RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 A0A088AWK7 358 aa6.54□□□□□ -1.36
LIMD1-204ENST00000474665 TCRBV16S1A1N1A0A5B0 115 aa6.54□□□□□ -1.36
LIMD1-204ENST00000474665 CDC14CA4D256 554 aa6.54□□□□□ -1.36
LIMD1-204ENST00000474665 ZNF891A8MT65 544 aaPredicted RBP6.54□□□□□ -1.36
LIMD1-204ENST00000474665 SLC28A1O00337 649 aa6.54□□□□□ -1.36
LIMD1-204ENST00000474665 ANKRD28O15084 1053 aa6.54□□□□□ -1.36
LIMD1-204ENST00000474665 RGS14O43566 566 aa6.54□□□□□ -1.36
LIMD1-204ENST00000474665 PCDH7O60245 1069 aa6.54□□□□□ -1.36
LIMD1-204ENST00000474665 PRMT3O60678 531 aa6.54□□□□□ -1.36
LIMD1-204ENST00000474665 EDF1O60869 148 aaKnown RBP6.54□□□□□ -1.36
LIMD1-204ENST00000474665 CTNSO60931 367 aa6.54□□□□□ -1.36
LIMD1-204ENST00000474665 SEC22BO75396 215 aa6.54□□□□□ -1.36
LIMD1-204ENST00000474665 DNAJB5O75953 348 aa6.54□□□□□ -1.36
LIMD1-204ENST00000474665 CHEK2O96017 543 aa6.54□□□□□ -1.36
LIMD1-204ENST00000474665 CELA2AP08217 269 aa6.54□□□□□ -1.36
LIMD1-204ENST00000474665 IL3P08700 152 aa6.54□□□□□ -1.36
LIMD1-204ENST00000474665 ANXA4P09525 319 aaPredicted RBP6.54□□□□□ -1.36
LIMD1-204ENST00000474665 ALDOCP09972 364 aaKnown RBP6.54□□□□□ -1.36
LIMD1-204ENST00000474665 CD1EP15812 388 aa6.54□□□□□ -1.36
LIMD1-204ENST00000474665 ALOX15P16050 662 aaPredicted RBP6.54□□□□□ -1.36
LIMD1-204ENST00000474665 ZNF10P21506 573 aaPredicted RBP6.54□□□□□ -1.36
LIMD1-204ENST00000474665 CPN2P22792 545 aa6.54□□□□□ -1.36
LIMD1-204ENST00000474665 EPHA3P29320 983 aa6.54□□□□□ -1.36
LIMD1-204ENST00000474665 GPR143P51810 404 aa6.54□□□□□ -1.36
LIMD1-204ENST00000474665 MAPK12P53778 367 aa6.54□□□□□ -1.36
LIMD1-204ENST00000474665 POLE2P56282 527 aa6.54□□□□□ -1.36
LIMD1-204ENST00000474665 HSD17B7P56937 341 aa6.54□□□□□ -1.36
LIMD1-204ENST00000474665 TAS2R50P59544 299 aa6.54□□□□□ -1.36
LIMD1-204ENST00000474665 TRA2BP62995 288 aaKnown RBP6.54□□□□□ -1.36
LIMD1-204ENST00000474665 RPL38P63173 70 aaKnown RBP6.54□□□□□ -1.36
LIMD1-204ENST00000474665 SKP1P63208 163 aa6.54□□□□□ -1.36
LIMD1-204ENST00000474665 CHAF1BQ13112 559 aa6.54□□□□□ -1.36
LIMD1-204ENST00000474665 NR6A1Q15406 480 aa6.54□□□□□ -1.36
LIMD1-204ENST00000474665 NSDHLQ15738 373 aa6.54□□□□□ -1.36
LIMD1-204ENST00000474665 MPEG1Q2M385 716 aa6.54□□□□□ -1.36
LIMD1-204ENST00000474665 GALNTL6Q49A17 601 aa6.54□□□□□ -1.36
LIMD1-204ENST00000474665 MINDY4Q4G0A6 757 aa6.54□□□□□ -1.36
LIMD1-204ENST00000474665 SPIN4Q56A73 249 aa6.54□□□□□ -1.36
LIMD1-204ENST00000474665 NDUFAF5Q5TEU4 345 aa6.54□□□□□ -1.36
LIMD1-204ENST00000474665 CPZQ66K79 652 aa6.54□□□□□ -1.36
LIMD1-204ENST00000474665 FAM180BQ6P0A1 224 aa6.54□□□□□ -1.36
LIMD1-204ENST00000474665 CYP20A1Q6UW02 462 aa6.54□□□□□ -1.36
LIMD1-204ENST00000474665 EPGNQ6UW88 154 aa6.54□□□□□ -1.36
LIMD1-204ENST00000474665 PAGE2Q7Z2X7 111 aa6.54□□□□□ -1.36
LIMD1-204ENST00000474665 ANKRD37Q7Z713 158 aa6.54□□□□□ -1.36
LIMD1-204ENST00000474665 ZNF595Q8IYB9 648 aa6.54□□□□□ -1.36
LIMD1-204ENST00000474665 EFCAB3Q8N7B9 438 aa6.54□□□□□ -1.36
LIMD1-204ENST00000474665 NFAM1Q8NET5 270 aaPredicted RBP6.54□□□□□ -1.36
LIMD1-204ENST00000474665 CLHC1Q8NHS4 586 aa6.54□□□□□ -1.36
LIMD1-204ENST00000474665 FAM76AQ8TAV0 307 aa6.54□□□□□ -1.36
LIMD1-204ENST00000474665 DNAJB14Q8TBM8 379 aa6.54□□□□□ -1.36
LIMD1-204ENST00000474665 PIWIL2Q8TC59 973 aaKnown RBP6.54□□□□□ -1.36
LIMD1-204ENST00000474665 DYDC1Q8WWB3 177 aa6.54□□□□□ -1.36
LIMD1-204ENST00000474665 TUBGCP3Q96CW5 907 aa6.54□□□□□ -1.36
LIMD1-204ENST00000474665 METTL2AQ96IZ6 378 aaKnown RBP6.54□□□□□ -1.36
LIMD1-204ENST00000474665 MAELQ96JY0 434 aaKnown RBP6.54□□□□□ -1.36
LIMD1-204ENST00000474665 IMMP1LQ96LU5 166 aa6.54□□□□□ -1.36
LIMD1-204ENST00000474665 ZNF681Q96N22 645 aa6.54□□□□□ -1.36
LIMD1-204ENST00000474665 PTCHD1Q96NR3 888 aa6.54□□□□□ -1.36
LIMD1-204ENST00000474665 EBF4Q9BQW3 602 aa6.54□□□□□ -1.36
LIMD1-204ENST00000474665 CENPKQ9BS16 269 aa6.54□□□□□ -1.36
LIMD1-204ENST00000474665 C1orf50Q9BV19 199 aa6.54□□□□□ -1.36
LIMD1-204ENST00000474665 TRIM55Q9BYV6 548 aa6.54□□□□□ -1.36
LIMD1-204ENST00000474665 RPF2Q9H7B2 306 aaKnown RBP6.54□□□□□ -1.36
LIMD1-204ENST00000474665 MYNNQ9NPC7 610 aa6.54□□□□□ -1.36
LIMD1-204ENST00000474665 PRDM9Q9NQV7 894 aa6.54□□□□□ -1.36
LIMD1-204ENST00000474665 PRTFDC1Q9NRG1 225 aa6.54□□□□□ -1.36
LIMD1-204ENST00000474665 SEMA3GQ9NS98 782 aa6.54□□□□□ -1.36
LIMD1-204ENST00000474665 NMRK1Q9NWW6 199 aa6.54□□□□□ -1.36
LIMD1-204ENST00000474665 LYARQ9NX58 379 aaKnown RBP6.54□□□□□ -1.36
LIMD1-204ENST00000474665 P4HTMQ9NXG6 502 aa6.54□□□□□ -1.36
LIMD1-204ENST00000474665 FBXL4Q9UKA2 621 aa6.54□□□□□ -1.36
LIMD1-204ENST00000474665 PADI2Q9Y2J8 665 aa6.54□□□□□ -1.36
LIMD1-204ENST00000474665 PCDHA9Q9Y5H5 950 aa6.54□□□□□ -1.36
LIMD1-204ENST00000474665 USH1CQ9Y6N9 552 aa6.54□□□□□ -1.36
LIMD1-204ENST00000474665 MED12Q93074 2177 aa6.54□□□□□ -1.36
LIMD1-204ENST00000474665 MTORP42345 2549 aa6.53□□□□□ -1.36
LIMD1-204ENST00000474665 MED13LQ71F56 2210 aa6.53□□□□□ -1.36
LIMD1-204ENST00000474665 ZNF407Q9C0G0 2248 aa6.53□□□□□ -1.36
LIMD1-204ENST00000474665 IGHV1-45A0A0A0MS14 117 aa6.53□□□□□ -1.36
LIMD1-204ENST00000474665 GOLGA8QA0A0J9YX86 632 aa6.53□□□□□ -1.36
LIMD1-204ENST00000474665 GNG14A0A1W2PPG7 69 aa6.53□□□□□ -1.36
LIMD1-204ENST00000474665 GOLGA8OA6NCC3 632 aa6.53□□□□□ -1.36
LIMD1-204ENST00000474665 GOLGA8NF8WBI6 632 aa6.53□□□□□ -1.36
LIMD1-204ENST00000474665 HRKO00198 91 aa6.53□□□□□ -1.36
LIMD1-204ENST00000474665 PSMD12O00232 456 aaPredicted RBP6.53□□□□□ -1.36
LIMD1-204ENST00000474665 VPS4BO75351 444 aa6.53□□□□□ -1.36
LIMD1-204ENST00000474665 GPR75O95800 540 aa6.53□□□□□ -1.36
LIMD1-204ENST00000474665 DDAH2O95865 285 aa6.53□□□□□ -1.36
LIMD1-204ENST00000474665 HEXBP07686 556 aa6.53□□□□□ -1.36
LIMD1-204ENST00000474665 CYC1P08574 325 aa6.53□□□□□ -1.36
LIMD1-204ENST00000474665 CD63P08962 238 aa6.53□□□□□ -1.36
LIMD1-204ENST00000474665 C8orf89P0DMQ9 161 aa6.53□□□□□ -1.36
LIMD1-204ENST00000474665 NR2F6P10588 404 aa6.53□□□□□ -1.36
LIMD1-204ENST00000474665 JAK1P23458 1154 aa6.53□□□□□ -1.36
LIMD1-204ENST00000474665 PTGER1P34995 402 aa6.53□□□□□ -1.36
LIMD1-204ENST00000474665 IDH3AP50213 366 aa6.53□□□□□ -1.36
LIMD1-204ENST00000474665 FOLH1Q04609 750 aa6.53□□□□□ -1.36
LIMD1-204ENST00000474665 EMX2Q04743 252 aa6.53□□□□□ -1.36
LIMD1-204ENST00000474665 EEF1A2Q05639 463 aaKnown RBP6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms