RNA–Protein interactions for RNA: ENST00000472725.5

SF1-213, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 632 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-213ENST00000472725 PCDHGA9Q9Y5G4 932 aaKnown RBP18.69■□□□□ 0.58
SF1-213ENST00000472725 CLCA3PQ9Y6N3 262 aa18.69■□□□□ 0.58
SF1-213ENST00000472725 CROCCQ5TZA2 2017 aa18.69■□□□□ 0.58
SF1-213ENST00000472725 PKD1L2Q7Z442 2459 aa18.68■□□□□ 0.58
SF1-213ENST00000472725 TCP11X1B4DZS4 312 aa18.68■□□□□ 0.58
SF1-213ENST00000472725 SFTPCP11686 197 aa18.68■□□□□ 0.58
SF1-213ENST00000472725 PORP16435 677 aaPredicted RBP18.68■□□□□ 0.58
SF1-213ENST00000472725 TACR1P25103 407 aa18.68■□□□□ 0.58
SF1-213ENST00000472725 ALDH9A1P49189 494 aa18.68■□□□□ 0.58
SF1-213ENST00000472725 XKP51811 444 aa18.68■□□□□ 0.58
SF1-213ENST00000472725 C21orf58P58505 322 aa18.68■□□□□ 0.58
SF1-213ENST00000472725 CEBPEQ15744 281 aa18.68■□□□□ 0.58
SF1-213ENST00000472725 SPRED3Q2MJR0 410 aa18.68■□□□□ 0.58
SF1-213ENST00000472725 EPGNQ6UW88 154 aa18.68■□□□□ 0.58
SF1-213ENST00000472725 GALNT16Q8N428 558 aa18.68■□□□□ 0.58
SF1-213ENST00000472725 NATD1Q8N6N6 113 aa18.68■□□□□ 0.58
SF1-213ENST00000472725 NFAM1Q8NET5 270 aaPredicted RBP18.68■□□□□ 0.58
SF1-213ENST00000472725 B3GNT7Q8NFL0 401 aa18.68■□□□□ 0.58
SF1-213ENST00000472725 CEP70Q8NHQ1 597 aa18.68■□□□□ 0.58
SF1-213ENST00000472725 EXTL1Q92935 676 aa18.68■□□□□ 0.58
SF1-213ENST00000472725 KLHL29Q96CT2 875 aa18.68■□□□□ 0.58
SF1-213ENST00000472725 MESP1Q9BRJ9 268 aa18.68■□□□□ 0.58
SF1-213ENST00000472725 ARHGAP9Q9BRR9 750 aa18.68■□□□□ 0.58
SF1-213ENST00000472725 LHPPQ9H008 270 aa18.68■□□□□ 0.58
SF1-213ENST00000472725 REEP4Q9H6H4 257 aa18.68■□□□□ 0.58
SF1-213ENST00000472725 SLC35C2Q9NQQ7 365 aa18.68■□□□□ 0.58
SF1-213ENST00000472725 PNO1Q9NRX1 252 aaKnown RBP18.68■□□□□ 0.58
SF1-213ENST00000472725 PCDHGB7Q9Y5F8 929 aa18.68■□□□□ 0.58
SF1-213ENST00000472725 ZFHX4Q86UP3 3567 aa18.68■□□□□ 0.58
SF1-213ENST00000472725 MED13Q9UHV7 2174 aa18.67■□□□□ 0.58
SF1-213ENST00000472725 IGHV3-20A0A0C4DH32 117 aa18.67■□□□□ 0.58
SF1-213ENST00000472725 MKRN2OSH3BPM6 223 aa18.67■□□□□ 0.58
SF1-213ENST00000472725 OR10H2O60403 315 aa18.67■□□□□ 0.58
SF1-213ENST00000472725 ATP1B1P05026 303 aa18.67■□□□□ 0.58
SF1-213ENST00000472725 CPMP14384 443 aa18.67■□□□□ 0.58
SF1-213ENST00000472725 PRPS1L1P21108 318 aa18.67■□□□□ 0.58
SF1-213ENST00000472725 POLE2P56282 527 aa18.67■□□□□ 0.58
SF1-213ENST00000472725 MYBPC3Q14896 1274 aa18.67■□□□□ 0.58
SF1-213ENST00000472725 BTBD16Q32M84 506 aa18.67■□□□□ 0.58
SF1-213ENST00000472725 FAM47EQ6ZV65 393 aa18.67■□□□□ 0.58
SF1-213ENST00000472725 OR4N5Q8IXE1 308 aa18.67■□□□□ 0.58
SF1-213ENST00000472725 LIX1Q8N485 282 aa18.67■□□□□ 0.58
SF1-213ENST00000472725 PTPMT1Q8WUK0 201 aaPredicted RBP18.67■□□□□ 0.58
SF1-213ENST00000472725 EGLN2Q96KS0 407 aa18.67■□□□□ 0.58
SF1-213ENST00000472725 PPP1R36Q96LQ0 422 aa18.67■□□□□ 0.58
SF1-213ENST00000472725 ZNF681Q96N22 645 aa18.67■□□□□ 0.58
SF1-213ENST00000472725 TSSK3Q96PN8 268 aa18.67■□□□□ 0.58
SF1-213ENST00000472725 RYDENQ9NUL5 291 aaKnown RBP18.67■□□□□ 0.58
SF1-213ENST00000472725 GIMAP2Q9UG22 337 aa18.67■□□□□ 0.58
SF1-213ENST00000472725 ENTPD4Q9Y227 616 aa18.67■□□□□ 0.58
SF1-213ENST00000472725 C17orf105B2RV13 164 aa18.66■□□□□ 0.58
SF1-213ENST00000472725 CDK2AP1O14519 115 aa18.66■□□□□ 0.58
SF1-213ENST00000472725 ERAL1O75616 437 aaKnown RBP18.66■□□□□ 0.58
SF1-213ENST00000472725 SLITRK5O94991 958 aa18.66■□□□□ 0.58
SF1-213ENST00000472725 TNNI3P19429 210 aa18.66■□□□□ 0.58
SF1-213ENST00000472725 EPHA3P29320 983 aa18.66■□□□□ 0.58
SF1-213ENST00000472725 HPCAL1P37235 193 aa18.66■□□□□ 0.58
SF1-213ENST00000472725 CCL11P51671 97 aa18.66■□□□□ 0.58
SF1-213ENST00000472725 IRX1P78414 480 aaPredicted RBP18.66■□□□□ 0.58
SF1-213ENST00000472725 GUCY1A3Q02108 690 aa18.66■□□□□ 0.58
SF1-213ENST00000472725 ID2Q02363 134 aa18.66■□□□□ 0.58
SF1-213ENST00000472725 PDE7AQ13946 482 aa18.66■□□□□ 0.58
SF1-213ENST00000472725 LINC00303Q3SY05 128 aa18.66■□□□□ 0.58
SF1-213ENST00000472725 ACAD11Q709F0 780 aa18.66■□□□□ 0.58
SF1-213ENST00000472725 HPS6Q86YV9 775 aa18.66■□□□□ 0.58
SF1-213ENST00000472725 TICAM1Q8IUC6 712 aa18.66■□□□□ 0.58
SF1-213ENST00000472725 LSM14AQ8ND56 463 aaKnown RBP18.66■□□□□ 0.58
SF1-213ENST00000472725 CDC26Q8NHZ8 85 aa18.66■□□□□ 0.58
SF1-213ENST00000472725 ELP5Q8TE02 316 aa18.66■□□□□ 0.58
SF1-213ENST00000472725 UCN3Q969E3 161 aa18.66■□□□□ 0.58
SF1-213ENST00000472725 VMP1Q96GC9 406 aa18.66■□□□□ 0.58
SF1-213ENST00000472725 PRPF18Q99633 342 aaKnown RBP18.66■□□□□ 0.58
SF1-213ENST00000472725 CCDC28BQ9BUN5 200 aa18.66■□□□□ 0.58
SF1-213ENST00000472725 C1orf50Q9BV19 199 aa18.66■□□□□ 0.58
SF1-213ENST00000472725 TRIM55Q9BYV6 548 aa18.66■□□□□ 0.58
SF1-213ENST00000472725 EXO1Q9UQ84 846 aaKnown RBP18.66■□□□□ 0.58
SF1-213ENST00000472725 DOCK10Q96BY6 2186 aa18.65■□□□□ 0.58
SF1-213ENST00000472725 WASHC1A8K0Z3 465 aa18.65■□□□□ 0.58
SF1-213ENST00000472725 ALPPP05187 535 aa18.65■□□□□ 0.58
SF1-213ENST00000472725 ITGA3P26006 1051 aa18.65■□□□□ 0.58
SF1-213ENST00000472725 MPIP34949 423 aa18.65■□□□□ 0.58
SF1-213ENST00000472725 GPR143P51810 404 aa18.65■□□□□ 0.58
SF1-213ENST00000472725 CLDN8P56748 225 aa18.65■□□□□ 0.58
SF1-213ENST00000472725 Q0VFX4 171 aa18.65■□□□□ 0.58
SF1-213ENST00000472725 CHAF1BQ13112 559 aa18.65■□□□□ 0.58
SF1-213ENST00000472725 C6orf163Q5TEZ5 329 aa18.65■□□□□ 0.58
SF1-213ENST00000472725 VWA5B1Q5TIE3 1220 aa18.65■□□□□ 0.58
SF1-213ENST00000472725 H3F3CQ6NXT2 135 aa18.65■□□□□ 0.58
SF1-213ENST00000472725 MAVSQ7Z434 540 aa18.65■□□□□ 0.58
SF1-213ENST00000472725 MMP21Q8N119 569 aa18.65■□□□□ 0.58
SF1-213ENST00000472725 LRRC25Q8N386 305 aaPredicted RBP18.65■□□□□ 0.58
SF1-213ENST00000472725 RIT1Q92963 219 aa18.65■□□□□ 0.58
SF1-213ENST00000472725 PPCDCQ96CD2 204 aa18.65■□□□□ 0.58
SF1-213ENST00000472725 ERP27Q96DN0 273 aa18.65■□□□□ 0.58
SF1-213ENST00000472725 CNRIP1Q96F85 164 aaPredicted RBP18.65■□□□□ 0.58
SF1-213ENST00000472725 FBXL20Q96IG2 436 aa18.65■□□□□ 0.58
SF1-213ENST00000472725 THOC3Q96J01 351 aaKnown RBP18.65■□□□□ 0.58
SF1-213ENST00000472725 SEMA4CQ9C0C4 833 aa18.65■□□□□ 0.58
SF1-213ENST00000472725 WDR55Q9H6Y2 383 aaPredicted RBP18.65■□□□□ 0.58
SF1-213ENST00000472725 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms