RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 BCKDKO14874 412 aa17.69■□□□□ 0.42
COL9A3-206ENST00000466532 PRKRAO75569 313 aaKnown RBP17.69■□□□□ 0.42
COL9A3-206ENST00000466532 ATP6AP2O75787 350 aa17.69■□□□□ 0.42
COL9A3-206ENST00000466532 C2P06681 752 aa17.69■□□□□ 0.42
COL9A3-206ENST00000466532 ALOX15P16050 662 aaPredicted RBP17.69■□□□□ 0.42
COL9A3-206ENST00000466532 TLX1P31314 330 aaPredicted RBP17.69■□□□□ 0.42
COL9A3-206ENST00000466532 RPS13P62277 151 aaKnown RBP17.69■□□□□ 0.42
COL9A3-206ENST00000466532 FOXO1Q12778 655 aa17.69■□□□□ 0.42
COL9A3-206ENST00000466532 PFKFB4Q16877 469 aa17.69■□□□□ 0.42
COL9A3-206ENST00000466532 FAM83EQ2M2I3 478 aa17.69■□□□□ 0.42
COL9A3-206ENST00000466532 HYAL4Q2M3T9 481 aa17.69■□□□□ 0.42
COL9A3-206ENST00000466532 MROH9Q5TGP6 573 aa17.69■□□□□ 0.42
COL9A3-206ENST00000466532 LIPJQ5W064 366 aa17.69■□□□□ 0.42
COL9A3-206ENST00000466532 TRILQ7L0X0 811 aa17.69■□□□□ 0.42
COL9A3-206ENST00000466532 ZCCHC7Q8N3Z6 543 aaKnown RBP17.69■□□□□ 0.42
COL9A3-206ENST00000466532 DOK4Q8TEW6 326 aa17.69■□□□□ 0.42
COL9A3-206ENST00000466532 MRRFQ96E11 262 aaKnown RBP17.69■□□□□ 0.42
COL9A3-206ENST00000466532 FBXL20Q96IG2 436 aa17.69■□□□□ 0.42
COL9A3-206ENST00000466532 ACTR8Q9H981 624 aa17.69■□□□□ 0.42
COL9A3-206ENST00000466532 KCNJ16Q9NPI9 418 aa17.69■□□□□ 0.42
COL9A3-206ENST00000466532 NPDC1Q9NQX5 325 aaPredicted RBP17.69■□□□□ 0.42
COL9A3-206ENST00000466532 TSC22D4Q9Y3Q8 395 aa17.69■□□□□ 0.42
COL9A3-206ENST00000466532 MED13LQ71F56 2210 aa17.68■□□□□ 0.42
COL9A3-206ENST00000466532 A0A1B0GVC2 190 aa17.68■□□□□ 0.42
COL9A3-206ENST00000466532 FIGNL2A6NMB9 653 aa17.68■□□□□ 0.42
COL9A3-206ENST00000466532 AQP7O14520 342 aa17.68■□□□□ 0.42
COL9A3-206ENST00000466532 TOXO94900 526 aa17.68■□□□□ 0.42
COL9A3-206ENST00000466532 CELA3AP09093 270 aa17.68■□□□□ 0.42
COL9A3-206ENST00000466532 IGFBP2P18065 325 aa17.68■□□□□ 0.42
COL9A3-206ENST00000466532 PTX3P26022 381 aaPredicted RBP17.68■□□□□ 0.42
COL9A3-206ENST00000466532 ACVR2AP27037 513 aa17.68■□□□□ 0.42
COL9A3-206ENST00000466532 PIGAP37287 484 aa17.68■□□□□ 0.42
COL9A3-206ENST00000466532 BUD31P41223 144 aaPredicted RBP17.68■□□□□ 0.42
COL9A3-206ENST00000466532 MAN2A2P49641 1150 aa17.68■□□□□ 0.42
COL9A3-206ENST00000466532 ARFIP1P53367 373 aa17.68■□□□□ 0.42
COL9A3-206ENST00000466532 ALDH18A1P54886 795 aaKnown RBP17.68■□□□□ 0.42
COL9A3-206ENST00000466532 PHEXP78562 749 aa17.68■□□□□ 0.42
COL9A3-206ENST00000466532 GUCY2DQ02846 1103 aa17.68■□□□□ 0.42
COL9A3-206ENST00000466532 TFF3Q07654 80 aa17.68■□□□□ 0.42
COL9A3-206ENST00000466532 ZNF791Q3KP31 576 aaPredicted RBP17.68■□□□□ 0.42
COL9A3-206ENST00000466532 SLC22A10Q63ZE4 541 aa17.68■□□□□ 0.42
COL9A3-206ENST00000466532 CCDC91Q7Z6B0 441 aa17.68■□□□□ 0.42
COL9A3-206ENST00000466532 CDH24Q86UP0 819 aa17.68■□□□□ 0.42
COL9A3-206ENST00000466532 ST13P4Q8IZP2 240 aaPredicted RBP17.68■□□□□ 0.42
COL9A3-206ENST00000466532 OR10Q1Q8NGQ4 319 aa17.68■□□□□ 0.42
COL9A3-206ENST00000466532 REPS1Q96D71 796 aa17.68■□□□□ 0.42
COL9A3-206ENST00000466532 SPACA9Q96E40 222 aaPredicted RBP17.68■□□□□ 0.42
COL9A3-206ENST00000466532 CNPPD1Q9BV87 410 aa17.68■□□□□ 0.42
COL9A3-206ENST00000466532 LDAHQ9H6V9 325 aa17.68■□□□□ 0.42
COL9A3-206ENST00000466532 SEMA4BQ9NPR2 832 aaPredicted RBP17.68■□□□□ 0.42
COL9A3-206ENST00000466532 SNX15Q9NRS6 342 aa17.68■□□□□ 0.42
COL9A3-206ENST00000466532 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.68■□□□□ 0.421e-7■■□□□ 12.3
COL9A3-206ENST00000466532 TNFRSF10DQ9UBN6 386 aa17.68■□□□□ 0.42
COL9A3-206ENST00000466532 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.68■□□□□ 0.42
COL9A3-206ENST00000466532 CCDC189A1A4V9 331 aa17.67■□□□□ 0.42
COL9A3-206ENST00000466532 LRRC14BA6NHZ5 514 aa17.67■□□□□ 0.42
COL9A3-206ENST00000466532 FOXO6A8MYZ6 492 aa17.67■□□□□ 0.42
COL9A3-206ENST00000466532 PROM1O43490 865 aa17.67■□□□□ 0.42
COL9A3-206ENST00000466532 NADKO95544 446 aaPredicted RBP17.67■□□□□ 0.42
COL9A3-206ENST00000466532 MSX1P28360 303 aa17.67■□□□□ 0.42
COL9A3-206ENST00000466532 HERVK_113P63132 956 aa17.67■□□□□ 0.42
COL9A3-206ENST00000466532 ERVK-8P63133 956 aa17.67■□□□□ 0.42
COL9A3-206ENST00000466532 GTF2H2Q13888 395 aa17.67■□□□□ 0.42
COL9A3-206ENST00000466532 SLC10A1Q14973 349 aa17.67■□□□□ 0.42
COL9A3-206ENST00000466532 ACAP2Q15057 778 aa17.67■□□□□ 0.42
COL9A3-206ENST00000466532 CPSF6Q16630 551 aaKnown RBP eCLIP17.67■□□□□ 0.42
COL9A3-206ENST00000466532 GTF2H2CQ6P1K8 395 aa17.67■□□□□ 0.42
COL9A3-206ENST00000466532 SLC15A4Q8N697 577 aa17.67■□□□□ 0.42
COL9A3-206ENST00000466532 GAL3ST4Q96RP7 486 aa17.67■□□□□ 0.42
COL9A3-206ENST00000466532 PELOQ9BRX2 385 aaKnown RBP17.67■□□□□ 0.42
COL9A3-206ENST00000466532 ERVK-6Q9BXR3 956 aa17.67■□□□□ 0.42
COL9A3-206ENST00000466532 ZNF717Q9BY31 904 aaPredicted RBP17.67■□□□□ 0.42
COL9A3-206ENST00000466532 EXO5Q9H790 373 aa17.67■□□□□ 0.42
COL9A3-206ENST00000466532 LYARQ9NX58 379 aaKnown RBP17.67■□□□□ 0.42
COL9A3-206ENST00000466532 CPSF2Q9P2I0 782 aaKnown RBP17.67■□□□□ 0.42
COL9A3-206ENST00000466532 ACAD8Q9UKU7 415 aa17.67■□□□□ 0.42
COL9A3-206ENST00000466532 ERVK-19Q9WJR5 959 aa17.67■□□□□ 0.42
COL9A3-206ENST00000466532 FAM215AQ9Y5M1 114 aa17.67■□□□□ 0.42
COL9A3-206ENST00000466532 A0A096LPK6 155 aa17.66■□□□□ 0.42
COL9A3-206ENST00000466532 A0A0A6YYD5 115 aa17.66■□□□□ 0.42
COL9A3-206ENST00000466532 IQANK1A0A1B0GTG1 560 aa17.66■□□□□ 0.42
COL9A3-206ENST00000466532 ESYT3A0FGR9 886 aa17.66■□□□□ 0.42
COL9A3-206ENST00000466532 HMX2A2RU54 273 aa17.66■□□□□ 0.42
COL9A3-206ENST00000466532 GLOD5A6NK44 160 aa17.66■□□□□ 0.42
COL9A3-206ENST00000466532 H0YIV9 168 aa17.66■□□□□ 0.42
COL9A3-206ENST00000466532 KLK8O60259 260 aa17.66■□□□□ 0.42
COL9A3-206ENST00000466532 SUSD5O60279 629 aa17.66■□□□□ 0.42
COL9A3-206ENST00000466532 OR10H2O60403 315 aa17.66■□□□□ 0.42
COL9A3-206ENST00000466532 UGDHO60701 494 aa17.66■□□□□ 0.42
COL9A3-206ENST00000466532 EEDO75530 441 aaKnown RBP17.66■□□□□ 0.42
COL9A3-206ENST00000466532 KLHL2O95198 593 aa17.66■□□□□ 0.42
COL9A3-206ENST00000466532 GPR75O95800 540 aa17.66■□□□□ 0.42
COL9A3-206ENST00000466532 BSGP35613 385 aa17.66■□□□□ 0.42
COL9A3-206ENST00000466532 KCNJ2P63252 427 aa17.66■□□□□ 0.42
COL9A3-206ENST00000466532 ZNF267Q14586 743 aaPredicted RBP17.66■□□□□ 0.42
COL9A3-206ENST00000466532 PCBP2Q15366 365 aaKnown RBP eCLIP17.66■□□□□ 0.422e-6■■■■□ 23.8
COL9A3-206ENST00000466532 UAP1Q16222 522 aaPredicted RBP17.66■□□□□ 0.42
COL9A3-206ENST00000466532 SPRED3Q2MJR0 410 aa17.66■□□□□ 0.42
COL9A3-206ENST00000466532 PRAMEF20Q5VT98 475 aa17.66■□□□□ 0.42
COL9A3-206ENST00000466532 KLC3Q6P597 504 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms