RNA–Protein interactions for RNA: ENST00000470737.1

SEMA3F-208, Transcript of semaphorin 3F, humanhuman

TSL 5

Gene SEMA3F, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-208ENST00000470737 BMP5P22003 454 aa12.78□□□□□ -0.36
SEMA3F-208ENST00000470737 HIST1H1TP22492 207 aaPredicted RBP12.78□□□□□ -0.36
SEMA3F-208ENST00000470737 ATP5A1P25705 553 aaKnown RBP12.78□□□□□ -0.36
SEMA3F-208ENST00000470737 GGT5P36269 586 aa12.78□□□□□ -0.36
SEMA3F-208ENST00000470737 STT3AP46977 705 aa12.78□□□□□ -0.36
SEMA3F-208ENST00000470737 ASCL1P50553 236 aa12.78□□□□□ -0.36
SEMA3F-208ENST00000470737 PLIN5Q00G26 463 aa12.78□□□□□ -0.36
SEMA3F-208ENST00000470737 POU4F1Q01851 419 aa12.78□□□□□ -0.36
SEMA3F-208ENST00000470737 PDIA2Q13087 525 aaKnown RBP12.78□□□□□ -0.36
SEMA3F-208ENST00000470737 CHIT1Q13231 466 aa12.78□□□□□ -0.36
SEMA3F-208ENST00000470737 SF3B4Q15427 424 aaKnown RBP eCLIP12.78□□□□□ -0.36
SEMA3F-208ENST00000470737 TMEM35AQ53FP2 167 aa12.78□□□□□ -0.36
SEMA3F-208ENST00000470737 FBXO48Q5FWF7 155 aa12.78□□□□□ -0.36
SEMA3F-208ENST00000470737 PRAMEF20Q5VT98 475 aa12.78□□□□□ -0.36
SEMA3F-208ENST00000470737 ADNP2Q6IQ32 1131 aa12.78□□□□□ -0.36
SEMA3F-208ENST00000470737 ZNF793Q6ZN11 406 aa12.78□□□□□ -0.36
SEMA3F-208ENST00000470737 SLC29A4Q7RTT9 530 aa12.78□□□□□ -0.36
SEMA3F-208ENST00000470737 ULK2Q8IYT8 1036 aa12.78□□□□□ -0.36
SEMA3F-208ENST00000470737 FBXO36Q8NEA4 188 aa12.78□□□□□ -0.36
SEMA3F-208ENST00000470737 PAQR8Q8TEZ7 354 aa12.78□□□□□ -0.36
SEMA3F-208ENST00000470737 FAM222BQ8WU58 562 aa12.78□□□□□ -0.36
SEMA3F-208ENST00000470737 ESAMQ96AP7 390 aa12.78□□□□□ -0.36
SEMA3F-208ENST00000470737 ANKRD9Q96BM1 317 aaPredicted RBP12.78□□□□□ -0.36
SEMA3F-208ENST00000470737 WDR34Q96EX3 536 aa12.78□□□□□ -0.36
SEMA3F-208ENST00000470737 SENP5Q96HI0 755 aaPredicted RBP12.78□□□□□ -0.36
SEMA3F-208ENST00000470737 GAL3ST4Q96RP7 486 aa12.78□□□□□ -0.36
SEMA3F-208ENST00000470737 CENPKQ9BS16 269 aa12.78□□□□□ -0.36
SEMA3F-208ENST00000470737 MS4A8Q9BY19 250 aa12.78□□□□□ -0.36
SEMA3F-208ENST00000470737 RYDENQ9NUL5 291 aaKnown RBP12.78□□□□□ -0.36
SEMA3F-208ENST00000470737 MS4A12Q9NXJ0 267 aa12.78□□□□□ -0.36
SEMA3F-208ENST00000470737 TXNDC16Q9P2K2 825 aa12.78□□□□□ -0.36
SEMA3F-208ENST00000470737 MTRF1LQ9UGC7 380 aaKnown RBP12.78□□□□□ -0.36
SEMA3F-208ENST00000470737 ACANP16112 2415 aa12.77□□□□□ -0.37
SEMA3F-208ENST00000470737 C15orf38-AP3S2A0A0A6YYH1 394 aa12.77□□□□□ -0.37
SEMA3F-208ENST00000470737 IQANK1A0A1B0GTG1 560 aa12.77□□□□□ -0.37
SEMA3F-208ENST00000470737 A6NNC1 897 aa12.77□□□□□ -0.37
SEMA3F-208ENST00000470737 RTCAO00442 366 aaKnown RBP12.77□□□□□ -0.37
SEMA3F-208ENST00000470737 SYT5O00445 386 aa12.77□□□□□ -0.37
SEMA3F-208ENST00000470737 SH3BGRLO75368 114 aa12.77□□□□□ -0.37
SEMA3F-208ENST00000470737 FAM155BO75949 473 aa12.77□□□□□ -0.37
SEMA3F-208ENST00000470737 CCDC166P0CW27 439 aa12.77□□□□□ -0.37
SEMA3F-208ENST00000470737 ENDOUP21128 410 aaKnown RBP12.77□□□□□ -0.37
SEMA3F-208ENST00000470737 GDF1P27539 372 aa12.77□□□□□ -0.37
SEMA3F-208ENST00000470737 SERPINB3P29508 390 aa12.77□□□□□ -0.37
SEMA3F-208ENST00000470737 SERPINB1P30740 379 aa12.77□□□□□ -0.37
SEMA3F-208ENST00000470737 TLX1P31314 330 aaPredicted RBP12.77□□□□□ -0.37
SEMA3F-208ENST00000470737 TRPC1P48995 793 aa12.77□□□□□ -0.37
SEMA3F-208ENST00000470737 RAP1GDS1P52306 607 aa12.77□□□□□ -0.37
SEMA3F-208ENST00000470737 ATP6V0D1P61421 351 aa12.77□□□□□ -0.37
SEMA3F-208ENST00000470737 FOXD4Q12950 439 aaPredicted RBP12.77□□□□□ -0.37
SEMA3F-208ENST00000470737 ZNF791Q3KP31 576 aaPredicted RBP12.77□□□□□ -0.37
SEMA3F-208ENST00000470737 C8orf74Q6P047 294 aa12.77□□□□□ -0.37
SEMA3F-208ENST00000470737 MED27Q6P2C8 311 aa12.77□□□□□ -0.37
SEMA3F-208ENST00000470737 CAMKMTQ7Z624 323 aa12.77□□□□□ -0.37
SEMA3F-208ENST00000470737 CDC20BQ86Y33 519 aa12.77□□□□□ -0.37
SEMA3F-208ENST00000470737 OR4N5Q8IXE1 308 aa12.77□□□□□ -0.37
SEMA3F-208ENST00000470737 C9orf40Q8IXQ3 194 aa12.77□□□□□ -0.37
SEMA3F-208ENST00000470737 NEIL3Q8TAT5 605 aa12.77□□□□□ -0.37
SEMA3F-208ENST00000470737 CDKL2Q92772 493 aa12.77□□□□□ -0.37
SEMA3F-208ENST00000470737 EXT2Q93063 718 aa12.77□□□□□ -0.37
SEMA3F-208ENST00000470737 RNASE6Q93091 150 aaKnown RBP12.77□□□□□ -0.37
SEMA3F-208ENST00000470737 ALPK1Q96QP1 1244 aa12.77□□□□□ -0.37
SEMA3F-208ENST00000470737 DOHHQ9BU89 302 aa12.77□□□□□ -0.37
SEMA3F-208ENST00000470737 SLC6A15Q9H2J7 730 aa12.77□□□□□ -0.37
SEMA3F-208ENST00000470737 DPH5Q9H2P9 285 aa12.77□□□□□ -0.37
SEMA3F-208ENST00000470737 LIME1Q9H400 295 aa12.77□□□□□ -0.37
SEMA3F-208ENST00000470737 RPF2Q9H7B2 306 aaKnown RBP12.77□□□□□ -0.37
SEMA3F-208ENST00000470737 ACKR4Q9NPB9 350 aa12.77□□□□□ -0.37
SEMA3F-208ENST00000470737 FOXD3Q9UJU5 478 aaPredicted RBP12.77□□□□□ -0.37
SEMA3F-208ENST00000470737 RNF112Q9ULX5 631 aa12.77□□□□□ -0.37
SEMA3F-208ENST00000470737 MPDZO75970 2070 aa12.77□□□□□ -0.37
SEMA3F-208ENST00000470737 MAP1AP78559 2803 aaPredicted RBP12.76□□□□□ -0.37
SEMA3F-208ENST00000470737 CAPN14A8MX76 684 aa12.76□□□□□ -0.37
SEMA3F-208ENST00000470737 PROM1O43490 865 aa12.76□□□□□ -0.37
SEMA3F-208ENST00000470737 FGF17O60258 216 aa12.76□□□□□ -0.37
SEMA3F-208ENST00000470737 OR10H2O60403 315 aa12.76□□□□□ -0.37
SEMA3F-208ENST00000470737 PRAMEF4O60810 478 aa12.76□□□□□ -0.37
SEMA3F-208ENST00000470737 SCELO95171 688 aa12.76□□□□□ -0.37
SEMA3F-208ENST00000470737 TGFB1P01137 390 aa12.76□□□□□ -0.37
SEMA3F-208ENST00000470737 IL2RAP01589 272 aa12.76□□□□□ -0.37
SEMA3F-208ENST00000470737 RFPL3SP0C7P2 107 aa12.76□□□□□ -0.37
SEMA3F-208ENST00000470737 CTAGE8P0CG41 777 aa12.76□□□□□ -0.37
SEMA3F-208ENST00000470737 FOSL1P15407 271 aa12.76□□□□□ -0.37
SEMA3F-208ENST00000470737 HOXB4P17483 251 aaPredicted RBP12.76□□□□□ -0.37
SEMA3F-208ENST00000470737 CD22P20273 847 aa12.76□□□□□ -0.37
SEMA3F-208ENST00000470737 IGLV3-21P80748 117 aaPredicted RBP12.76□□□□□ -0.37
SEMA3F-208ENST00000470737 TBCCQ15814 346 aa12.76□□□□□ -0.37
SEMA3F-208ENST00000470737 TBCELQ5QJ74 424 aa12.76□□□□□ -0.37
SEMA3F-208ENST00000470737 PRAMEF9Q5VWM5 478 aa12.76□□□□□ -0.37
SEMA3F-208ENST00000470737 TMEM198Q66K66 360 aa12.76□□□□□ -0.37
SEMA3F-208ENST00000470737 RNF111Q6ZNA4 994 aa12.76□□□□□ -0.37
SEMA3F-208ENST00000470737 LRRC70Q7Z2Q7 622 aa12.76□□□□□ -0.37
SEMA3F-208ENST00000470737 CTAGE4Q8IX94 777 aa12.76□□□□□ -0.37
SEMA3F-208ENST00000470737 ZBED8Q8IZ13 594 aa12.76□□□□□ -0.37
SEMA3F-208ENST00000470737 TAGAPQ8N103 731 aa12.76□□□□□ -0.37
SEMA3F-208ENST00000470737 LRRC25Q8N386 305 aaPredicted RBP12.76□□□□□ -0.37
SEMA3F-208ENST00000470737 SPATA6LQ8N4H0 392 aa12.76□□□□□ -0.37
SEMA3F-208ENST00000470737 CEP112Q8N8E3 955 aa12.76□□□□□ -0.37
SEMA3F-208ENST00000470737 PDPRQ8NCN5 879 aa12.76□□□□□ -0.37
SEMA3F-208ENST00000470737 FBXO25Q8TCJ0 367 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms