RNA–Protein interactions for RNA: ENST00000467553.2

CCHCR1-211, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 589 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-211ENST00000467553 GABRR3A8MPY1 467 aa13.09□□□□□ -0.31
CCHCR1-211ENST00000467553 MANBAO00462 879 aa13.09□□□□□ -0.31
CCHCR1-211ENST00000467553 PROM1O43490 865 aa13.09□□□□□ -0.31
CCHCR1-211ENST00000467553 TMPRSS11DO60235 418 aa13.09□□□□□ -0.31
CCHCR1-211ENST00000467553 MAN1A2O60476 641 aa13.09□□□□□ -0.31
CCHCR1-211ENST00000467553 SPAG7O75391 227 aa13.09□□□□□ -0.31
CCHCR1-211ENST00000467553 PRKRAO75569 313 aaKnown RBP13.09□□□□□ -0.31
CCHCR1-211ENST00000467553 KRT6AP02538 564 aa13.09□□□□□ -0.31
CCHCR1-211ENST00000467553 KRT6BP04259 564 aa13.09□□□□□ -0.31
CCHCR1-211ENST00000467553 SP1P08047 785 aa13.09□□□□□ -0.31
CCHCR1-211ENST00000467553 ESRRAP11474 423 aaPredicted RBP13.09□□□□□ -0.31
CCHCR1-211ENST00000467553 KRT6CP48668 564 aa13.09□□□□□ -0.31
CCHCR1-211ENST00000467553 CLCN2P51788 898 aa13.09□□□□□ -0.31
CCHCR1-211ENST00000467553 NAGLUP54802 743 aa13.09□□□□□ -0.31
CCHCR1-211ENST00000467553 ALDH6A1Q02252 535 aaKnown RBP13.09□□□□□ -0.31
CCHCR1-211ENST00000467553 LCP2Q13094 533 aa13.09□□□□□ -0.31
CCHCR1-211ENST00000467553 SERTAD2Q14140 314 aa13.09□□□□□ -0.31
CCHCR1-211ENST00000467553 ZNF630Q2M218 657 aaPredicted RBP13.09□□□□□ -0.31
CCHCR1-211ENST00000467553 CFAP157Q5JU67 520 aa13.09□□□□□ -0.31
CCHCR1-211ENST00000467553 C10orf62Q5T681 223 aaPredicted RBP13.09□□□□□ -0.31
CCHCR1-211ENST00000467553 MRM1Q6IN84 353 aaKnown RBP13.09□□□□□ -0.31
CCHCR1-211ENST00000467553 SLC25A25Q6KCM7 469 aa13.09□□□□□ -0.31
CCHCR1-211ENST00000467553 PAGE2Q7Z2X7 111 aa13.09□□□□□ -0.31
CCHCR1-211ENST00000467553 TRABD2AQ86V40 505 aa13.09□□□□□ -0.31
CCHCR1-211ENST00000467553 SRRM1Q8IYB3 904 aaKnown RBP13.09□□□□□ -0.31
CCHCR1-211ENST00000467553 ARMC10Q8N2F6 343 aa13.09□□□□□ -0.31
CCHCR1-211ENST00000467553 POGLUT1Q8NBL1 392 aa13.09□□□□□ -0.31
CCHCR1-211ENST00000467553 TANKQ92844 425 aa13.09□□□□□ -0.31
CCHCR1-211ENST00000467553 NCLNQ969V3 563 aa13.09□□□□□ -0.31
CCHCR1-211ENST00000467553 PPWD1Q96BP3 646 aaKnown RBP13.09□□□□□ -0.31
CCHCR1-211ENST00000467553 MAGED4Q96JG8 741 aa13.09□□□□□ -0.31
CCHCR1-211ENST00000467553 SIGLEC12Q96PQ1 595 aa13.09□□□□□ -0.31
CCHCR1-211ENST00000467553 MID1IP1Q9NPA3 183 aa13.09□□□□□ -0.31
CCHCR1-211ENST00000467553 NMRK1Q9NWW6 199 aa13.09□□□□□ -0.31
CCHCR1-211ENST00000467553 ANKRD10Q9NXR5 420 aa13.09□□□□□ -0.31
CCHCR1-211ENST00000467553 VTI1BQ9UEU0 232 aa13.09□□□□□ -0.31
CCHCR1-211ENST00000467553 STK38LQ9Y2H1 464 aa13.09□□□□□ -0.31
CCHCR1-211ENST00000467553 ASB4Q9Y574 426 aa13.09□□□□□ -0.31
CCHCR1-211ENST00000467553 TIMM22Q9Y584 194 aa13.09□□□□□ -0.31
CCHCR1-211ENST00000467553 GLOD5A6NK44 160 aa13.08□□□□□ -0.32
CCHCR1-211ENST00000467553 C17orf105B2RV13 164 aa13.08□□□□□ -0.32
CCHCR1-211ENST00000467553 FCHO1O14526 889 aa13.08□□□□□ -0.32
CCHCR1-211ENST00000467553 FGF17O60258 216 aa13.08□□□□□ -0.32
CCHCR1-211ENST00000467553 ULK1O75385 1050 aa13.08□□□□□ -0.32
CCHCR1-211ENST00000467553 SEMA3DO95025 777 aa13.08□□□□□ -0.32
CCHCR1-211ENST00000467553 ELAVL4P26378 380 aaKnown RBP13.08□□□□□ -0.32
CCHCR1-211ENST00000467553 TRHRP34981 398 aaPredicted RBP13.08□□□□□ -0.32
CCHCR1-211ENST00000467553 PKNOX1P55347 436 aa13.08□□□□□ -0.32
CCHCR1-211ENST00000467553 TNFRSF17Q02223 184 aa13.08□□□□□ -0.32
CCHCR1-211ENST00000467553 OC90Q02509 493 aaPredicted RBP13.08□□□□□ -0.32
CCHCR1-211ENST00000467553 FOLH1Q04609 750 aa13.08□□□□□ -0.32
CCHCR1-211ENST00000467553 TERF2Q15554 542 aa13.08□□□□□ -0.32
CCHCR1-211ENST00000467553 ELAVL1Q15717 326 aaKnown RBP13.08□□□□□ -0.32
CCHCR1-211ENST00000467553 CCNYL2Q5T2Q4 361 aa13.08□□□□□ -0.32
CCHCR1-211ENST00000467553 SCIMPQ6UWF3 145 aa13.08□□□□□ -0.32
CCHCR1-211ENST00000467553 SPPL2CQ8IUH8 684 aa13.08□□□□□ -0.32
CCHCR1-211ENST00000467553 MCEMP1Q8IX19 187 aa13.08□□□□□ -0.32
CCHCR1-211ENST00000467553 METTL4Q8N3J2 472 aa13.08□□□□□ -0.32
CCHCR1-211ENST00000467553 APCDD1LQ8NCL9 501 aa13.08□□□□□ -0.32
CCHCR1-211ENST00000467553 RDH11Q8TC12 318 aa13.08□□□□□ -0.32
CCHCR1-211ENST00000467553 PTPMT1Q8WUK0 201 aaPredicted RBP13.08□□□□□ -0.32
CCHCR1-211ENST00000467553 SREK1Q8WXA9 508 aaKnown RBP13.08□□□□□ -0.32
CCHCR1-211ENST00000467553 DAZLQ92904 295 aaKnown RBP13.08□□□□□ -0.32
CCHCR1-211ENST00000467553 UCN3Q969E3 161 aa13.08□□□□□ -0.32
CCHCR1-211ENST00000467553 ZBTB9Q96C00 473 aa13.08□□□□□ -0.32
CCHCR1-211ENST00000467553 VMP1Q96GC9 406 aa13.08□□□□□ -0.32
CCHCR1-211ENST00000467553 RBM18Q96H35 190 aaKnown RBP13.08□□□□□ -0.32
CCHCR1-211ENST00000467553 KCNA7Q96RP8 456 aa13.08□□□□□ -0.32
CCHCR1-211ENST00000467553 OR8D2Q9GZM6 311 aa13.08□□□□□ -0.32
CCHCR1-211ENST00000467553 GSTO2Q9H4Y5 243 aa13.08□□□□□ -0.32
CCHCR1-211ENST00000467553 WDR41Q9HAD4 459 aa13.08□□□□□ -0.32
CCHCR1-211ENST00000467553 BRF2Q9HAW0 419 aa13.08□□□□□ -0.32
CCHCR1-211ENST00000467553 OXSMQ9NWU1 459 aa13.08□□□□□ -0.32
CCHCR1-211ENST00000467553 LRFN1Q9P244 771 aa13.08□□□□□ -0.32
CCHCR1-211ENST00000467553 LGALS13Q9UHV8 139 aa13.08□□□□□ -0.32
CCHCR1-211ENST00000467553 RAB21Q9UL25 225 aa13.08□□□□□ -0.32
CCHCR1-211ENST00000467553 PLLPQ9Y342 182 aa13.08□□□□□ -0.32
CCHCR1-211ENST00000467553 GTF3C1Q12789 2109 aa13.07□□□□□ -0.32
CCHCR1-211ENST00000467553 NEURL1O76050 574 aa13.07□□□□□ -0.32
CCHCR1-211ENST00000467553 ESRRBO95718 433 aa13.07□□□□□ -0.32
CCHCR1-211ENST00000467553 CHN1P15882 459 aa13.07□□□□□ -0.32
CCHCR1-211ENST00000467553 HTR1EP28566 365 aa13.07□□□□□ -0.32
CCHCR1-211ENST00000467553 TPP2P29144 1249 aaPredicted RBP13.07□□□□□ -0.32
CCHCR1-211ENST00000467553 CYB561P49447 251 aa13.07□□□□□ -0.32
CCHCR1-211ENST00000467553 GPR143P51810 404 aa13.07□□□□□ -0.32
CCHCR1-211ENST00000467553 DNAJB13P59910 316 aa13.07□□□□□ -0.32
CCHCR1-211ENST00000467553 BTKQ06187 659 aa13.07□□□□□ -0.32
CCHCR1-211ENST00000467553 BIKQ13323 160 aa13.07□□□□□ -0.32
CCHCR1-211ENST00000467553 SPINK14Q6IE38 97 aa13.07□□□□□ -0.32
CCHCR1-211ENST00000467553 GDF7Q7Z4P5 450 aa13.07□□□□□ -0.32
CCHCR1-211ENST00000467553 C10orf107Q8IVU9 208 aa13.07□□□□□ -0.32
CCHCR1-211ENST00000467553 GHDCQ8N2G8 530 aa13.07□□□□□ -0.32
CCHCR1-211ENST00000467553 MREGQ8N565 214 aa13.07□□□□□ -0.32
CCHCR1-211ENST00000467553 BANPQ8N9N5 519 aa13.07□□□□□ -0.32
CCHCR1-211ENST00000467553 MORN4Q8NDC4 146 aa13.07□□□□□ -0.32
CCHCR1-211ENST00000467553 C7orf57Q8NEG2 295 aa13.07□□□□□ -0.32
CCHCR1-211ENST00000467553 OR14A16Q8NHC5 309 aa13.07□□□□□ -0.32
CCHCR1-211ENST00000467553 DOK4Q8TEW6 326 aa13.07□□□□□ -0.32
CCHCR1-211ENST00000467553 TMEM125Q96AQ2 219 aa13.07□□□□□ -0.32
CCHCR1-211ENST00000467553 APOPT1Q96IL0 206 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms