RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 NPIPA5E9PKD4 350 aa12.56□□□□□ -0.4
HMGN1-211ENST00000471260 POC1B-GALNT4F8VUJ3 575 aa12.56□□□□□ -0.4
HMGN1-211ENST00000471260 H0YIV9 168 aa12.56□□□□□ -0.4
HMGN1-211ENST00000471260 CCL21O00585 134 aa12.56□□□□□ -0.4
HMGN1-211ENST00000471260 ALDOAP04075 364 aaKnown RBP12.56□□□□□ -0.4
HMGN1-211ENST00000471260 INHBAP08476 426 aa12.56□□□□□ -0.4
HMGN1-211ENST00000471260 ZNF24P17028 368 aa12.56□□□□□ -0.4
HMGN1-211ENST00000471260 AGAP20933 346 aa12.56□□□□□ -0.4
HMGN1-211ENST00000471260 PTX3P26022 381 aaPredicted RBP12.56□□□□□ -0.4
HMGN1-211ENST00000471260 COL8A1P27658 744 aa12.56□□□□□ -0.4
HMGN1-211ENST00000471260 PPP2R1BP30154 601 aa12.56□□□□□ -0.4
HMGN1-211ENST00000471260 GMPRP36959 345 aa12.56□□□□□ -0.4
HMGN1-211ENST00000471260 SSR2P43308 183 aa12.56□□□□□ -0.4
HMGN1-211ENST00000471260 SERPINB9P50453 376 aa12.56□□□□□ -0.4
HMGN1-211ENST00000471260 SSR4P51571 173 aa12.56□□□□□ -0.4
HMGN1-211ENST00000471260 IRF9Q00978 393 aa12.56□□□□□ -0.4
HMGN1-211ENST00000471260 BMPR2Q13873 1038 aa12.56□□□□□ -0.4
HMGN1-211ENST00000471260 FAM91A1Q658Y4 838 aa12.56□□□□□ -0.4
HMGN1-211ENST00000471260 OR4C11Q6IEV9 310 aa12.56□□□□□ -0.4
HMGN1-211ENST00000471260 HSDL2Q6YN16 418 aa12.56□□□□□ -0.4
HMGN1-211ENST00000471260 ZNF793Q6ZN11 406 aa12.56□□□□□ -0.4
HMGN1-211ENST00000471260 ZCCHC7Q8N3Z6 543 aaKnown RBP12.56□□□□□ -0.4
HMGN1-211ENST00000471260 ZNF808Q8N4W9 903 aaPredicted RBP12.56□□□□□ -0.4
HMGN1-211ENST00000471260 OR5L2Q8NGL0 311 aa12.56□□□□□ -0.4
HMGN1-211ENST00000471260 HUS1BQ8NHY5 278 aa12.56□□□□□ -0.4
HMGN1-211ENST00000471260 RAB3IL1Q8TBN0 382 aa12.56□□□□□ -0.4
HMGN1-211ENST00000471260 SLC44A1Q8WWI5 657 aa12.56□□□□□ -0.4
HMGN1-211ENST00000471260 ISL2Q96A47 359 aa12.56□□□□□ -0.4
HMGN1-211ENST00000471260 MTBPQ96DY7 904 aa12.56□□□□□ -0.4
HMGN1-211ENST00000471260 APOPT1Q96IL0 206 aa12.56□□□□□ -0.4
HMGN1-211ENST00000471260 MAGED4Q96JG8 741 aa12.56□□□□□ -0.4
HMGN1-211ENST00000471260 GPR78Q96P69 363 aa12.56□□□□□ -0.4
HMGN1-211ENST00000471260 MAPKAP1Q9BPZ7 522 aa12.56□□□□□ -0.4
HMGN1-211ENST00000471260 ACTR8Q9H981 624 aa12.56□□□□□ -0.4
HMGN1-211ENST00000471260 PRM3Q9NNZ6 103 aa12.56□□□□□ -0.4
HMGN1-211ENST00000471260 SAR1AQ9NR31 198 aa12.56□□□□□ -0.4
HMGN1-211ENST00000471260 MYOTQ9UBF9 498 aa12.56□□□□□ -0.4
HMGN1-211ENST00000471260 ZNF223Q9UK11 482 aaPredicted RBP12.56□□□□□ -0.4
HMGN1-211ENST00000471260 TMCO1Q9UM00 188 aa12.56□□□□□ -0.4
HMGN1-211ENST00000471260 NPIPA1Q9UND3 350 aa12.56□□□□□ -0.4
HMGN1-211ENST00000471260 IKBKGQ9Y6K9 419 aa12.56□□□□□ -0.4
HMGN1-211ENST00000471260 CROCCQ5TZA2 2017 aa12.55□□□□□ -0.4
HMGN1-211ENST00000471260 CACNA1DQ01668 2161 aa12.55□□□□□ -0.4
HMGN1-211ENST00000471260 KLF11O14901 512 aa12.55□□□□□ -0.4
HMGN1-211ENST00000471260 TGDSO95455 350 aa12.55□□□□□ -0.4
HMGN1-211ENST00000471260 RBP1P09455 135 aa12.55□□□□□ -0.4
HMGN1-211ENST00000471260 COL6A2P12110 1019 aa12.55□□□□□ -0.4
HMGN1-211ENST00000471260 COX7A2P14406 83 aa12.55□□□□□ -0.4
HMGN1-211ENST00000471260 CPN2P22792 545 aa12.55□□□□□ -0.4
HMGN1-211ENST00000471260 CNTFP26441 200 aa12.55□□□□□ -0.4
HMGN1-211ENST00000471260 TLX1P31314 330 aaPredicted RBP12.55□□□□□ -0.4
HMGN1-211ENST00000471260 ST13P50502 369 aaKnown RBP12.55□□□□□ -0.4
HMGN1-211ENST00000471260 RAP1GDS1P52306 607 aa12.55□□□□□ -0.4
HMGN1-211ENST00000471260 SRSF11Q05519 484 aaKnown RBP12.55□□□□□ -0.4
HMGN1-211ENST00000471260 CUL3Q13618 768 aa12.55□□□□□ -0.4
HMGN1-211ENST00000471260 GTF2H2Q13888 395 aa12.55□□□□□ -0.4
HMGN1-211ENST00000471260 C10orf62Q5T681 223 aaPredicted RBP12.55□□□□□ -0.4
HMGN1-211ENST00000471260 LGSNQ5TDP6 509 aa12.55□□□□□ -0.4
HMGN1-211ENST00000471260 ZNF787Q6DD87 383 aa12.55□□□□□ -0.4
HMGN1-211ENST00000471260 GTF2H2CQ6P1K8 395 aa12.55□□□□□ -0.4
HMGN1-211ENST00000471260 XKRXQ6PP77 449 aa12.55□□□□□ -0.4
HMGN1-211ENST00000471260 CLNKQ7Z7G1 428 aa12.55□□□□□ -0.4
HMGN1-211ENST00000471260 SULF2Q8IWU5 870 aa12.55□□□□□ -0.4
HMGN1-211ENST00000471260 EID3Q8N140 333 aa12.55□□□□□ -0.4
HMGN1-211ENST00000471260 CYP4Z2PQ8N1L4 340 aa12.55□□□□□ -0.4
HMGN1-211ENST00000471260 CPSF7Q8N684 471 aaKnown RBP12.55□□□□□ -0.4
HMGN1-211ENST00000471260 FITM2Q8N6M3 262 aa12.55□□□□□ -0.4
HMGN1-211ENST00000471260 BANPQ8N9N5 519 aa12.55□□□□□ -0.4
HMGN1-211ENST00000471260 L3MBTL4Q8NA19 623 aa12.55□□□□□ -0.4
HMGN1-211ENST00000471260 C16orf52Q8NHV5 167 aa12.55□□□□□ -0.4
HMGN1-211ENST00000471260 PTPMT1Q8WUK0 201 aaPredicted RBP12.55□□□□□ -0.4
HMGN1-211ENST00000471260 DCAKDQ8WVC6 231 aa12.55□□□□□ -0.4
HMGN1-211ENST00000471260 C10orf82Q8WW14 230 aa12.55□□□□□ -0.4
HMGN1-211ENST00000471260 ITLN2Q8WWU7 325 aaPredicted RBP12.55□□□□□ -0.4
HMGN1-211ENST00000471260 TANKQ92844 425 aa12.55□□□□□ -0.4
HMGN1-211ENST00000471260 MRRFQ96E11 262 aaKnown RBP12.55□□□□□ -0.4
HMGN1-211ENST00000471260 CCDC120Q96HB5 630 aa12.55□□□□□ -0.4
HMGN1-211ENST00000471260 LRRC37BQ96QE4 947 aa12.55□□□□□ -0.4
HMGN1-211ENST00000471260 TIMMDC1Q9NPL8 285 aa12.55□□□□□ -0.4
HMGN1-211ENST00000471260 DMRT3Q9NQL9 472 aa12.55□□□□□ -0.4
HMGN1-211ENST00000471260 PHF11Q9UIL8 331 aa12.55□□□□□ -0.4
HMGN1-211ENST00000471260 PPT2Q9UMR5 302 aa12.55□□□□□ -0.4
HMGN1-211ENST00000471260 NOTCH2Q04721 2471 aa12.55□□□□□ -0.4
HMGN1-211ENST00000471260 UNC79Q9P2D8 2635 aa12.55□□□□□ -0.4
HMGN1-211ENST00000471260 A8MVJ9 347 aa12.54□□□□□ -0.4
HMGN1-211ENST00000471260 FOXE1O00358 373 aaPredicted RBP12.54□□□□□ -0.4
HMGN1-211ENST00000471260 RTCAO00442 366 aaKnown RBP12.54□□□□□ -0.4
HMGN1-211ENST00000471260 HNRNPRO43390 633 aaKnown RBP12.54□□□□□ -0.4
HMGN1-211ENST00000471260 DYRK3O43781 588 aa12.54□□□□□ -0.4
HMGN1-211ENST00000471260 PEX1O43933 1283 aa12.54□□□□□ -0.4
HMGN1-211ENST00000471260 LDB3O75112 727 aa12.54□□□□□ -0.4
HMGN1-211ENST00000471260 KRT38O76015 456 aa12.54□□□□□ -0.4
HMGN1-211ENST00000471260 WISP2O76076 250 aa12.54□□□□□ -0.4
HMGN1-211ENST00000471260 DHRS4L1P0CG22 281 aa12.54□□□□□ -0.4
HMGN1-211ENST00000471260 ESRRAP11474 423 aaPredicted RBP12.54□□□□□ -0.4
HMGN1-211ENST00000471260 TNNI3P19429 210 aa12.54□□□□□ -0.4
HMGN1-211ENST00000471260 MAGEA12P43365 314 aa12.54□□□□□ -0.4
HMGN1-211ENST00000471260 MEOX1P50221 254 aa12.54□□□□□ -0.4
HMGN1-211ENST00000471260 IGLV3-21P80748 117 aaPredicted RBP12.54□□□□□ -0.4
HMGN1-211ENST00000471260 SLC18A2Q05940 514 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms