RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 RBPJQ06330 500 aa2.77□□□□□ -1.97
XRN1-206ENST00000467077 KLRC3Q07444 240 aa2.77□□□□□ -1.97
XRN1-206ENST00000467077 ACSM1Q08AH1 577 aa2.77□□□□□ -1.97
XRN1-206ENST00000467077 TRAP1Q12931 704 aaKnown RBP2.77□□□□□ -1.97
XRN1-206ENST00000467077 TRIM29Q14134 588 aa2.77□□□□□ -1.97
XRN1-206ENST00000467077 PTPN14Q15678 1187 aa2.77□□□□□ -1.97
XRN1-206ENST00000467077 FAM133BQ5BKY9 247 aaKnown RBP2.77□□□□□ -1.97
XRN1-206ENST00000467077 ARMC3Q5W041 872 aa2.77□□□□□ -1.97
XRN1-206ENST00000467077 NHLRC1Q6VVB1 395 aa2.77□□□□□ -1.97
XRN1-206ENST00000467077 ZBTB49Q6ZSB9 765 aa2.77□□□□□ -1.97
XRN1-206ENST00000467077 DET1Q7L5Y6 550 aa2.77□□□□□ -1.97
XRN1-206ENST00000467077 CCDC186Q7Z3E2 898 aa2.77□□□□□ -1.97
XRN1-206ENST00000467077 SLFN11Q7Z7L1 901 aa2.77□□□□□ -1.97
XRN1-206ENST00000467077 MYOCDQ8IZQ8 938 aa2.77□□□□□ -1.97
XRN1-206ENST00000467077 FAM133AQ8N9E0 248 aa2.77□□□□□ -1.97
XRN1-206ENST00000467077 OR5T2Q8NGG2 359 aa2.77□□□□□ -1.97
XRN1-206ENST00000467077 AFAP1L1Q8TED9 768 aa2.77□□□□□ -1.97
XRN1-206ENST00000467077 ATP8B4Q8TF62 1192 aa2.77□□□□□ -1.97
XRN1-206ENST00000467077 LRRC15Q8TF66 581 aa2.77□□□□□ -1.97
XRN1-206ENST00000467077 SLC45A3Q96JT2 553 aa2.77□□□□□ -1.97
XRN1-206ENST00000467077 B3GALT6Q96L58 329 aa2.77□□□□□ -1.97
XRN1-206ENST00000467077 C2orf48Q96LS8 159 aa2.77□□□□□ -1.97
XRN1-206ENST00000467077 FER1L6-AS2Q96M78 137 aa2.77□□□□□ -1.97
XRN1-206ENST00000467077 FAM218AQ96MZ4 157 aa2.77□□□□□ -1.97
XRN1-206ENST00000467077 MUS81Q96NY9 551 aa2.77□□□□□ -1.97
XRN1-206ENST00000467077 FEVQ99581 238 aa2.77□□□□□ -1.97
XRN1-206ENST00000467077 OVOL2Q9BRP0 275 aa2.77□□□□□ -1.97
XRN1-206ENST00000467077 RIOK1Q9BRS2 568 aaKnown RBP2.77□□□□□ -1.97
XRN1-206ENST00000467077 TDRD1Q9BXT4 1180 aaKnown RBP2.77□□□□□ -1.97
XRN1-206ENST00000467077 SLC2A11Q9BYW1 496 aa2.77□□□□□ -1.97
XRN1-206ENST00000467077 API5Q9BZZ5 524 aaKnown RBP2.77□□□□□ -1.97
XRN1-206ENST00000467077 B3GAT2Q9NPZ5 323 aa2.77□□□□□ -1.97
XRN1-206ENST00000467077 VSIG4Q9Y279 399 aa2.77□□□□□ -1.97
XRN1-206ENST00000467077 Q9Y3F1 56 aa2.77□□□□□ -1.97
XRN1-206ENST00000467077 KIF25-AS1Q9Y6Z4 181 aa2.77□□□□□ -1.97
XRN1-206ENST00000467077 TECTAO75443 2155 aa2.77□□□□□ -1.97
XRN1-206ENST00000467077 ASPMQ8IZT6 3477 aa2.77□□□□□ -1.97
XRN1-206ENST00000467077 ZNF532Q9HCE3 1301 aa2.76□□□□□ -1.97
XRN1-206ENST00000467077 C2CD4DB7Z1M9 353 aa2.76□□□□□ -1.97
XRN1-206ENST00000467077 PRKAB2O43741 272 aa2.76□□□□□ -1.97
XRN1-206ENST00000467077 SURF6O75683 361 aaKnown RBP2.76□□□□□ -1.97
XRN1-206ENST00000467077 ATP6AP2O75787 350 aa2.76□□□□□ -1.97
XRN1-206ENST00000467077 RECQL5O94762 991 aaPredicted RBP2.76□□□□□ -1.97
XRN1-206ENST00000467077 HSPA4LO95757 839 aa2.76□□□□□ -1.97
XRN1-206ENST00000467077 NDUFB10O96000 172 aa2.76□□□□□ -1.97
XRN1-206ENST00000467077 PDGFBP01127 241 aaPredicted RBP2.76□□□□□ -1.97
XRN1-206ENST00000467077 QDPRP09417 244 aa2.76□□□□□ -1.97
XRN1-206ENST00000467077 THEGLP0DJG4 465 aa2.76□□□□□ -1.97
XRN1-206ENST00000467077 IL4RP24394 825 aa2.76□□□□□ -1.97
XRN1-206ENST00000467077 ELAVL4P26378 380 aaKnown RBP2.76□□□□□ -1.97
XRN1-206ENST00000467077 PDHA2P29803 388 aa2.76□□□□□ -1.97
XRN1-206ENST00000467077 CTNNB1P35222 781 aa2.76□□□□□ -1.97
XRN1-206ENST00000467077 NBL1P41271 181 aa2.76□□□□□ -1.97
XRN1-206ENST00000467077 LIMK1P53667 647 aa2.76□□□□□ -1.97
XRN1-206ENST00000467077 SNAP25P60880 206 aa2.76□□□□□ -1.97
XRN1-206ENST00000467077 SIGLEC14Q08ET2 396 aa2.76□□□□□ -1.97
XRN1-206ENST00000467077 SGCGQ13326 291 aa2.76□□□□□ -1.97
XRN1-206ENST00000467077 GPNMBQ14956 572 aa2.76□□□□□ -1.97
XRN1-206ENST00000467077 PSMD6Q15008 389 aa2.76□□□□□ -1.97
XRN1-206ENST00000467077 ALDH1L2Q3SY69 923 aa2.76□□□□□ -1.97
XRN1-206ENST00000467077 C12orf60Q5U649 245 aa2.76□□□□□ -1.97
XRN1-206ENST00000467077 RSBN1Q5VWQ0 802 aaPredicted RBP2.76□□□□□ -1.97
XRN1-206ENST00000467077 KRT39Q6A163 491 aa2.76□□□□□ -1.97
XRN1-206ENST00000467077 GDPGP1Q6ZNW5 385 aa2.76□□□□□ -1.97
XRN1-206ENST00000467077 FCRLAQ7L513 359 aa2.76□□□□□ -1.97
XRN1-206ENST00000467077 ZER1Q7Z7L7 766 aa2.76□□□□□ -1.97
XRN1-206ENST00000467077 FAM9BQ8IZU0 186 aa2.76□□□□□ -1.97
XRN1-206ENST00000467077 METTL4Q8N3J2 472 aa2.76□□□□□ -1.97
XRN1-206ENST00000467077 RYBPQ8N488 228 aaPredicted RBP2.76□□□□□ -1.97
XRN1-206ENST00000467077 FAM89BQ8N5H3 189 aa2.76□□□□□ -1.97
XRN1-206ENST00000467077 RASGEF1AQ8N9B8 481 aa2.76□□□□□ -1.97
XRN1-206ENST00000467077 SUMF1Q8NBK3 374 aa2.76□□□□□ -1.97
XRN1-206ENST00000467077 NOA1Q8NC60 698 aaKnown RBP2.76□□□□□ -1.97
XRN1-206ENST00000467077 CAMKVQ8NCB2 501 aa2.76□□□□□ -1.97
XRN1-206ENST00000467077 PIK3R3Q92569 461 aa2.76□□□□□ -1.97
XRN1-206ENST00000467077 CNRIP1Q96F85 164 aaPredicted RBP2.76□□□□□ -1.97
XRN1-206ENST00000467077 SIPA1Q96FS4 1042 aa2.76□□□□□ -1.97
XRN1-206ENST00000467077 OTUB1Q96FW1 271 aaPredicted RBP2.76□□□□□ -1.97
XRN1-206ENST00000467077 ATXN7L3BQ96GX2 97 aa2.76□□□□□ -1.97
XRN1-206ENST00000467077 RPGRIP1Q96KN7 1286 aa2.76□□□□□ -1.97
XRN1-206ENST00000467077 ZNF558Q96NG5 402 aa2.76□□□□□ -1.97
XRN1-206ENST00000467077 SLC25A23Q9BV35 468 aa2.76□□□□□ -1.97
XRN1-206ENST00000467077 SLC38A10Q9HBR0 1119 aa2.76□□□□□ -1.97
XRN1-206ENST00000467077 GSN-AS1Q9NRJ2 163 aa2.76□□□□□ -1.97
XRN1-206ENST00000467077 CYP39A1Q9NYL5 469 aa2.76□□□□□ -1.97
XRN1-206ENST00000467077 MYO10Q9HD67 2058 aa2.76□□□□□ -1.97
XRN1-206ENST00000467077 BRWD1Q9NSI6 2320 aa2.75□□□□□ -1.97
XRN1-206ENST00000467077 FANCMQ8IYD8 2048 aa2.75□□□□□ -1.97
XRN1-206ENST00000467077 KMT2BQ9UMN6 2715 aaPredicted RBP2.75□□□□□ -1.97
XRN1-206ENST00000467077 NBEAQ8NFP9 2946 aa2.75□□□□□ -1.97
XRN1-206ENST00000467077 RSPH10B2B2RC85 870 aa2.75□□□□□ -1.97
XRN1-206ENST00000467077 LOC730098B7Z3J9 87 aa2.75□□□□□ -1.97
XRN1-206ENST00000467077 CCL24O00175 119 aa2.75□□□□□ -1.97
XRN1-206ENST00000467077 CLDN4O14493 209 aa2.75□□□□□ -1.97
XRN1-206ENST00000467077 TFECO14948 347 aaPredicted RBP2.75□□□□□ -1.97
XRN1-206ENST00000467077 SNX3O60493 162 aa2.75□□□□□ -1.97
XRN1-206ENST00000467077 CXCL10P02778 98 aa2.75□□□□□ -1.97
XRN1-206ENST00000467077 RSPH10BP0C881 870 aa2.75□□□□□ -1.97
XRN1-206ENST00000467077 PTAFRP25105 342 aa2.75□□□□□ -1.97
XRN1-206ENST00000467077 AZGP1P25311 298 aaKnown RBP2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms