RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 RASL10BQ96S79 203 aa10.38□□□□□ -0.75
CKS1B-206ENST00000474215 PELOQ9BRX2 385 aaKnown RBP10.38□□□□□ -0.75
CKS1B-206ENST00000474215 TSPAN10Q9H1Z9 355 aaPredicted RBP10.38□□□□□ -0.75
CKS1B-206ENST00000474215 PPCSQ9HAB8 311 aa10.38□□□□□ -0.75
CKS1B-206ENST00000474215 BRF2Q9HAW0 419 aa10.38□□□□□ -0.75
CKS1B-206ENST00000474215 TIMMDC1Q9NPL8 285 aa10.38□□□□□ -0.75
CKS1B-206ENST00000474215 NMRK1Q9NWW6 199 aa10.38□□□□□ -0.75
CKS1B-206ENST00000474215 TRPS1Q9UHF7 1281 aa10.38□□□□□ -0.75
CKS1B-206ENST00000474215 ZNF225Q9UK10 706 aa10.38□□□□□ -0.75
CKS1B-206ENST00000474215 NPIPA1Q9UND3 350 aa10.38□□□□□ -0.75
CKS1B-206ENST00000474215 SLC12A4Q9UP95 1085 aa10.38□□□□□ -0.75
CKS1B-206ENST00000474215 POLEQ07864 2286 aa10.37□□□□□ -0.75
CKS1B-206ENST00000474215 TRGV8A0A0C4DH27 118 aa10.37□□□□□ -0.75
CKS1B-206ENST00000474215 A8MVJ9 347 aa10.37□□□□□ -0.75
CKS1B-206ENST00000474215 FOXO6A8MYZ6 492 aa10.37□□□□□ -0.75
CKS1B-206ENST00000474215 HRKO00198 91 aa10.37□□□□□ -0.75
CKS1B-206ENST00000474215 MANBAO00462 879 aa10.37□□□□□ -0.75
CKS1B-206ENST00000474215 OR10H2O60403 315 aa10.37□□□□□ -0.75
CKS1B-206ENST00000474215 SLC19A2O60779 497 aa10.37□□□□□ -0.75
CKS1B-206ENST00000474215 GUCY1B2O75343 617 aa10.37□□□□□ -0.75
CKS1B-206ENST00000474215 OR6B1O95007 311 aa10.37□□□□□ -0.75
CKS1B-206ENST00000474215 CLDN1O95832 211 aa10.37□□□□□ -0.75
CKS1B-206ENST00000474215 KRT6AP02538 564 aa10.37□□□□□ -0.75
CKS1B-206ENST00000474215 KRT6BP04259 564 aa10.37□□□□□ -0.75
CKS1B-206ENST00000474215 SLC35E2P0CK97 266 aa10.37□□□□□ -0.75
CKS1B-206ENST00000474215 ZNF24P17028 368 aa10.37□□□□□ -0.75
CKS1B-206ENST00000474215 GALNSP34059 522 aa10.37□□□□□ -0.75
CKS1B-206ENST00000474215 SOX3P41225 446 aa10.37□□□□□ -0.75
CKS1B-206ENST00000474215 SLCO1A2P46721 670 aa10.37□□□□□ -0.75
CKS1B-206ENST00000474215 KRT6CP48668 564 aa10.37□□□□□ -0.75
CKS1B-206ENST00000474215 MEOX1P50221 254 aa10.37□□□□□ -0.75
CKS1B-206ENST00000474215 MAPK12P53778 367 aa10.37□□□□□ -0.75
CKS1B-206ENST00000474215 ZNF267Q14586 743 aaPredicted RBP10.37□□□□□ -0.75
CKS1B-206ENST00000474215 RASA2Q15283 850 aa10.37□□□□□ -0.75
CKS1B-206ENST00000474215 MPEG1Q2M385 716 aa10.37□□□□□ -0.75
CKS1B-206ENST00000474215 NDUFAF5Q5TEU4 345 aa10.37□□□□□ -0.75
CKS1B-206ENST00000474215 OR52E8Q6IFG1 317 aa10.37□□□□□ -0.75
CKS1B-206ENST00000474215 OPN5Q6U736 354 aa10.37□□□□□ -0.75
CKS1B-206ENST00000474215 SH2D5Q6ZV89 423 aa10.37□□□□□ -0.75
CKS1B-206ENST00000474215 GPRIN3Q6ZVF9 776 aa10.37□□□□□ -0.75
CKS1B-206ENST00000474215 MAMDC2Q7Z304 686 aaPredicted RBP10.37□□□□□ -0.75
CKS1B-206ENST00000474215 COMMD6Q7Z4G1 85 aa10.37□□□□□ -0.75
CKS1B-206ENST00000474215 TDRPQ86YL5 185 aa10.37□□□□□ -0.75
CKS1B-206ENST00000474215 CDYL2Q8N8U2 506 aa10.37□□□□□ -0.75
CKS1B-206ENST00000474215 ZFP62Q8NB50 900 aaPredicted RBP10.37□□□□□ -0.75
CKS1B-206ENST00000474215 METTL6Q8TCB7 284 aa10.37□□□□□ -0.75
CKS1B-206ENST00000474215 RIT1Q92963 219 aa10.37□□□□□ -0.75
CKS1B-206ENST00000474215 CCDC126Q96EE4 140 aa10.37□□□□□ -0.75
CKS1B-206ENST00000474215 ART5Q96L15 291 aa10.37□□□□□ -0.75
CKS1B-206ENST00000474215 ZNF382Q96SR6 550 aa10.37□□□□□ -0.75
CKS1B-206ENST00000474215 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.37□□□□□ -0.75
CKS1B-206ENST00000474215 HPF1Q9NWY4 346 aa10.37□□□□□ -0.75
CKS1B-206ENST00000474215 TEX10Q9NXF1 929 aaPredicted RBP10.37□□□□□ -0.75
CKS1B-206ENST00000474215 EMCNQ9ULC0 261 aa10.37□□□□□ -0.75
CKS1B-206ENST00000474215 STK38LQ9Y2H1 464 aa10.37□□□□□ -0.75
CKS1B-206ENST00000474215 HIVEP3Q5T1R4 2406 aa10.36□□□□□ -0.75
CKS1B-206ENST00000474215 G3V2L1 256 aa10.36□□□□□ -0.75
CKS1B-206ENST00000474215 CCL21O00585 134 aa10.36□□□□□ -0.75
CKS1B-206ENST00000474215 ZG16O60844 167 aa10.36□□□□□ -0.75
CKS1B-206ENST00000474215 GLRA3O75311 464 aa10.36□□□□□ -0.75
CKS1B-206ENST00000474215 ULK1O75385 1050 aa10.36□□□□□ -0.75
CKS1B-206ENST00000474215 HSD3B1P14060 373 aa10.36□□□□□ -0.75
CKS1B-206ENST00000474215 KRT15P19012 456 aa10.36□□□□□ -0.75
CKS1B-206ENST00000474215 HSD3B2P26439 372 aa10.36□□□□□ -0.75
CKS1B-206ENST00000474215 PIK3R1P27986 724 aa10.36□□□□□ -0.75
CKS1B-206ENST00000474215 CA7P43166 264 aa10.36□□□□□ -0.75
CKS1B-206ENST00000474215 CCT5P48643 541 aa10.36□□□□□ -0.75
CKS1B-206ENST00000474215 XKP51811 444 aa10.36□□□□□ -0.75
CKS1B-206ENST00000474215 CASP6P55212 293 aa10.36□□□□□ -0.75
CKS1B-206ENST00000474215 PKNOX1P55347 436 aa10.36□□□□□ -0.75
CKS1B-206ENST00000474215 GALNT1Q10472 559 aaPredicted RBP10.36□□□□□ -0.75
CKS1B-206ENST00000474215 TBL3Q12788 808 aaKnown RBP10.36□□□□□ -0.75
CKS1B-206ENST00000474215 ASPHQ12797 758 aa10.36□□□□□ -0.75
CKS1B-206ENST00000474215 LCP2Q13094 533 aa10.36□□□□□ -0.75
CKS1B-206ENST00000474215 SPRED3Q2MJR0 410 aa10.36□□□□□ -0.75
CKS1B-206ENST00000474215 PIGGQ5H8A4 983 aa10.36□□□□□ -0.75
CKS1B-206ENST00000474215 HIST2H2BCQ6DN03 193 aa10.36□□□□□ -0.75
CKS1B-206ENST00000474215 BNC2Q6ZN30 1099 aaPredicted RBP10.36□□□□□ -0.75
CKS1B-206ENST00000474215 RTL4Q6ZR62 310 aa10.36□□□□□ -0.75
CKS1B-206ENST00000474215 SPPL2CQ8IUH8 684 aa10.36□□□□□ -0.75
CKS1B-206ENST00000474215 C9orf40Q8IXQ3 194 aa10.36□□□□□ -0.75
CKS1B-206ENST00000474215 PSD4Q8NDX1 1056 aa10.36□□□□□ -0.75
CKS1B-206ENST00000474215 OR4K14Q8NGD5 310 aa10.36□□□□□ -0.75
CKS1B-206ENST00000474215 C16orf52Q8NHV5 167 aa10.36□□□□□ -0.75
CKS1B-206ENST00000474215 NUBPLQ8TB37 319 aa10.36□□□□□ -0.75
CKS1B-206ENST00000474215 DOK4Q8TEW6 326 aa10.36□□□□□ -0.75
CKS1B-206ENST00000474215 MAGED4Q96JG8 741 aa10.36□□□□□ -0.75
CKS1B-206ENST00000474215 SGCZQ96LD1 299 aa10.36□□□□□ -0.75
CKS1B-206ENST00000474215 CNPPD1Q9BV87 410 aa10.36□□□□□ -0.75
CKS1B-206ENST00000474215 ANKZF1Q9H8Y5 726 aa10.36□□□□□ -0.75
CKS1B-206ENST00000474215 VPS29Q9UBQ0 182 aa10.36□□□□□ -0.75
CKS1B-206ENST00000474215 GRID1Q9ULK0 1009 aa10.36□□□□□ -0.75
CKS1B-206ENST00000474215 ZNF835Q9Y2P0 537 aa10.36□□□□□ -0.75
CKS1B-206ENST00000474215 DOPEY1Q5JWR5 2465 aa10.35□□□□□ -0.75
CKS1B-206ENST00000474215 CCDC151A5D8V7 595 aa10.35□□□□□ -0.75
CKS1B-206ENST00000474215 SMIM23A6NLE4 172 aa10.35□□□□□ -0.75
CKS1B-206ENST00000474215 ZNF354AO60765 605 aaPredicted RBP10.35□□□□□ -0.75
CKS1B-206ENST00000474215 CDH16O75309 829 aa10.35□□□□□ -0.75
CKS1B-206ENST00000474215 ESRRBO95718 433 aa10.35□□□□□ -0.75
CKS1B-206ENST00000474215 PROCP04070 461 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms