RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 C19orf25Q9UFG5 118 aaPredicted RBP16.38■□□□□ 0.21
CPSF4-209ENST00000465132 FBXW2Q9UKT8 454 aa16.38■□□□□ 0.21
CPSF4-209ENST00000465132 FER1L5A0AVI2 2057 aa16.38■□□□□ 0.21
CPSF4-209ENST00000465132 HIVEP3Q5T1R4 2406 aa16.37■□□□□ 0.21
CPSF4-209ENST00000465132 GOLGA8QA0A0J9YX86 632 aa16.37■□□□□ 0.21
CPSF4-209ENST00000465132 ATP6AP2A0A1C7CYW4 349 aa16.37■□□□□ 0.21
CPSF4-209ENST00000465132 C1orf226A1L170 272 aa16.37■□□□□ 0.21
CPSF4-209ENST00000465132 GOLGA8OA6NCC3 632 aa16.37■□□□□ 0.21
CPSF4-209ENST00000465132 GMNCA6NCL1 334 aa16.37■□□□□ 0.21
CPSF4-209ENST00000465132 ZNF860A6NHJ4 632 aa16.37■□□□□ 0.21
CPSF4-209ENST00000465132 GOLGA8NF8WBI6 632 aa16.37■□□□□ 0.21
CPSF4-209ENST00000465132 ATP6AP2O75787 350 aa16.37■□□□□ 0.21
CPSF4-209ENST00000465132 MED26O95402 600 aa16.37■□□□□ 0.21
CPSF4-209ENST00000465132 CLDN1O95832 211 aa16.37■□□□□ 0.21
CPSF4-209ENST00000465132 HEXBP07686 556 aa16.37■□□□□ 0.21
CPSF4-209ENST00000465132 ZGLP1P0C6A0 271 aa16.37■□□□□ 0.21
CPSF4-209ENST00000465132 NR2F6P10588 404 aa16.37■□□□□ 0.21
CPSF4-209ENST00000465132 TPP2P29144 1249 aaPredicted RBP16.37■□□□□ 0.21
CPSF4-209ENST00000465132 LSP1P33241 339 aa16.37■□□□□ 0.21
CPSF4-209ENST00000465132 GNGT1P63211 74 aa16.37■□□□□ 0.21
CPSF4-209ENST00000465132 RPS6KA2Q15349 733 aa16.37■□□□□ 0.21
CPSF4-209ENST00000465132 NKG7Q16617 165 aa16.37■□□□□ 0.21
CPSF4-209ENST00000465132 MFSD4BQ5TF39 518 aa16.37■□□□□ 0.21
CPSF4-209ENST00000465132 ZNF793Q6ZN11 406 aa16.37■□□□□ 0.21
CPSF4-209ENST00000465132 Q6ZS92 163 aa16.37■□□□□ 0.21
CPSF4-209ENST00000465132 R3HCC1LQ7Z5L2 792 aaKnown RBP16.37■□□□□ 0.21
CPSF4-209ENST00000465132 ZADH2Q8N4Q0 377 aa16.37■□□□□ 0.21
CPSF4-209ENST00000465132 NATD1Q8N6N6 113 aa16.37■□□□□ 0.21
CPSF4-209ENST00000465132 PEX11GQ96HA9 241 aa16.37■□□□□ 0.21
CPSF4-209ENST00000465132 MAELQ96JY0 434 aaKnown RBP16.37■□□□□ 0.21
CPSF4-209ENST00000465132 BARD1Q99728 777 aaKnown RBP16.37■□□□□ 0.21
CPSF4-209ENST00000465132 CCDC28BQ9BUN5 200 aa16.37■□□□□ 0.21
CPSF4-209ENST00000465132 ZNF717Q9BY31 904 aaPredicted RBP16.37■□□□□ 0.21
CPSF4-209ENST00000465132 AKTIPQ9H8T0 292 aa16.37■□□□□ 0.21
CPSF4-209ENST00000465132 ZBTB20Q9HC78 741 aaPredicted RBP16.37■□□□□ 0.21
CPSF4-209ENST00000465132 ATP13A2Q9NQ11 1180 aa16.37■□□□□ 0.21
CPSF4-209ENST00000465132 TCF7L2Q9NQB0 619 aa16.37■□□□□ 0.21
CPSF4-209ENST00000465132 ANKUB1A6NFN9 424 aa16.36■□□□□ 0.21
CPSF4-209ENST00000465132 VSTM2BA6NLU5 285 aa16.36■□□□□ 0.21
CPSF4-209ENST00000465132 PROM1O43490 865 aa16.36■□□□□ 0.21
CPSF4-209ENST00000465132 PRMT3O60678 531 aa16.36■□□□□ 0.21
CPSF4-209ENST00000465132 EEDO75530 441 aaKnown RBP16.36■□□□□ 0.21
CPSF4-209ENST00000465132 BMP10O95393 424 aa16.36■□□□□ 0.21
CPSF4-209ENST00000465132 IDO1P14902 403 aa16.36■□□□□ 0.21
CPSF4-209ENST00000465132 COL8A1P27658 744 aa16.36■□□□□ 0.21
CPSF4-209ENST00000465132 TNFRSF17Q02223 184 aa16.36■□□□□ 0.21
CPSF4-209ENST00000465132 RUNX2Q13950 521 aa16.36■□□□□ 0.21
CPSF4-209ENST00000465132 KIAA0040Q15053 153 aa16.36■□□□□ 0.21
CPSF4-209ENST00000465132 GSTA3Q16772 222 aa16.36■□□□□ 0.21
CPSF4-209ENST00000465132 MINDY4Q4G0A6 757 aa16.36■□□□□ 0.21
CPSF4-209ENST00000465132 RFTN2Q52LD8 501 aaPredicted RBP16.36■□□□□ 0.21
CPSF4-209ENST00000465132 OR52E8Q6IFG1 317 aa16.36■□□□□ 0.21
CPSF4-209ENST00000465132 MRM1Q6IN84 353 aaKnown RBP16.36■□□□□ 0.21
CPSF4-209ENST00000465132 LARP4Q71RC2 724 aaKnown RBP eCLIP16.36■□□□□ 0.21
CPSF4-209ENST00000465132 OR2T11Q8NH01 316 aa16.36■□□□□ 0.21
CPSF4-209ENST00000465132 MTERF3Q96E29 417 aa16.36■□□□□ 0.21
CPSF4-209ENST00000465132 C11orf24Q96F05 449 aaPredicted RBP16.36■□□□□ 0.21
CPSF4-209ENST00000465132 PPP1R36Q96LQ0 422 aa16.36■□□□□ 0.21
CPSF4-209ENST00000465132 RILPQ96NA2 401 aa16.36■□□□□ 0.21
CPSF4-209ENST00000465132 PELOQ9BRX2 385 aaKnown RBP16.36■□□□□ 0.21
CPSF4-209ENST00000465132 RPF2Q9H7B2 306 aaKnown RBP16.36■□□□□ 0.21
CPSF4-209ENST00000465132 NPHS2Q9NP85 383 aa16.36■□□□□ 0.21
CPSF4-209ENST00000465132 MYNNQ9NPC7 610 aa16.36■□□□□ 0.21
CPSF4-209ENST00000465132 MIEF1Q9NQG6 463 aa16.36■□□□□ 0.21
CPSF4-209ENST00000465132 GIMAP4Q9NUV9 329 aa16.36■□□□□ 0.21
CPSF4-209ENST00000465132 EHD3Q9NZN3 535 aa16.36■□□□□ 0.21
CPSF4-209ENST00000465132 KCMF1Q9P0J7 381 aa16.36■□□□□ 0.21
CPSF4-209ENST00000465132 KLHL14Q9P2G3 628 aa16.36■□□□□ 0.21
CPSF4-209ENST00000465132 MKL2Q9ULH7 1088 aa16.36■□□□□ 0.21
CPSF4-209ENST00000465132 SLC5A6Q9Y289 635 aa16.36■□□□□ 0.21
CPSF4-209ENST00000465132 ASB4Q9Y574 426 aa16.36■□□□□ 0.21
CPSF4-209ENST00000465132 PCDHGA10Q9Y5H3 936 aa16.36■□□□□ 0.21
CPSF4-209ENST00000465132 COPG1Q9Y678 874 aaKnown RBP16.36■□□□□ 0.21
CPSF4-209ENST00000465132 DOPEY1Q5JWR5 2465 aa16.36■□□□□ 0.21
CPSF4-209ENST00000465132 NUP210LQ5VU65 1888 aa16.35■□□□□ 0.21
CPSF4-209ENST00000465132 C4orf51C9J302 202 aa16.35■□□□□ 0.21
CPSF4-209ENST00000465132 SDHDO14521 159 aa16.35■□□□□ 0.21
CPSF4-209ENST00000465132 DYRK3O43781 588 aa16.35■□□□□ 0.21
CPSF4-209ENST00000465132 CTNSO60931 367 aa16.35■□□□□ 0.21
CPSF4-209ENST00000465132 MMP11P24347 488 aa16.35■□□□□ 0.21
CPSF4-209ENST00000465132 EPHA3P29320 983 aa16.35■□□□□ 0.21
CPSF4-209ENST00000465132 HPCAL1P37235 193 aa16.35■□□□□ 0.21
CPSF4-209ENST00000465132 EMP2P54851 167 aa16.35■□□□□ 0.21
CPSF4-209ENST00000465132 TAS2R50P59544 299 aa16.35■□□□□ 0.21
CPSF4-209ENST00000465132 STX1BP61266 288 aa16.35■□□□□ 0.21
CPSF4-209ENST00000465132 OLR1P78380 273 aa16.35■□□□□ 0.21
CPSF4-209ENST00000465132 MAT1AQ00266 395 aaKnown RBP16.35■□□□□ 0.21
CPSF4-209ENST00000465132 STX4Q12846 297 aa16.35■□□□□ 0.21
CPSF4-209ENST00000465132 AIMP2Q13155 320 aaKnown RBP16.35■□□□□ 0.21
CPSF4-209ENST00000465132 SLC13A2Q13183 592 aa16.35■□□□□ 0.21
CPSF4-209ENST00000465132 SERTAD2Q14140 314 aa16.35■□□□□ 0.21
CPSF4-209ENST00000465132 IL23RQ5VWK5 629 aa16.35■□□□□ 0.21
CPSF4-209ENST00000465132 METTL21CQ5VZV1 264 aa16.35■□□□□ 0.21
CPSF4-209ENST00000465132 ZNF787Q6DD87 383 aa16.35■□□□□ 0.21
CPSF4-209ENST00000465132 QSOX2Q6ZRP7 698 aa16.35■□□□□ 0.21
CPSF4-209ENST00000465132 ZC3H7AQ8IWR0 971 aaKnown RBP16.35■□□□□ 0.21
CPSF4-209ENST00000465132 OR5T3Q8NGG3 340 aa16.35■□□□□ 0.21
CPSF4-209ENST00000465132 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.35■□□□□ 0.21
CPSF4-209ENST00000465132 FCRL1Q96LA6 429 aa16.35■□□□□ 0.21
CPSF4-209ENST00000465132 C3orf30Q96M34 536 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms