RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 SYDE1Q6ZW31 735 aaPredicted RBP11.28□□□□□ -0.6
HDAC3-204ENST00000469207 CHSY3Q70JA7 882 aa11.28□□□□□ -0.6
HDAC3-204ENST00000469207 CMC1Q7Z7K0 106 aa11.28□□□□□ -0.6
HDAC3-204ENST00000469207 ISCA2Q86U28 154 aa11.28□□□□□ -0.6
HDAC3-204ENST00000469207 LAS2Q8IYD9 372 aa11.28□□□□□ -0.6
HDAC3-204ENST00000469207 ULK2Q8IYT8 1036 aa11.28□□□□□ -0.6
HDAC3-204ENST00000469207 RELL2Q8NC24 303 aaPredicted RBP11.28□□□□□ -0.6
HDAC3-204ENST00000469207 BBOF1Q8ND07 529 aa11.28□□□□□ -0.6
HDAC3-204ENST00000469207 NUBPLQ8TB37 319 aa11.28□□□□□ -0.6
HDAC3-204ENST00000469207 PAQR8Q8TEZ7 354 aa11.28□□□□□ -0.6
HDAC3-204ENST00000469207 PYROXD1Q8WU10 500 aa11.28□□□□□ -0.6
HDAC3-204ENST00000469207 SPACA9Q96E40 222 aaPredicted RBP11.28□□□□□ -0.6
HDAC3-204ENST00000469207 GAL3ST4Q96RP7 486 aa11.28□□□□□ -0.6
HDAC3-204ENST00000469207 MTERF1Q99551 399 aaKnown RBP11.28□□□□□ -0.6
HDAC3-204ENST00000469207 GPR22Q99680 433 aa11.28□□□□□ -0.6
HDAC3-204ENST00000469207 RBBP8Q99708 897 aa11.28□□□□□ -0.6
HDAC3-204ENST00000469207 ERVK-6Q9BXR3 956 aa11.28□□□□□ -0.6
HDAC3-204ENST00000469207 DPH5Q9H2P9 285 aa11.28□□□□□ -0.6
HDAC3-204ENST00000469207 ZNF703Q9H7S9 590 aaPredicted RBP11.28□□□□□ -0.6
HDAC3-204ENST00000469207 ZFP64Q9NPA5 681 aa11.28□□□□□ -0.6
HDAC3-204ENST00000469207 SAYSD1Q9NPB0 183 aa11.28□□□□□ -0.6
HDAC3-204ENST00000469207 RASSF1Q9NS23 344 aa11.28□□□□□ -0.6
HDAC3-204ENST00000469207 ST6GALNAC2Q9UJ37 374 aa11.28□□□□□ -0.6
HDAC3-204ENST00000469207 ERVK-19Q9WJR5 959 aa11.28□□□□□ -0.6
HDAC3-204ENST00000469207 CHCHD2Q9Y6H1 151 aaPredicted RBP11.28□□□□□ -0.6
HDAC3-204ENST00000469207 TCRBV9S1A1TA0A576 114 aa11.27□□□□□ -0.61
HDAC3-204ENST00000469207 SYT5O00445 386 aa11.27□□□□□ -0.61
HDAC3-204ENST00000469207 PLPP1O14494 284 aa11.27□□□□□ -0.61
HDAC3-204ENST00000469207 PROM1O43490 865 aa11.27□□□□□ -0.61
HDAC3-204ENST00000469207 HCN1O60741 890 aa11.27□□□□□ -0.61
HDAC3-204ENST00000469207 EEDO75530 441 aaKnown RBP11.27□□□□□ -0.61
HDAC3-204ENST00000469207 ACSL3O95573 720 aa11.27□□□□□ -0.61
HDAC3-204ENST00000469207 GBAP04062 536 aa11.27□□□□□ -0.61
HDAC3-204ENST00000469207 CLPSP04118 112 aa11.27□□□□□ -0.61
HDAC3-204ENST00000469207 ALOX15P16050 662 aaPredicted RBP11.27□□□□□ -0.61
HDAC3-204ENST00000469207 KLK2P20151 261 aa11.27□□□□□ -0.61
HDAC3-204ENST00000469207 HPDP32754 393 aaPredicted RBP11.27□□□□□ -0.61
HDAC3-204ENST00000469207 GPX6P59796 221 aa11.27□□□□□ -0.61
HDAC3-204ENST00000469207 RAB10P61026 200 aa11.27□□□□□ -0.61
HDAC3-204ENST00000469207 ATP6V0D1P61421 351 aa11.27□□□□□ -0.61
HDAC3-204ENST00000469207 RPS13P62277 151 aaKnown RBP11.27□□□□□ -0.61
HDAC3-204ENST00000469207 DUSP8Q13202 625 aa11.27□□□□□ -0.61
HDAC3-204ENST00000469207 E2F2Q14209 437 aa11.27□□□□□ -0.61
HDAC3-204ENST00000469207 TBCCQ15814 346 aa11.27□□□□□ -0.61
HDAC3-204ENST00000469207 PAGE2BQ5JRK9 111 aa11.27□□□□□ -0.61
HDAC3-204ENST00000469207 CDKL4Q5MAI5 379 aa11.27□□□□□ -0.61
HDAC3-204ENST00000469207 RIPPLY2Q5TAB7 128 aa11.27□□□□□ -0.61
HDAC3-204ENST00000469207 POMZP3Q6PJE2 187 aa11.27□□□□□ -0.61
HDAC3-204ENST00000469207 C3orf62Q6ZUJ4 267 aa11.27□□□□□ -0.61
HDAC3-204ENST00000469207 GPR180Q86V85 440 aa11.27□□□□□ -0.61
HDAC3-204ENST00000469207 CDC20BQ86Y33 519 aa11.27□□□□□ -0.61
HDAC3-204ENST00000469207 TGIF2LYQ8IUE0 185 aa11.27□□□□□ -0.61
HDAC3-204ENST00000469207 SRFBP1Q8NEF9 429 aaKnown RBP11.27□□□□□ -0.61
HDAC3-204ENST00000469207 HUS1BQ8NHY5 278 aa11.27□□□□□ -0.61
HDAC3-204ENST00000469207 NEIL3Q8TAT5 605 aa11.27□□□□□ -0.61
HDAC3-204ENST00000469207 CMTM7Q96FZ5 175 aa11.27□□□□□ -0.61
HDAC3-204ENST00000469207 FOXC2Q99958 501 aa11.27□□□□□ -0.61
HDAC3-204ENST00000469207 ROGDIQ9GZN7 287 aa11.27□□□□□ -0.61
HDAC3-204ENST00000469207 CXXC4Q9H2H0 198 aa11.27□□□□□ -0.61
HDAC3-204ENST00000469207 CLEC4MQ9H2X3 399 aaPredicted RBP11.27□□□□□ -0.61
HDAC3-204ENST00000469207 EPB41L4BQ9H329 900 aa11.27□□□□□ -0.61
HDAC3-204ENST00000469207 NSMCE4AQ9NXX6 385 aa11.27□□□□□ -0.61
HDAC3-204ENST00000469207 CNOT11Q9UKZ1 510 aaKnown RBP11.27□□□□□ -0.61
HDAC3-204ENST00000469207 SLC6A5Q9Y345 797 aa11.27□□□□□ -0.61
HDAC3-204ENST00000469207 SPACA6W5XKT8 324 aa11.27□□□□□ -0.61
HDAC3-204ENST00000469207 KIAA1549Q9HCM3 1950 aa11.27□□□□□ -0.61
HDAC3-204ENST00000469207 MPDZO75970 2070 aa11.26□□□□□ -0.61
HDAC3-204ENST00000469207 C15orf38-AP3S2A0A0A6YYH1 394 aa11.26□□□□□ -0.61
HDAC3-204ENST00000469207 IQANK1A0A1B0GTG1 560 aa11.26□□□□□ -0.61
HDAC3-204ENST00000469207 A0A1W2PR48 441 aa11.26□□□□□ -0.61
HDAC3-204ENST00000469207 FAM221AA4D161 298 aa11.26□□□□□ -0.61
HDAC3-204ENST00000469207 SUPT3HB4E1H0 165 aa11.26□□□□□ -0.61
HDAC3-204ENST00000469207 ZSCAN12O43309 604 aa11.26□□□□□ -0.61
HDAC3-204ENST00000469207 TMPRSS11DO60235 418 aa11.26□□□□□ -0.61
HDAC3-204ENST00000469207 SUPT3HO75486 399 aa11.26□□□□□ -0.61
HDAC3-204ENST00000469207 TRAPPC6AO75865 159 aa11.26□□□□□ -0.61
HDAC3-204ENST00000469207 SCELO95171 688 aa11.26□□□□□ -0.61
HDAC3-204ENST00000469207 S100BP04271 92 aaPredicted RBP11.26□□□□□ -0.61
HDAC3-204ENST00000469207 FBXO45P0C2W1 286 aa11.26□□□□□ -0.61
HDAC3-204ENST00000469207 MTHFD2P13995 350 aa11.26□□□□□ -0.61
HDAC3-204ENST00000469207 COX7A2P14406 83 aa11.26□□□□□ -0.61
HDAC3-204ENST00000469207 GABRA1P14867 456 aa11.26□□□□□ -0.61
HDAC3-204ENST00000469207 SSTR4P31391 388 aa11.26□□□□□ -0.61
HDAC3-204ENST00000469207 PIK3CGP48736 1102 aa11.26□□□□□ -0.61
HDAC3-204ENST00000469207 NEK2P51955 445 aa11.26□□□□□ -0.61
HDAC3-204ENST00000469207 SLC37A1P57057 533 aa11.26□□□□□ -0.61
HDAC3-204ENST00000469207 FBXW4P57775 412 aa11.26□□□□□ -0.61
HDAC3-204ENST00000469207 FOXD4Q12950 439 aaPredicted RBP11.26□□□□□ -0.61
HDAC3-204ENST00000469207 ZKSCAN8Q15776 578 aaPredicted RBP11.26□□□□□ -0.61
HDAC3-204ENST00000469207 SLC25A35Q3KQZ1 300 aa11.26□□□□□ -0.61
HDAC3-204ENST00000469207 TMEM35AQ53FP2 167 aa11.26□□□□□ -0.61
HDAC3-204ENST00000469207 DESI1Q6ICB0 168 aa11.26□□□□□ -0.61
HDAC3-204ENST00000469207 MYLK4Q86YV6 388 aaPredicted RBP11.26□□□□□ -0.61
HDAC3-204ENST00000469207 CTAGE3PQ8IX95 158 aa11.26□□□□□ -0.61
HDAC3-204ENST00000469207 LRRC25Q8N386 305 aaPredicted RBP11.26□□□□□ -0.61
HDAC3-204ENST00000469207 FBXW8Q8N3Y1 598 aa11.26□□□□□ -0.61
HDAC3-204ENST00000469207 TEX9Q8N6V9 391 aa11.26□□□□□ -0.61
HDAC3-204ENST00000469207 LINC01560Q8TB33 94 aa11.26□□□□□ -0.61
HDAC3-204ENST00000469207 SLC22A8Q8TCC7 542 aa11.26□□□□□ -0.61
HDAC3-204ENST00000469207 TANKQ92844 425 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms