RNA–Protein interactions for RNA: ENST00000469717.5

TPM3-215, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 4,041 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-215ENST00000469717 ITGB7P26010 798 aa7.57□□□□□ -1.2
TPM3-215ENST00000469717 SGSHP51688 502 aa7.57□□□□□ -1.2
TPM3-215ENST00000469717 UPP1Q16831 310 aa7.57□□□□□ -1.2
TPM3-215ENST00000469717 C10orf120Q5SQS8 335 aa7.57□□□□□ -1.2
TPM3-215ENST00000469717 MTFR2Q6P444 385 aa7.57□□□□□ -1.2
TPM3-215ENST00000469717 PRSS42Q7Z5A4 293 aa7.57□□□□□ -1.2
TPM3-215ENST00000469717 RBM45Q8IUH3 476 aaKnown RBP7.57□□□□□ -1.2
TPM3-215ENST00000469717 LMNTD1Q8N9Z9 388 aa7.57□□□□□ -1.2
TPM3-215ENST00000469717 FOXJ1Q92949 421 aa7.57□□□□□ -1.2
TPM3-215ENST00000469717 GPR137Q96N19 417 aa7.57□□□□□ -1.2
TPM3-215ENST00000469717 NTMT1Q9BV86 223 aa7.57□□□□□ -1.2
TPM3-215ENST00000469717 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.57□□□□□ -1.2
TPM3-215ENST00000469717 CHST8Q9H2A9 424 aa7.57□□□□□ -1.2
TPM3-215ENST00000469717 ANKRA2Q9H9E1 313 aa7.57□□□□□ -1.2
TPM3-215ENST00000469717 SLC25A19Q9HC21 320 aa7.57□□□□□ -1.2
TPM3-215ENST00000469717 RAB23Q9ULC3 237 aa7.57□□□□□ -1.2
TPM3-215ENST00000469717 MAP4K5Q9Y4K4 846 aa7.57□□□□□ -1.2
TPM3-215ENST00000469717 CDH10Q9Y6N8 788 aa7.57□□□□□ -1.2
TPM3-215ENST00000469717 CDH23Q9H251 3354 aa7.57□□□□□ -1.2
TPM3-215ENST00000469717 HELZP42694 1942 aaKnown RBP7.57□□□□□ -1.2
TPM3-215ENST00000469717 LGALS8O00214 317 aa7.57□□□□□ -1.2
TPM3-215ENST00000469717 FFAR1O14842 300 aa7.57□□□□□ -1.2
TPM3-215ENST00000469717 CASKO14936 926 aa7.57□□□□□ -1.2
TPM3-215ENST00000469717 SEMA7AO75326 666 aa7.57□□□□□ -1.2
TPM3-215ENST00000469717 RECKO95980 971 aa7.57□□□□□ -1.2
TPM3-215ENST00000469717 RAF1P04049 648 aa7.57□□□□□ -1.2
TPM3-215ENST00000469717 PRKAR1AP10644 381 aa7.57□□□□□ -1.2
TPM3-215ENST00000469717 GJA1P17302 382 aa7.57□□□□□ -1.2
TPM3-215ENST00000469717 BTF3P20290 206 aaKnown RBP7.57□□□□□ -1.2
TPM3-215ENST00000469717 SLC6A4P31645 630 aa7.57□□□□□ -1.2
TPM3-215ENST00000469717 PTGER3P43115 390 aa7.57□□□□□ -1.2
TPM3-215ENST00000469717 PXNP49023 591 aaPredicted RBP7.57□□□□□ -1.2
TPM3-215ENST00000469717 INPP1P49441 399 aa7.57□□□□□ -1.2
TPM3-215ENST00000469717 RHAGQ02094 409 aa7.57□□□□□ -1.2
TPM3-215ENST00000469717 KIAA0907Q7Z7F0 614 aaPredicted RBP7.57□□□□□ -1.2
TPM3-215ENST00000469717 NANOGP1Q8N7R0 232 aa7.57□□□□□ -1.2
TPM3-215ENST00000469717 KLHL15Q96M94 604 aa7.57□□□□□ -1.2
TPM3-215ENST00000469717 RBP7Q96R05 134 aa7.57□□□□□ -1.2
TPM3-215ENST00000469717 HDHD2Q9H0R4 259 aa7.57□□□□□ -1.2
TPM3-215ENST00000469717 KCNN2Q9H2S1 579 aa7.57□□□□□ -1.2
TPM3-215ENST00000469717 NUDT15Q9NV35 164 aa7.57□□□□□ -1.2
TPM3-215ENST00000469717 TVP23BQ9NYZ1 205 aa7.57□□□□□ -1.2
TPM3-215ENST00000469717 TRPS1Q9UHF7 1281 aa7.57□□□□□ -1.2
TPM3-215ENST00000469717 MAPRE3Q9UPY8 281 aa7.57□□□□□ -1.2
TPM3-215ENST00000469717 PCDHB11Q9Y5F2 797 aa7.57□□□□□ -1.2
TPM3-215ENST00000469717 CHD5Q8TDI0 1954 aa7.57□□□□□ -1.2
TPM3-215ENST00000469717 TLX2O43763 284 aaPredicted RBP7.57□□□□□ -1.2
TPM3-215ENST00000469717 ORC5O43913 435 aa7.57□□□□□ -1.2
TPM3-215ENST00000469717 PPM1BO75688 479 aa7.57□□□□□ -1.2
TPM3-215ENST00000469717 RGS11O94810 467 aa7.57□□□□□ -1.2
TPM3-215ENST00000469717 TRBC1P01850 177 aa7.57□□□□□ -1.2
TPM3-215ENST00000469717 OR12D1P0DN82 309 aa7.57□□□□□ -1.2
TPM3-215ENST00000469717 CD22P20273 847 aa7.57□□□□□ -1.2
TPM3-215ENST00000469717 LHCGRP22888 699 aa7.57□□□□□ -1.2
TPM3-215ENST00000469717 HMGCLP35914 325 aa7.57□□□□□ -1.2
TPM3-215ENST00000469717 TALDO1P37837 337 aa7.57□□□□□ -1.2
TPM3-215ENST00000469717 SRP54P61011 504 aaKnown RBP7.57□□□□□ -1.2
TPM3-215ENST00000469717 RPS26P62854 115 aaKnown RBP7.57□□□□□ -1.2
TPM3-215ENST00000469717 CSTF1Q05048 431 aaKnown RBP7.57□□□□□ -1.2
TPM3-215ENST00000469717 GRB14Q14449 540 aa7.57□□□□□ -1.2
TPM3-215ENST00000469717 LGALSLQ3ZCW2 172 aaPredicted RBP7.57□□□□□ -1.2
TPM3-215ENST00000469717 ZNF385BQ569K4 471 aa7.57□□□□□ -1.2
TPM3-215ENST00000469717 RPS26P11Q5JNZ5 115 aaPredicted RBP7.57□□□□□ -1.2
TPM3-215ENST00000469717 ZNF697Q5TEC3 545 aa7.57□□□□□ -1.2
TPM3-215ENST00000469717 ALG1LQ6GMV1 187 aa7.57□□□□□ -1.2
TPM3-215ENST00000469717 ERICH5Q6P6B1 374 aa7.57□□□□□ -1.2
TPM3-215ENST00000469717 CD300LGQ6UXG3 332 aa7.57□□□□□ -1.2
TPM3-215ENST00000469717 ZNF730Q6ZMV8 503 aa7.57□□□□□ -1.2
TPM3-215ENST00000469717 KANSL1Q7Z3B3 1105 aa7.57□□□□□ -1.2
TPM3-215ENST00000469717 TECPR1Q7Z6L1 1165 aa7.57□□□□□ -1.2
TPM3-215ENST00000469717 SLC30A8Q8IWU4 369 aa7.57□□□□□ -1.2
TPM3-215ENST00000469717 ATAD1Q8NBU5 361 aa7.57□□□□□ -1.2
TPM3-215ENST00000469717 DUSP18Q8NEJ0 188 aa7.57□□□□□ -1.2
TPM3-215ENST00000469717 KLHL6Q8WZ60 621 aa7.57□□□□□ -1.2
TPM3-215ENST00000469717 MGME1Q9BQP7 344 aa7.57□□□□□ -1.2
TPM3-215ENST00000469717 SAP130Q9H0E3 1048 aa7.57□□□□□ -1.2
TPM3-215ENST00000469717 RDH8Q9NYR8 311 aa7.57□□□□□ -1.2
TPM3-215ENST00000469717 CPNE7Q9UBL6 633 aa7.57□□□□□ -1.2
TPM3-215ENST00000469717 SLC9A8Q9Y2E8 581 aa7.57□□□□□ -1.2
TPM3-215ENST00000469717 GPR52Q9Y2T5 361 aa7.57□□□□□ -1.2
TPM3-215ENST00000469717 PRKYO43930 277 aa7.56□□□□□ -1.2
TPM3-215ENST00000469717 LZTS3O60299 673 aaPredicted RBP7.56□□□□□ -1.2
TPM3-215ENST00000469717 CCL5P13501 91 aa7.56□□□□□ -1.2
TPM3-215ENST00000469717 BPIP17213 487 aa7.56□□□□□ -1.2
TPM3-215ENST00000469717 RPIAP49247 311 aa7.56□□□□□ -1.2
TPM3-215ENST00000469717 STK19P49842 368 aaPredicted RBP7.56□□□□□ -1.2
TPM3-215ENST00000469717 LIM2P55344 173 aa7.56□□□□□ -1.2
TPM3-215ENST00000469717 MRPS6P82932 125 aaKnown RBP7.56□□□□□ -1.2
TPM3-215ENST00000469717 MC1RQ01726 317 aa7.56□□□□□ -1.2
TPM3-215ENST00000469717 MTAPQ13126 283 aa7.56□□□□□ -1.2
TPM3-215ENST00000469717 COL9A2Q14055 689 aaPredicted RBP7.56□□□□□ -1.2
TPM3-215ENST00000469717 GPR176Q14439 515 aa7.56□□□□□ -1.2
TPM3-215ENST00000469717 TUSC1Q2TAM9 212 aa7.56□□□□□ -1.2
TPM3-215ENST00000469717 ATP13A5Q4VNC0 1218 aa7.56□□□□□ -1.2
TPM3-215ENST00000469717 IFI44LQ53G44 452 aa7.56□□□□□ -1.2
TPM3-215ENST00000469717 TRILQ7L0X0 811 aa7.56□□□□□ -1.2
TPM3-215ENST00000469717 C16orf59Q7L2K0 433 aa7.56□□□□□ -1.2
TPM3-215ENST00000469717 TAGAPQ8N103 731 aa7.56□□□□□ -1.2
TPM3-215ENST00000469717 ACBD6Q9BR61 282 aa7.56□□□□□ -1.2
TPM3-215ENST00000469717 TMEM43Q9BTV4 400 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms