RNA–Protein interactions for RNA: ENST00000466471.1

SORT1-202, Transcript of sortilin 1, humanhuman

TSL 2

Gene SORT1, Length 521 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-202ENST00000466471 ADPRHL1Q8NDY3 354 aa3.29□□□□□ -1.88
SORT1-202ENST00000466471 MDGA1Q8NFP4 955 aa3.29□□□□□ -1.88
SORT1-202ENST00000466471 OR13J1Q8NGT2 312 aa3.29□□□□□ -1.88
SORT1-202ENST00000466471 OR14K1Q8NGZ2 314 aa3.29□□□□□ -1.88
SORT1-202ENST00000466471 OR6F1Q8NGZ6 308 aa3.29□□□□□ -1.88
SORT1-202ENST00000466471 JOSD2Q8TAC2 188 aa3.29□□□□□ -1.88
SORT1-202ENST00000466471 DEPDC1BQ8WUY9 529 aa3.29□□□□□ -1.88
SORT1-202ENST00000466471 OSCP1Q8WVF1 389 aa3.29□□□□□ -1.88
SORT1-202ENST00000466471 NPIPB3Q92617 1050 aa3.29□□□□□ -1.88
SORT1-202ENST00000466471 FGF14Q92915 247 aa3.29□□□□□ -1.88
SORT1-202ENST00000466471 NT5C3BQ969T7 300 aa3.29□□□□□ -1.88
SORT1-202ENST00000466471 VPS33AQ96AX1 596 aa3.29□□□□□ -1.88
SORT1-202ENST00000466471 ISG20Q96AZ6 181 aaKnown RBP3.29□□□□□ -1.88
SORT1-202ENST00000466471 ARRDC3Q96B67 414 aa3.29□□□□□ -1.88
SORT1-202ENST00000466471 CERS2Q96G23 380 aa3.29□□□□□ -1.88
SORT1-202ENST00000466471 PDLIM5Q96HC4 596 aaKnown RBP3.29□□□□□ -1.88
SORT1-202ENST00000466471 CCDC115Q96NT0 180 aa3.29□□□□□ -1.88
SORT1-202ENST00000466471 AGAP4Q96P64 663 aa3.29□□□□□ -1.88
SORT1-202ENST00000466471 VAT1Q99536 393 aa3.29□□□□□ -1.88
SORT1-202ENST00000466471 MRPL57Q9BQC6 102 aaKnown RBP3.29□□□□□ -1.88
SORT1-202ENST00000466471 DCUN1D5Q9BTE7 237 aa3.29□□□□□ -1.88
SORT1-202ENST00000466471 BDH2Q9BUT1 245 aa3.29□□□□□ -1.88
SORT1-202ENST00000466471 FUNDC2Q9BWH2 189 aa3.29□□□□□ -1.88
SORT1-202ENST00000466471 C1QTNF3Q9BXJ4 246 aa3.29□□□□□ -1.88
SORT1-202ENST00000466471 UGT2B28Q9BY64 529 aa3.29□□□□□ -1.88
SORT1-202ENST00000466471 NFKBIZQ9BYH8 718 aa3.29□□□□□ -1.88
SORT1-202ENST00000466471 NAA50Q9GZZ1 169 aaKnown RBP3.29□□□□□ -1.88
SORT1-202ENST00000466471 LHPPQ9H008 270 aa3.29□□□□□ -1.88
SORT1-202ENST00000466471 RHOJQ9H4E5 214 aa3.29□□□□□ -1.88
SORT1-202ENST00000466471 GORASP2Q9H8Y8 452 aa3.29□□□□□ -1.88
SORT1-202ENST00000466471 SEC61A2Q9H9S3 476 aa3.29□□□□□ -1.88
SORT1-202ENST00000466471 SDR39U1Q9NRG7 319 aaPredicted RBP3.29□□□□□ -1.88
SORT1-202ENST00000466471 CISHQ9NSE2 258 aa3.29□□□□□ -1.88
SORT1-202ENST00000466471 MRPS18AQ9NVS2 196 aaKnown RBP3.29□□□□□ -1.88
SORT1-202ENST00000466471 CYTH4Q9UIA0 394 aa3.29□□□□□ -1.88
SORT1-202ENST00000466471 KCNE5Q9UJ90 142 aa3.29□□□□□ -1.88
SORT1-202ENST00000466471 CPSF3Q9UKF6 684 aaKnown RBP3.29□□□□□ -1.88
SORT1-202ENST00000466471 POU2F3Q9UKI9 436 aa3.29□□□□□ -1.88
SORT1-202ENST00000466471 AGO2Q9UKV8 859 aaKnown RBP3.29□□□□□ -1.88
SORT1-202ENST00000466471 MKLN1Q9UL63 735 aa3.29□□□□□ -1.88
SORT1-202ENST00000466471 SATB2Q9UPW6 733 aa3.29□□□□□ -1.88
SORT1-202ENST00000466471 SH2B3Q9UQQ2 575 aa3.29□□□□□ -1.88
SORT1-202ENST00000466471 PCDHA10Q9Y5I2 948 aa3.29□□□□□ -1.88
SORT1-202ENST00000466471 CSNK1G3Q9Y6M4 447 aa3.29□□□□□ -1.88
SORT1-202ENST00000466471 NOTCH4Q99466 2003 aa3.29□□□□□ -1.88
SORT1-202ENST00000466471 VWA8A3KMH1 1905 aa3.29□□□□□ -1.88
SORT1-202ENST00000466471 PTPRDP23468 1912 aa3.29□□□□□ -1.88
SORT1-202ENST00000466471 KIAA1549LQ6ZVL6 1849 aa3.28□□□□□ -1.88
SORT1-202ENST00000466471 TLN2Q9Y4G6 2542 aa3.28□□□□□ -1.88
SORT1-202ENST00000466471 PTPRJQ12913 1337 aa3.28□□□□□ -1.88
SORT1-202ENST00000466471 TGP01266 2768 aa3.28□□□□□ -1.88
SORT1-202ENST00000466471 NBEAL2Q6ZNJ1 2754 aa3.28□□□□□ -1.88
SORT1-202ENST00000466471 A0A075B6Q4 140 aa3.28□□□□□ -1.88
SORT1-202ENST00000466471 LOC100509620A0A075B734 347 aa3.28□□□□□ -1.88
SORT1-202ENST00000466471 A0A087X1B8 175 aa3.28□□□□□ -1.88
SORT1-202ENST00000466471 IGKV6-21A0A0C4DH24 114 aa3.28□□□□□ -1.88
SORT1-202ENST00000466471 A0A1W2PP18 115 aa3.28□□□□□ -1.88
SORT1-202ENST00000466471 TRABD2BA6NFA1 517 aa3.28□□□□□ -1.88
SORT1-202ENST00000466471 AGAP5A6NIR3 686 aa3.28□□□□□ -1.88
SORT1-202ENST00000466471 METTL15A6NJ78 407 aa3.28□□□□□ -1.88
SORT1-202ENST00000466471 ZAR1LA6NP61 321 aa3.28□□□□□ -1.88
SORT1-202ENST00000466471 SYCE1LA8MT33 242 aa3.28□□□□□ -1.88
SORT1-202ENST00000466471 ZNF99A8MXY4 864 aaPredicted RBP3.28□□□□□ -1.88
SORT1-202ENST00000466471 KCNU1A8MYU2 1149 aa3.28□□□□□ -1.88
SORT1-202ENST00000466471 TMX2-CTNND1H3BSU7 103 aa3.28□□□□□ -1.88
SORT1-202ENST00000466471 H7C0C1 242 aa3.28□□□□□ -1.88
SORT1-202ENST00000466471 J3QRK9 145 aa3.28□□□□□ -1.88
SORT1-202ENST00000466471 EEF2KO00418 725 aaKnown RBP3.28□□□□□ -1.88
SORT1-202ENST00000466471 HAT1O14929 419 aa3.28□□□□□ -1.88
SORT1-202ENST00000466471 POLR1CO15160 346 aaPredicted RBP3.28□□□□□ -1.88
SORT1-202ENST00000466471 KCNN4O15554 427 aa3.28□□□□□ -1.88
SORT1-202ENST00000466471 TLX3O43711 291 aaPredicted RBP3.28□□□□□ -1.88
SORT1-202ENST00000466471 VPS4BO75351 444 aa3.28□□□□□ -1.88
SORT1-202ENST00000466471 TRIM3O75382 744 aaPredicted RBP3.28□□□□□ -1.88
SORT1-202ENST00000466471 MTRF1O75570 445 aaKnown RBP3.28□□□□□ -1.88
SORT1-202ENST00000466471 UGT2B17O75795 530 aa3.28□□□□□ -1.88
SORT1-202ENST00000466471 ZMPSTE24O75844 475 aa3.28□□□□□ -1.88
SORT1-202ENST00000466471 PIGNO95427 931 aa3.28□□□□□ -1.88
SORT1-202ENST00000466471 STAMBPO95630 424 aa3.28□□□□□ -1.88
SORT1-202ENST00000466471 AP2A1O95782 977 aa3.28□□□□□ -1.88
SORT1-202ENST00000466471 LDLRP01130 860 aa3.28□□□□□ -1.88
SORT1-202ENST00000466471 CHRNA1P02708 482 aa3.28□□□□□ -1.88
SORT1-202ENST00000466471 CHRNGP07510 517 aa3.28□□□□□ -1.88
SORT1-202ENST00000466471 APRTP07741 180 aa3.28□□□□□ -1.88
SORT1-202ENST00000466471 CHRM4P08173 479 aa3.28□□□□□ -1.88
SORT1-202ENST00000466471 HOXB5P09067 269 aa3.28□□□□□ -1.88
SORT1-202ENST00000466471 STAG3L1P0CL83 205 aa3.28□□□□□ -1.88
SORT1-202ENST00000466471 ITGAMP11215 1152 aa3.28□□□□□ -1.88
SORT1-202ENST00000466471 PCNAP12004 261 aa3.28□□□□□ -1.88
SORT1-202ENST00000466471 ACP5P13686 325 aa3.28□□□□□ -1.88
SORT1-202ENST00000466471 ENO3P13929 434 aaPredicted RBP3.28□□□□□ -1.88
SORT1-202ENST00000466471 HGFP14210 728 aa3.28□□□□□ -1.88
SORT1-202ENST00000466471 STMN1P16949 149 aa3.28□□□□□ -1.88
SORT1-202ENST00000466471 NAGAP17050 411 aa3.28□□□□□ -1.88
SORT1-202ENST00000466471 TNNI1P19237 187 aa3.28□□□□□ -1.88
SORT1-202ENST00000466471 POLR2CP19387 275 aaPredicted RBP3.28□□□□□ -1.88
SORT1-202ENST00000466471 ATP6V1B2P21281 511 aa3.28□□□□□ -1.88
SORT1-202ENST00000466471 RRM2P31350 389 aa3.28□□□□□ -1.88
SORT1-202ENST00000466471 ADRA1BP35368 520 aa3.28□□□□□ -1.88
SORT1-202ENST00000466471 CASP3P42574 277 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms