPF3A-204ENST00000475218 MRPL1Q9BYD6 325 aaKnown RBP13.03□□□□□ -0.32
UPF3A-204ENST00000475218 TTTY12Q9BZ98 90 aa13.03□□□□□ -0.32
UPF3A-204ENST00000475218 LYARQ9NX58 379 aaKnown RBP13.03□□□□□ -0.32
UPF3A-204ENST00000475218 TMEM216Q9P0N5 145 aa13.03□□□□□ -0.32
UPF3A-204ENST00000475218 ERVK-19Q9WJR5 959 aa13.03□□□□□ -0.32
UPF3A-204ENST00000475218 LIPGQ9Y5X9 500 aa13.03□□□□□ -0.32
UPF3A-204ENST00000475218 DNAJC13O75165 2243 aa13.03□□□□□ -0.32
UPF3A-204ENST00000475218 PKDREJQ9NTG1 2253 aa13.03□□□□□ -0.32
UPF3A-204ENST00000475218 FAM166BA8MTA8 275 aa13.02□□□□□ -0.32
UPF3A-204ENST00000475218 E9PLN8 166 aa13.02□□□□□ -0.32
UPF3A-204ENST00000475218 RIPK2O43353 540 aa13.02□□□□□ -0.32
UPF3A-204ENST00000475218 CDC40O60508 579 aaKnown RBP eCLIP13.02□□□□□ -0.32
UPF3A-204ENST00000475218 SNRPAP09012 282 aaKnown RBP13.02□□□□□ -0.32
UPF3A-204ENST00000475218 AGAP20933 346 aa13.02□□□□□ -0.32
UPF3A-204ENST00000475218 PTGS2P35354 604 aa13.02□□□□□ -0.32
UPF3A-204ENST00000475218 SOX18P35713 384 aa13.02□□□□□ -0.32
UPF3A-204ENST00000475218 BUD31P41223 144 aaPredicted RBP13.02□□□□□ -0.32
UPF3A-204ENST00000475218 CCNG1P51959 295 aa13.02□□□□□ -0.32
UPF3A-204ENST00000475218 GALNT1Q10472 559 aaPredicted RBP13.02□□□□□ -0.32
UPF3A-204ENST00000475218 TIFABQ6ZNK6 161 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms