RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 TRAPPC9Q96Q05 1148 aa9.63□□□□□ -0.87
MSH5-213ENST00000468136 NRTNQ99748 197 aa9.63□□□□□ -0.87
MSH5-213ENST00000468136 DUSP23Q9BVJ7 150 aa9.63□□□□□ -0.87
MSH5-213ENST00000468136 MIR1-1HGQ9H1L0 117 aa9.63□□□□□ -0.87
MSH5-213ENST00000468136 ANKHQ9HCJ1 492 aa9.63□□□□□ -0.87
MSH5-213ENST00000468136 ZCCHC3Q9NUD5 404 aaKnown RBP9.63□□□□□ -0.87
MSH5-213ENST00000468136 KCMF1Q9P0J7 381 aa9.63□□□□□ -0.87
MSH5-213ENST00000468136 FBXW2Q9UKT8 454 aa9.63□□□□□ -0.87
MSH5-213ENST00000468136 MRPS33Q9Y291 106 aaKnown RBP9.63□□□□□ -0.87
MSH5-213ENST00000468136 FAM32AQ9Y421 112 aaKnown RBP9.63□□□□□ -0.87
MSH5-213ENST00000468136 MAP4K5Q9Y4K4 846 aa9.63□□□□□ -0.87
MSH5-213ENST00000468136 HSPE1-MOB4S4R3N1 261 aa9.63□□□□□ -0.87
MSH5-213ENST00000468136 ARHGEF17Q96PE2 2063 aaPredicted RBP9.63□□□□□ -0.87
MSH5-213ENST00000468136 A0A087WV62 115 aa9.62□□□□□ -0.87
MSH5-213ENST00000468136 A0A0G2JPF8 293 aa9.62□□□□□ -0.87
MSH5-213ENST00000468136 FAM149AA5PLN7 773 aa9.62□□□□□ -0.87
MSH5-213ENST00000468136 TTC36A6NLP5 189 aa9.62□□□□□ -0.87
MSH5-213ENST00000468136 RHPN2P1A8MT19 583 aa9.62□□□□□ -0.87
MSH5-213ENST00000468136 HNRNPCL2B2RXH8 293 aa9.62□□□□□ -0.87
MSH5-213ENST00000468136 HNRNPCL3B7ZW38 293 aa9.62□□□□□ -0.87
MSH5-213ENST00000468136 M0QX08 132 aa9.62□□□□□ -0.87
MSH5-213ENST00000468136 GALR3O60755 368 aaPredicted RBP9.62□□□□□ -0.87
MSH5-213ENST00000468136 ERAL1O75616 437 aaKnown RBP9.62□□□□□ -0.87
MSH5-213ENST00000468136 AK1P00568 194 aa9.62□□□□□ -0.87
MSH5-213ENST00000468136 TFPTP0C1Z6 253 aa9.62□□□□□ -0.87
MSH5-213ENST00000468136 HNRNPCL4P0DMR1 293 aa9.62□□□□□ -0.87
MSH5-213ENST00000468136 ALPPL2P10696 532 aa9.62□□□□□ -0.87
MSH5-213ENST00000468136 PNLIPP16233 465 aa9.62□□□□□ -0.87
MSH5-213ENST00000468136 MATN1P21941 496 aa9.62□□□□□ -0.87
MSH5-213ENST00000468136 SOX11P35716 441 aa9.62□□□□□ -0.87
MSH5-213ENST00000468136 DCTP40126 519 aa9.62□□□□□ -0.87
MSH5-213ENST00000468136 CRISP3P54108 245 aa9.62□□□□□ -0.87
MSH5-213ENST00000468136 LIM2P55344 173 aa9.62□□□□□ -0.87
MSH5-213ENST00000468136 RAB38P57729 211 aa9.62□□□□□ -0.87
MSH5-213ENST00000468136 TUBA4AP68366 448 aa9.62□□□□□ -0.87
MSH5-213ENST00000468136 ZXDAP98168 799 aa9.62□□□□□ -0.87
MSH5-213ENST00000468136 PPP2R2BQ00005 443 aa9.62□□□□□ -0.87
MSH5-213ENST00000468136 SIGLEC14Q08ET2 396 aa9.62□□□□□ -0.87
MSH5-213ENST00000468136 NR1D2Q14995 579 aa9.62□□□□□ -0.87
MSH5-213ENST00000468136 PRTGQ2VWP7 1150 aa9.62□□□□□ -0.87
MSH5-213ENST00000468136 INAVAQ3KP66 663 aa9.62□□□□□ -0.87
MSH5-213ENST00000468136 KCTD21Q4G0X4 260 aa9.62□□□□□ -0.87
MSH5-213ENST00000468136 C6orf132Q5T0Z8 1188 aa9.62□□□□□ -0.87
MSH5-213ENST00000468136 ATAD3BQ5T9A4 648 aa9.62□□□□□ -0.87
MSH5-213ENST00000468136 YOD1Q5VVQ6 348 aaPredicted RBP9.62□□□□□ -0.87
MSH5-213ENST00000468136 LYSMD4Q5XG99 296 aa9.62□□□□□ -0.87
MSH5-213ENST00000468136 ZNF438Q7Z4V0 828 aa9.62□□□□□ -0.87
MSH5-213ENST00000468136 TRIM73Q86UV7 250 aa9.62□□□□□ -0.87
MSH5-213ENST00000468136 CYP4Z1Q86W10 505 aa9.62□□□□□ -0.87
MSH5-213ENST00000468136 PLXDC1Q8IUK5 500 aa9.62□□□□□ -0.87
MSH5-213ENST00000468136 MCATQ8IVS2 390 aaKnown RBP9.62□□□□□ -0.87
MSH5-213ENST00000468136 FAM20CQ8IXL6 584 aa9.62□□□□□ -0.87
MSH5-213ENST00000468136 LGI4Q8N135 537 aa9.62□□□□□ -0.87
MSH5-213ENST00000468136 DNAJC22Q8N4W6 341 aa9.62□□□□□ -0.87
MSH5-213ENST00000468136 ARL10Q8N8L6 244 aa9.62□□□□□ -0.87
MSH5-213ENST00000468136 KCT2Q8NC54 265 aa9.62□□□□□ -0.87
MSH5-213ENST00000468136 NFKBIDQ8NI38 313 aa9.62□□□□□ -0.87
MSH5-213ENST00000468136 MAGEE2Q8TD90 523 aaPredicted RBP9.62□□□□□ -0.87
MSH5-213ENST00000468136 PATE1Q8WXA2 126 aa9.62□□□□□ -0.87
MSH5-213ENST00000468136 JPH3Q8WXH2 748 aaPredicted RBP9.62□□□□□ -0.87
MSH5-213ENST00000468136 ZNF681Q96N22 645 aa9.62□□□□□ -0.87
MSH5-213ENST00000468136 DPYSL5Q9BPU6 564 aa9.62□□□□□ -0.87
MSH5-213ENST00000468136 PELOQ9BRX2 385 aaKnown RBP9.62□□□□□ -0.87
MSH5-213ENST00000468136 MRPS26Q9BYN8 205 aaKnown RBP9.62□□□□□ -0.87
MSH5-213ENST00000468136 RUBCNLQ9H714 662 aa9.62□□□□□ -0.87
MSH5-213ENST00000468136 CAAP1Q9H8G2 361 aa9.62□□□□□ -0.87
MSH5-213ENST00000468136 CACYBPQ9HB71 228 aaKnown RBP9.62□□□□□ -0.87
MSH5-213ENST00000468136 SLAMF7Q9NQ25 335 aa9.62□□□□□ -0.87
MSH5-213ENST00000468136 PRMT8Q9NR22 394 aaPredicted RBP9.62□□□□□ -0.87
MSH5-213ENST00000468136 EXD2Q9NVH0 621 aa9.62□□□□□ -0.87
MSH5-213ENST00000468136 GIN1Q9NXP7 522 aa9.62□□□□□ -0.87
MSH5-213ENST00000468136 TUBA8Q9NY65 449 aaPredicted RBP9.62□□□□□ -0.87
MSH5-213ENST00000468136 PLCL2Q9UPR0 1127 aa9.62□□□□□ -0.87
MSH5-213ENST00000468136 MYRFQ9Y2G1 1151 aa9.62□□□□□ -0.87
MSH5-213ENST00000468136 V9GYQ6 96 aa9.62□□□□□ -0.87
MSH5-213ENST00000468136 FANCMQ8IYD8 2048 aa9.61□□□□□ -0.87
MSH5-213ENST00000468136 ARRDC5A6NEK1 342 aa9.61□□□□□ -0.87
MSH5-213ENST00000468136 A6NHS1 94 aa9.61□□□□□ -0.87
MSH5-213ENST00000468136 PGRMC2O15173 223 aa9.61□□□□□ -0.87
MSH5-213ENST00000468136 CASC3O15234 703 aaKnown RBP9.61□□□□□ -0.87
MSH5-213ENST00000468136 PPM1DO15297 605 aa9.61□□□□□ -0.87
MSH5-213ENST00000468136 TOX3O15405 576 aaPredicted RBP9.61□□□□□ -0.87
MSH5-213ENST00000468136 UGT2B11O75310 529 aa9.61□□□□□ -0.87
MSH5-213ENST00000468136 DNAJB5O75953 348 aa9.61□□□□□ -0.87
MSH5-213ENST00000468136 PGM3O95394 542 aa9.61□□□□□ -0.87
MSH5-213ENST00000468136 H6PDO95479 791 aa9.61□□□□□ -0.87
MSH5-213ENST00000468136 ZBTB11O95625 1053 aaPredicted RBP9.61□□□□□ -0.87
MSH5-213ENST00000468136 C9P02748 559 aa9.61□□□□□ -0.87
MSH5-213ENST00000468136 CELA2BP08218 269 aaPredicted RBP9.61□□□□□ -0.87
MSH5-213ENST00000468136 GUSBP08236 651 aa9.61□□□□□ -0.87
MSH5-213ENST00000468136 MSL3P1P0C860 447 aa9.61□□□□□ -0.87
MSH5-213ENST00000468136 GLB1P16278 677 aa9.61□□□□□ -0.87
MSH5-213ENST00000468136 PORP16435 677 aaPredicted RBP9.61□□□□□ -0.87
MSH5-213ENST00000468136 RHCEP18577 417 aa9.61□□□□□ -0.87
MSH5-213ENST00000468136 EFNA1P20827 205 aaPredicted RBP9.61□□□□□ -0.87
MSH5-213ENST00000468136 CNR2P34972 360 aa9.61□□□□□ -0.87
MSH5-213ENST00000468136 CTSKP43235 329 aa9.61□□□□□ -0.87
MSH5-213ENST00000468136 CDK9P50750 372 aaKnown RBP9.61□□□□□ -0.87
MSH5-213ENST00000468136 KCNJ10P78508 379 aa9.61□□□□□ -0.87
MSH5-213ENST00000468136 TOP3AQ13472 1001 aaPredicted RBP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms