RNA–Protein interactions for RNA: ENST00000470199.2

LMNA-211, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-211ENST00000470199 DGAT2Q96PD7 388 aa16.65■□□□□ 0.26
LMNA-211ENST00000470199 LIN28AQ9H9Z2 209 aaKnown RBP16.65■□□□□ 0.26
LMNA-211ENST00000470199 WDR41Q9HAD4 459 aa16.65■□□□□ 0.26
LMNA-211ENST00000470199 SIRT5Q9NXA8 310 aa16.65■□□□□ 0.26
LMNA-211ENST00000470199 PPIEQ9UNP9 301 aaKnown RBP16.65■□□□□ 0.26
LMNA-211ENST00000470199 CLCA3PQ9Y6N3 262 aa16.65■□□□□ 0.26
LMNA-211ENST00000470199 ATP6AP2A0A1C7CYW4 349 aa16.64■□□□□ 0.25
LMNA-211ENST00000470199 LSM1O15116 133 aaKnown RBP16.64■□□□□ 0.25
LMNA-211ENST00000470199 SUV39H1O43463 412 aa16.64■□□□□ 0.25
LMNA-211ENST00000470199 RGS14O43566 566 aa16.64■□□□□ 0.25
LMNA-211ENST00000470199 ATP6AP2O75787 350 aa16.64■□□□□ 0.25
LMNA-211ENST00000470199 UQCRHP07919 91 aa16.64■□□□□ 0.25
LMNA-211ENST00000470199 PRPH2P23942 346 aa16.64■□□□□ 0.25
LMNA-211ENST00000470199 SLC18A1P54219 525 aa16.64■□□□□ 0.25
LMNA-211ENST00000470199 TRA2BP62995 288 aaKnown RBP16.64■□□□□ 0.25
LMNA-211ENST00000470199 NR6A1Q15406 480 aa16.64■□□□□ 0.25
LMNA-211ENST00000470199 PLEKHN1Q494U1 663 aaPredicted RBP16.64■□□□□ 0.25
LMNA-211ENST00000470199 RFTN2Q52LD8 501 aaPredicted RBP16.64■□□□□ 0.25
LMNA-211ENST00000470199 ACER2Q5QJU3 275 aa16.64■□□□□ 0.25
LMNA-211ENST00000470199 SLC6A19Q695T7 634 aa16.64■□□□□ 0.25
LMNA-211ENST00000470199 NOXRED1Q6NXP6 359 aa16.64■□□□□ 0.25
LMNA-211ENST00000470199 RNF165Q6ZSG1 346 aa16.64■□□□□ 0.25
LMNA-211ENST00000470199 TMEM132CQ8N3T6 1108 aa16.64■□□□□ 0.25
LMNA-211ENST00000470199 Q8NA96 180 aa16.64■□□□□ 0.25
LMNA-211ENST00000470199 CDC26Q8NHZ8 85 aa16.64■□□□□ 0.25
LMNA-211ENST00000470199 SLC2A12Q8TD20 617 aa16.64■□□□□ 0.25
LMNA-211ENST00000470199 EGLN2Q96KS0 407 aa16.64■□□□□ 0.25
LMNA-211ENST00000470199 LMF1Q96S06 567 aa16.64■□□□□ 0.25
LMNA-211ENST00000470199 OR8D2Q9GZM6 311 aa16.64■□□□□ 0.25
LMNA-211ENST00000470199 CDCP1Q9H5V8 836 aa16.64■□□□□ 0.25
LMNA-211ENST00000470199 LRTM1Q9HBL6 345 aa16.64■□□□□ 0.25
LMNA-211ENST00000470199 PNPOQ9NVS9 261 aa16.64■□□□□ 0.25
LMNA-211ENST00000470199 NKIRAS1Q9NYS0 192 aa16.64■□□□□ 0.25
LMNA-211ENST00000470199 STMN3Q9NZ72 180 aa16.64■□□□□ 0.25
LMNA-211ENST00000470199 EXO1Q9UQ84 846 aaKnown RBP16.64■□□□□ 0.25
LMNA-211ENST00000470199 CFAP46Q8IYW2 2715 aa16.63■□□□□ 0.25
LMNA-211ENST00000470199 UQCRHLA0A096LP55 91 aa16.63■□□□□ 0.25
LMNA-211ENST00000470199 C1orf226A1L170 272 aa16.63■□□□□ 0.25
LMNA-211ENST00000470199 TMEM200CA6NKL6 621 aa16.63■□□□□ 0.25
LMNA-211ENST00000470199 NPIPB8E9PQR5 432 aa16.63■□□□□ 0.25
LMNA-211ENST00000470199 DPM1O60762 260 aa16.63■□□□□ 0.25
LMNA-211ENST00000470199 ERAL1O75616 437 aaKnown RBP16.63■□□□□ 0.25
LMNA-211ENST00000470199 WDPCPO95876 746 aa16.63■□□□□ 0.25
LMNA-211ENST00000470199 CHEK2O96017 543 aa16.63■□□□□ 0.25
LMNA-211ENST00000470199 CT62P0C5K7 136 aa16.63■□□□□ 0.25
LMNA-211ENST00000470199 PIK3R1P27986 724 aa16.63■□□□□ 0.25
LMNA-211ENST00000470199 FEN1P39748 380 aaKnown RBP16.63■□□□□ 0.25
LMNA-211ENST00000470199 XKP51811 444 aa16.63■□□□□ 0.25
LMNA-211ENST00000470199 C19orf57Q0VDD7 668 aa16.63■□□□□ 0.25
LMNA-211ENST00000470199 TERF2Q15554 542 aa16.63■□□□□ 0.25
LMNA-211ENST00000470199 GALNTL6Q49A17 601 aa16.63■□□□□ 0.25
LMNA-211ENST00000470199 XKR7Q5GH72 579 aa16.63■□□□□ 0.25
LMNA-211ENST00000470199 BEST3Q8N1M1 668 aa16.63■□□□□ 0.25
LMNA-211ENST00000470199 ZADH2Q8N4Q0 377 aa16.63■□□□□ 0.25
LMNA-211ENST00000470199 OR4K14Q8NGD5 310 aa16.63■□□□□ 0.25
LMNA-211ENST00000470199 OR14A16Q8NHC5 309 aa16.63■□□□□ 0.25
LMNA-211ENST00000470199 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.63■□□□□ 0.25
LMNA-211ENST00000470199 ZNF721Q8TF20 911 aa16.63■□□□□ 0.25
LMNA-211ENST00000470199 PPP1R36Q96LQ0 422 aa16.63■□□□□ 0.25
LMNA-211ENST00000470199 C1orf109Q9NX04 203 aa16.63■□□□□ 0.25
LMNA-211ENST00000470199 ANKRD10Q9NXR5 420 aa16.63■□□□□ 0.25
LMNA-211ENST00000470199 OR10H2O60403 315 aa16.62■□□□□ 0.25
LMNA-211ENST00000470199 PEX11AO75192 247 aa16.62■□□□□ 0.25
LMNA-211ENST00000470199 GUCY1B2O75343 617 aa16.62■□□□□ 0.25
LMNA-211ENST00000470199 SLC35E2P0CK97 266 aa16.62■□□□□ 0.25
LMNA-211ENST00000470199 GRK2P25098 689 aa16.62■□□□□ 0.25
LMNA-211ENST00000470199 CLCN2P51788 898 aa16.62■□□□□ 0.25
LMNA-211ENST00000470199 RPL38P63173 70 aaKnown RBP16.62■□□□□ 0.25
LMNA-211ENST00000470199 PLIN5Q00G26 463 aa16.62■□□□□ 0.25
LMNA-211ENST00000470199 C2orf80Q0P641 193 aa16.62■□□□□ 0.25
LMNA-211ENST00000470199 PDCD2Q16342 344 aaPredicted RBP16.62■□□□□ 0.25
LMNA-211ENST00000470199 ZNF468Q5VIY5 522 aaPredicted RBP16.62■□□□□ 0.25
LMNA-211ENST00000470199 ABHD17BQ5VST6 288 aa16.62■□□□□ 0.25
LMNA-211ENST00000470199 PRICKLE2Q7Z3G6 844 aa16.62■□□□□ 0.25
LMNA-211ENST00000470199 ST13P4Q8IZP2 240 aaPredicted RBP16.62■□□□□ 0.25
LMNA-211ENST00000470199 MORN4Q8NDC4 146 aa16.62■□□□□ 0.25
LMNA-211ENST00000470199 DAZLQ92904 295 aaKnown RBP16.62■□□□□ 0.25
LMNA-211ENST00000470199 KLHL29Q96CT2 875 aa16.62■□□□□ 0.25
LMNA-211ENST00000470199 CNRIP1Q96F85 164 aaPredicted RBP16.62■□□□□ 0.25
LMNA-211ENST00000470199 VMP1Q96GC9 406 aa16.62■□□□□ 0.25
LMNA-211ENST00000470199 RBM18Q96H35 190 aaKnown RBP16.62■□□□□ 0.25
LMNA-211ENST00000470199 SENP5Q96HI0 755 aaPredicted RBP16.62■□□□□ 0.25
LMNA-211ENST00000470199 FCRL1Q96LA6 429 aa16.62■□□□□ 0.25
LMNA-211ENST00000470199 DEFB126Q9BYW3 111 aa16.62■□□□□ 0.25
LMNA-211ENST00000470199 EPN3Q9H201 632 aa16.62■□□□□ 0.25
LMNA-211ENST00000470199 EPS8L2Q9H6S3 715 aa16.62■□□□□ 0.25
LMNA-211ENST00000470199 BAIAP2L1Q9UHR4 511 aa16.62■□□□□ 0.25
LMNA-211ENST00000470199 RAP2CQ9Y3L5 183 aa16.62■□□□□ 0.25
LMNA-211ENST00000470199 TLN1Q9Y490 2541 aaKnown RBP16.61■□□□□ 0.25
LMNA-211ENST00000470199 PYCARD-AS1I3L0S3 204 aa16.61■□□□□ 0.25
LMNA-211ENST00000470199 KLHL41O60662 606 aa16.61■□□□□ 0.25
LMNA-211ENST00000470199 CLPSP04118 112 aa16.61■□□□□ 0.25
LMNA-211ENST00000470199 CPMP14384 443 aa16.61■□□□□ 0.25
LMNA-211ENST00000470199 SOX18P35713 384 aa16.61■□□□□ 0.25
LMNA-211ENST00000470199 AP2B1P63010 937 aa16.61■□□□□ 0.25
LMNA-211ENST00000470199 ERVK-8P63133 956 aa16.61■□□□□ 0.25
LMNA-211ENST00000470199 ZNF763Q0D2J5 394 aa16.61■□□□□ 0.25
LMNA-211ENST00000470199 ZNF267Q14586 743 aaPredicted RBP16.61■□□□□ 0.25
LMNA-211ENST00000470199 LTB4RQ15722 352 aa16.61■□□□□ 0.25
LMNA-211ENST00000470199 PRR30Q53SZ7 412 aaPredicted RBP16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms