RNA–Protein interactions for RNA: ENST00000474691.1

EPCAM-205, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 5

Gene EPCAM, Length 714 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-205ENST00000474691 DIO2Q92813 273 aa12.72□□□□□ -0.37
EPCAM-205ENST00000474691 TANKQ92844 425 aa12.72□□□□□ -0.37
EPCAM-205ENST00000474691 ESAMQ96AP7 390 aa12.72□□□□□ -0.37
EPCAM-205ENST00000474691 PPWD1Q96BP3 646 aaKnown RBP12.72□□□□□ -0.37
EPCAM-205ENST00000474691 CMTM7Q96FZ5 175 aa12.72□□□□□ -0.37
EPCAM-205ENST00000474691 DERL2Q9GZP9 239 aa12.72□□□□□ -0.37
EPCAM-205ENST00000474691 RHOJQ9H4E5 214 aa12.72□□□□□ -0.37
EPCAM-205ENST00000474691 GSX1Q9H4S2 264 aaPredicted RBP12.72□□□□□ -0.37
EPCAM-205ENST00000474691 RPF2Q9H7B2 306 aaKnown RBP12.72□□□□□ -0.37
EPCAM-205ENST00000474691 ZNF703Q9H7S9 590 aaPredicted RBP12.72□□□□□ -0.37
EPCAM-205ENST00000474691 WDR41Q9HAD4 459 aa12.72□□□□□ -0.37
EPCAM-205ENST00000474691 NEUROD4Q9HD90 331 aa12.72□□□□□ -0.37
EPCAM-205ENST00000474691 ACKR4Q9NPB9 350 aa12.72□□□□□ -0.37
EPCAM-205ENST00000474691 DMRT3Q9NQL9 472 aa12.72□□□□□ -0.37
EPCAM-205ENST00000474691 ZNF629Q9UEG4 869 aaPredicted RBP12.72□□□□□ -0.37
EPCAM-205ENST00000474691 PHF11Q9UIL8 331 aa12.72□□□□□ -0.37
EPCAM-205ENST00000474691 CAMK2AQ9UQM7 478 aa12.72□□□□□ -0.37
EPCAM-205ENST00000474691 ANGPTL3Q9Y5C1 460 aa12.72□□□□□ -0.37
EPCAM-205ENST00000474691 DCHS2Q6V1P9 2916 aa12.72□□□□□ -0.37
EPCAM-205ENST00000474691 SPG11Q96JI7 2443 aa12.72□□□□□ -0.37
EPCAM-205ENST00000474691 PRRC2AP48634 2157 aaKnown RBP12.71□□□□□ -0.37
EPCAM-205ENST00000474691 SETD2Q9BYW2 2564 aaPredicted RBP12.71□□□□□ -0.37
EPCAM-205ENST00000474691 EEF1E1-BLOC1S5C9J1V9 151 aa12.71□□□□□ -0.37
EPCAM-205ENST00000474691 SAP18O00422 153 aaKnown RBP12.71□□□□□ -0.37
EPCAM-205ENST00000474691 RTCAO00442 366 aaKnown RBP12.71□□□□□ -0.37
EPCAM-205ENST00000474691 CES2O00748 559 aa12.71□□□□□ -0.37
EPCAM-205ENST00000474691 EEF1E1O43324 174 aaKnown RBP12.71□□□□□ -0.37
EPCAM-205ENST00000474691 EPPINO95925 133 aa12.71□□□□□ -0.37
EPCAM-205ENST00000474691 CCDC166P0CW27 439 aa12.71□□□□□ -0.37
EPCAM-205ENST00000474691 ALOX15P16050 662 aaPredicted RBP12.71□□□□□ -0.37
EPCAM-205ENST00000474691 STMN1P16949 149 aa12.71□□□□□ -0.37
EPCAM-205ENST00000474691 HOXB4P17483 251 aaPredicted RBP12.71□□□□□ -0.37
EPCAM-205ENST00000474691 KRT15P19012 456 aa12.71□□□□□ -0.37
EPCAM-205ENST00000474691 HIST1H1TP22492 207 aaPredicted RBP12.71□□□□□ -0.37
EPCAM-205ENST00000474691 SERPINB1P30740 379 aa12.71□□□□□ -0.37
EPCAM-205ENST00000474691 TMED10P49755 219 aaKnown RBP12.71□□□□□ -0.37
EPCAM-205ENST00000474691 NRG3P56975 720 aa12.71□□□□□ -0.37
EPCAM-205ENST00000474691 DUSP8Q13202 625 aa12.71□□□□□ -0.37
EPCAM-205ENST00000474691 DDX39BQ13838 428 aaKnown RBP12.71□□□□□ -0.37
EPCAM-205ENST00000474691 ZNF267Q14586 743 aaPredicted RBP12.71□□□□□ -0.37
EPCAM-205ENST00000474691 ZNF791Q3KP31 576 aaPredicted RBP12.71□□□□□ -0.37
EPCAM-205ENST00000474691 CDKL4Q5MAI5 379 aa12.71□□□□□ -0.37
EPCAM-205ENST00000474691 STEAP4Q687X5 459 aa12.71□□□□□ -0.37
EPCAM-205ENST00000474691 OR4C11Q6IEV9 310 aa12.71□□□□□ -0.37
EPCAM-205ENST00000474691 CAPN12Q6ZSI9 719 aa12.71□□□□□ -0.37
EPCAM-205ENST00000474691 SYDE1Q6ZW31 735 aaPredicted RBP12.71□□□□□ -0.37
EPCAM-205ENST00000474691 BIVMQ86UB2 503 aa12.71□□□□□ -0.37
EPCAM-205ENST00000474691 PACS2Q86VP3 889 aa12.71□□□□□ -0.37
EPCAM-205ENST00000474691 C9orf40Q8IXQ3 194 aa12.71□□□□□ -0.37
EPCAM-205ENST00000474691 KLHL7Q8IXQ5 586 aa12.71□□□□□ -0.37
EPCAM-205ENST00000474691 SPATA6LQ8N4H0 392 aa12.71□□□□□ -0.37
EPCAM-205ENST00000474691 ANKRD9Q96BM1 317 aaPredicted RBP12.71□□□□□ -0.37
EPCAM-205ENST00000474691 TRIB1Q96RU8 372 aa12.71□□□□□ -0.37
EPCAM-205ENST00000474691 TMEM79Q9BSE2 394 aa12.71□□□□□ -0.37
EPCAM-205ENST00000474691 ADGRE2Q9UHX3 823 aa12.71□□□□□ -0.37
EPCAM-205ENST00000474691 ZNF490Q9ULM2 529 aaPredicted RBP12.71□□□□□ -0.37
EPCAM-205ENST00000474691 PSAT1Q9Y617 370 aa12.71□□□□□ -0.37
EPCAM-205ENST00000474691 CASKO14936 926 aa12.7□□□□□ -0.38
EPCAM-205ENST00000474691 FGF17O60258 216 aa12.7□□□□□ -0.38
EPCAM-205ENST00000474691 ZNF354AO60765 605 aaPredicted RBP12.7□□□□□ -0.38
EPCAM-205ENST00000474691 RFPL3SP0C7P2 107 aa12.7□□□□□ -0.38
EPCAM-205ENST00000474691 EPXP11678 715 aa12.7□□□□□ -0.38
EPCAM-205ENST00000474691 OPRM1P35372 400 aa12.7□□□□□ -0.38
EPCAM-205ENST00000474691 TIMP3P35625 211 aa12.7□□□□□ -0.38
EPCAM-205ENST00000474691 GGT5P36269 586 aa12.7□□□□□ -0.38
EPCAM-205ENST00000474691 HERVK_113P63132 956 aa12.7□□□□□ -0.38
EPCAM-205ENST00000474691 ERVK-8P63133 956 aa12.7□□□□□ -0.38
EPCAM-205ENST00000474691 ADAM8P78325 824 aa12.7□□□□□ -0.38
EPCAM-205ENST00000474691 DR1Q01658 176 aa12.7□□□□□ -0.38
EPCAM-205ENST00000474691 RCAN2Q14206 197 aa12.7□□□□□ -0.38
EPCAM-205ENST00000474691 FRG1Q14331 258 aaKnown RBP12.7□□□□□ -0.38
EPCAM-205ENST00000474691 DEFB113Q30KQ7 82 aa12.7□□□□□ -0.38
EPCAM-205ENST00000474691 ADNP2Q6IQ32 1131 aa12.7□□□□□ -0.38
EPCAM-205ENST00000474691 PAMR1Q6UXH9 720 aa12.7□□□□□ -0.38
EPCAM-205ENST00000474691 ZNF793Q6ZN11 406 aa12.7□□□□□ -0.38
EPCAM-205ENST00000474691 RAPH1Q70E73 1250 aa12.7□□□□□ -0.38
EPCAM-205ENST00000474691 LRRC70Q7Z2Q7 622 aa12.7□□□□□ -0.38
EPCAM-205ENST00000474691 VN1R5Q7Z5H4 357 aa12.7□□□□□ -0.38
EPCAM-205ENST00000474691 GPR180Q86V85 440 aa12.7□□□□□ -0.38
EPCAM-205ENST00000474691 LRRC25Q8N386 305 aaPredicted RBP12.7□□□□□ -0.38
EPCAM-205ENST00000474691 BBOF1Q8ND07 529 aa12.7□□□□□ -0.38
EPCAM-205ENST00000474691 TNIP2Q8NFZ5 429 aa12.7□□□□□ -0.38
EPCAM-205ENST00000474691 OR10G3Q8NGC4 313 aa12.7□□□□□ -0.38
EPCAM-205ENST00000474691 RIT1Q92963 219 aa12.7□□□□□ -0.38
EPCAM-205ENST00000474691 RGMAQ96B86 450 aa12.7□□□□□ -0.38
EPCAM-205ENST00000474691 FBXL20Q96IG2 436 aa12.7□□□□□ -0.38
EPCAM-205ENST00000474691 ERVK-6Q9BXR3 956 aa12.7□□□□□ -0.38
EPCAM-205ENST00000474691 MS4A8Q9BY19 250 aa12.7□□□□□ -0.38
EPCAM-205ENST00000474691 EPB41L4BQ9H329 900 aa12.7□□□□□ -0.38
EPCAM-205ENST00000474691 OPTCQ9UBM4 332 aa12.7□□□□□ -0.38
EPCAM-205ENST00000474691 CBLCQ9ULV8 474 aa12.7□□□□□ -0.38
EPCAM-205ENST00000474691 ERVK-19Q9WJR5 959 aa12.7□□□□□ -0.38
EPCAM-205ENST00000474691 TEX264Q9Y6I9 313 aa12.7□□□□□ -0.38
EPCAM-205ENST00000474691 C2orf92A0A1B0GVN3 265 aa12.69□□□□□ -0.38
EPCAM-205ENST00000474691 OR6C76A6NM76 312 aa12.69□□□□□ -0.38
EPCAM-205ENST00000474691 SUPT3HB4E1H0 165 aa12.69□□□□□ -0.38
EPCAM-205ENST00000474691 TAPBPO15533 448 aa12.69□□□□□ -0.38
EPCAM-205ENST00000474691 ERN1O75460 977 aaKnown RBP12.69□□□□□ -0.38
EPCAM-205ENST00000474691 SUPT3HO75486 399 aa12.69□□□□□ -0.38
EPCAM-205ENST00000474691 SNX4O95219 450 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms