RNA–Protein interactions for RNA: ENST00000466274.1

NCL-208, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-208ENST00000466274 SCIMPQ6UWF3 145 aa5.34□□□□□ -1.55
NCL-208ENST00000466274 FAM47EQ6ZV65 393 aa5.34□□□□□ -1.55
NCL-208ENST00000466274 SNX20Q7Z614 316 aa5.34□□□□□ -1.55
NCL-208ENST00000466274 LUZP2Q86TE4 346 aa5.34□□□□□ -1.55
NCL-208ENST00000466274 MAP7D3Q8IWC1 876 aa5.34□□□□□ -1.55
NCL-208ENST00000466274 CNTD1Q8N815 330 aa5.34□□□□□ -1.55
NCL-208ENST00000466274 ZNF611Q8N823 705 aa5.34□□□□□ -1.55
NCL-208ENST00000466274 OR2L3Q8NG85 312 aa5.34□□□□□ -1.55
NCL-208ENST00000466274 NEIL3Q8TAT5 605 aa5.34□□□□□ -1.55
NCL-208ENST00000466274 IGFBPL1Q8WX77 278 aa5.34□□□□□ -1.55
NCL-208ENST00000466274 SYN2Q92777 582 aaPredicted RBP5.34□□□□□ -1.55
NCL-208ENST00000466274 TADA1Q96BN2 335 aa5.34□□□□□ -1.55
NCL-208ENST00000466274 SGCZQ96LD1 299 aa5.34□□□□□ -1.55
NCL-208ENST00000466274 HS6ST2Q96MM7 605 aa5.34□□□□□ -1.55
NCL-208ENST00000466274 ZFP3Q96NJ6 502 aa5.34□□□□□ -1.55
NCL-208ENST00000466274 WFIKKN1Q96NZ8 548 aa5.34□□□□□ -1.55
NCL-208ENST00000466274 CPPED1Q9BRF8 314 aaPredicted RBP5.34□□□□□ -1.55
NCL-208ENST00000466274 CALHM2Q9HA72 323 aa5.34□□□□□ -1.55
NCL-208ENST00000466274 MRPL47Q9HD33 250 aaKnown RBP5.34□□□□□ -1.55
NCL-208ENST00000466274 DEPPQ9NTK1 212 aa5.34□□□□□ -1.55
NCL-208ENST00000466274 RWDD2AQ9UIY3 292 aa5.34□□□□□ -1.55
NCL-208ENST00000466274 MAN1B1Q9UKM7 699 aa5.34□□□□□ -1.55
NCL-208ENST00000466274 FBXW2Q9UKT8 454 aa5.34□□□□□ -1.55
NCL-208ENST00000466274 PCDHA13Q9Y5I0 950 aa5.34□□□□□ -1.55
NCL-208ENST00000466274 SCINQ9Y6U3 715 aa5.34□□□□□ -1.55
NCL-208ENST00000466274 C15orf38-AP3S2A0A0A6YYH1 394 aa5.33□□□□□ -1.56
NCL-208ENST00000466274 LRRD1A4D1F6 860 aa5.33□□□□□ -1.56
NCL-208ENST00000466274 OR2A25A4D2G3 310 aa5.33□□□□□ -1.56
NCL-208ENST00000466274 PINLYPA6NC86 204 aa5.33□□□□□ -1.56
NCL-208ENST00000466274 MBD3L3A6NE82 208 aaPredicted RBP5.33□□□□□ -1.56
NCL-208ENST00000466274 C5orf60A6NFR6 353 aa5.33□□□□□ -1.56
NCL-208ENST00000466274 SAGE2PA6NJ88 616 aa5.33□□□□□ -1.56
NCL-208ENST00000466274 AGAP14A8MT82 685 aa5.33□□□□□ -1.56
NCL-208ENST00000466274 SLCO1B7G3V0H7 640 aa5.33□□□□□ -1.56
NCL-208ENST00000466274 HS3ST1O14792 307 aa5.33□□□□□ -1.56
NCL-208ENST00000466274 IL1R2P27930 398 aa5.33□□□□□ -1.56
NCL-208ENST00000466274 ACVR1BP36896 505 aa5.33□□□□□ -1.56
NCL-208ENST00000466274 WNT3AP56704 352 aa5.33□□□□□ -1.56
NCL-208ENST00000466274 RHAGQ02094 409 aa5.33□□□□□ -1.56
NCL-208ENST00000466274 RELAQ04206 551 aa5.33□□□□□ -1.56
NCL-208ENST00000466274 ZBTB17Q13105 803 aa5.33□□□□□ -1.56
NCL-208ENST00000466274 GAB1Q13480 694 aa5.33□□□□□ -1.56
NCL-208ENST00000466274 RCAN2Q14206 197 aa5.33□□□□□ -1.56
NCL-208ENST00000466274 PIGHQ14442 188 aaPredicted RBP5.33□□□□□ -1.56
NCL-208ENST00000466274 TAF1AQ15573 450 aaPredicted RBP5.33□□□□□ -1.56
NCL-208ENST00000466274 SLC1A5Q15758 541 aa5.33□□□□□ -1.56
NCL-208ENST00000466274 HADHQ16836 314 aaKnown RBP5.33□□□□□ -1.56
NCL-208ENST00000466274 TYSND1Q2T9J0 566 aa5.33□□□□□ -1.56
NCL-208ENST00000466274 SIRPB2Q5JXA9 342 aa5.33□□□□□ -1.56
NCL-208ENST00000466274 FAM166AQ6J272 317 aa5.33□□□□□ -1.56
NCL-208ENST00000466274 IL20RBQ6UXL0 311 aa5.33□□□□□ -1.56
NCL-208ENST00000466274 RTL4Q6ZR62 310 aa5.33□□□□□ -1.56
NCL-208ENST00000466274 SH2D5Q6ZV89 423 aa5.33□□□□□ -1.56
NCL-208ENST00000466274 TAS2R42Q7RTR8 314 aa5.33□□□□□ -1.56
NCL-208ENST00000466274 SLC25A41Q8N5S1 370 aa5.33□□□□□ -1.56
NCL-208ENST00000466274 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.33□□□□□ -1.56
NCL-208ENST00000466274 KCTD6Q8NC69 237 aa5.33□□□□□ -1.56
NCL-208ENST00000466274 PPHLN1Q8NEY8 458 aaKnown RBP5.33□□□□□ -1.56
NCL-208ENST00000466274 OR4K2Q8NGD2 314 aa5.33□□□□□ -1.56
NCL-208ENST00000466274 OR9A4Q8NGU2 314 aa5.33□□□□□ -1.56
NCL-208ENST00000466274 SPATA22Q8NHS9 363 aa5.33□□□□□ -1.56
NCL-208ENST00000466274 MBD3L2Q8NHZ7 208 aaPredicted RBP5.33□□□□□ -1.56
NCL-208ENST00000466274 GSDMBQ8TAX9 411 aa5.33□□□□□ -1.56
NCL-208ENST00000466274 RAD51AP1Q96B01 352 aa5.33□□□□□ -1.56
NCL-208ENST00000466274 TIGD1Q96MW7 591 aa5.33□□□□□ -1.56
NCL-208ENST00000466274 TRIB1Q96RU8 372 aa5.33□□□□□ -1.56
NCL-208ENST00000466274 AGPAT1Q99943 283 aa5.33□□□□□ -1.56
NCL-208ENST00000466274 C19orf43Q9BQ61 176 aa5.33□□□□□ -1.56
NCL-208ENST00000466274 SLC39A3Q9BRY0 314 aa5.33□□□□□ -1.56
NCL-208ENST00000466274 DPH7Q9BTV6 452 aa5.33□□□□□ -1.56
NCL-208ENST00000466274 TSSK1BQ9BXA7 367 aa5.33□□□□□ -1.56
NCL-208ENST00000466274 SLCO5A1Q9H2Y9 848 aa5.33□□□□□ -1.56
NCL-208ENST00000466274 GLOD4Q9HC38 313 aa5.33□□□□□ -1.56
NCL-208ENST00000466274 ANKHQ9HCJ1 492 aa5.33□□□□□ -1.56
NCL-208ENST00000466274 MRPS30Q9NP92 439 aaKnown RBP5.33□□□□□ -1.56
NCL-208ENST00000466274 ACKR4Q9NPB9 350 aa5.33□□□□□ -1.56
NCL-208ENST00000466274 SACM1LQ9NTJ5 587 aa5.33□□□□□ -1.56
NCL-208ENST00000466274 OXSMQ9NWU1 459 aa5.33□□□□□ -1.56
NCL-208ENST00000466274 QPCTLQ9NXS2 382 aa5.33□□□□□ -1.56
NCL-208ENST00000466274 KLHL28Q9NXS3 571 aa5.33□□□□□ -1.56
NCL-208ENST00000466274 H2AFY2Q9P0M6 372 aaPredicted RBP5.33□□□□□ -1.56
NCL-208ENST00000466274 HCN3Q9P1Z3 774 aa5.33□□□□□ -1.56
NCL-208ENST00000466274 SPRR3Q9UBC9 169 aa5.33□□□□□ -1.56
NCL-208ENST00000466274 INTUQ9ULD6 942 aa5.33□□□□□ -1.56
NCL-208ENST00000466274 LAMP3Q9UQV4 416 aa5.33□□□□□ -1.56
NCL-208ENST00000466274 ANKRD12Q6UB98 2062 aa5.33□□□□□ -1.56
NCL-208ENST00000466274 IGLV3-16A0A075B6K0 115 aa5.32□□□□□ -1.56
NCL-208ENST00000466274 TRBV11-1A0A0K0K1C0 115 aa5.32□□□□□ -1.56
NCL-208ENST00000466274 SLC5A10A0PJK1 596 aa5.32□□□□□ -1.56
NCL-208ENST00000466274 OR2W5A6NFC9 320 aa5.32□□□□□ -1.56
NCL-208ENST00000466274 A8MXE2 369 aa5.32□□□□□ -1.56
NCL-208ENST00000466274 PPP1R12AO14974 1030 aaPredicted RBP5.32□□□□□ -1.56
NCL-208ENST00000466274 KIAA0513O60268 411 aa5.32□□□□□ -1.56
NCL-208ENST00000466274 GPRIN2O60269 458 aa5.32□□□□□ -1.56
NCL-208ENST00000466274 B4GALT2O60909 372 aa5.32□□□□□ -1.56
NCL-208ENST00000466274 CDC123O75794 336 aaPredicted RBP5.32□□□□□ -1.56
NCL-208ENST00000466274 ZFAND5O76080 213 aa5.32□□□□□ -1.56
NCL-208ENST00000466274 CCNDBP1O95273 360 aa5.32□□□□□ -1.56
NCL-208ENST00000466274 FESP07332 822 aa5.32□□□□□ -1.56
NCL-208ENST00000466274 HSP90AA1P07900 732 aaKnown RBP5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms