RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 TBL3Q12788 808 aaKnown RBP15.9■□□□□ 0.14
VPS52-215ENST00000464425 SERTAD2Q14140 314 aa15.9■□□□□ 0.14
VPS52-215ENST00000464425 TLR1Q15399 786 aa15.9■□□□□ 0.14
VPS52-215ENST00000464425 PAGE2Q7Z2X7 111 aa15.9■□□□□ 0.14
VPS52-215ENST00000464425 COMMD6Q7Z4G1 85 aa15.9■□□□□ 0.14
VPS52-215ENST00000464425 BEST3Q8N1M1 668 aa15.9■□□□□ 0.14
VPS52-215ENST00000464425 CISD2Q8N5K1 135 aaKnown RBP15.9■□□□□ 0.14
VPS52-215ENST00000464425 SLC5A8Q8N695 610 aa15.9■□□□□ 0.14
VPS52-215ENST00000464425 C1orf52Q8N6N3 182 aaKnown RBP15.9■□□□□ 0.14
VPS52-215ENST00000464425 ZNF781Q8N8C0 355 aa15.9■□□□□ 0.14
VPS52-215ENST00000464425 FAM76AQ8TAV0 307 aa15.9■□□□□ 0.14
VPS52-215ENST00000464425 CPT1CQ8TCG5 803 aa15.9■□□□□ 0.14
VPS52-215ENST00000464425 TANKQ92844 425 aa15.9■□□□□ 0.14
VPS52-215ENST00000464425 NCLNQ969V3 563 aa15.9■□□□□ 0.14
VPS52-215ENST00000464425 METTL2AQ96IZ6 378 aaKnown RBP15.9■□□□□ 0.14
VPS52-215ENST00000464425 ACPTQ9BZG2 426 aa15.9■□□□□ 0.14
VPS52-215ENST00000464425 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.9■□□□□ 0.14
VPS52-215ENST00000464425 CDCP1Q9H5V8 836 aa15.9■□□□□ 0.14
VPS52-215ENST00000464425 PFDN4Q9NQP4 134 aa15.9■□□□□ 0.14
VPS52-215ENST00000464425 ADAM29Q9UKF5 820 aa15.9■□□□□ 0.14
VPS52-215ENST00000464425 CLCA3PQ9Y6N3 262 aa15.9■□□□□ 0.14
VPS52-215ENST00000464425 TRBV11-1A0A0K0K1C0 115 aa15.89■□□□□ 0.13
VPS52-215ENST00000464425 TMEM233B4DJY2 109 aa15.89■□□□□ 0.13
VPS52-215ENST00000464425 NPIPB8E9PQR5 432 aa15.89■□□□□ 0.13
VPS52-215ENST00000464425 SLC28A1O00337 649 aa15.89■□□□□ 0.13
VPS52-215ENST00000464425 MAPK12P53778 367 aa15.89■□□□□ 0.13
VPS52-215ENST00000464425 HMGCS1Q01581 520 aa15.89■□□□□ 0.13
VPS52-215ENST00000464425 BTKQ06187 659 aa15.89■□□□□ 0.13
VPS52-215ENST00000464425 ZNF169Q14929 603 aaPredicted RBP15.89■□□□□ 0.13
VPS52-215ENST00000464425 TERF2Q15554 542 aa15.89■□□□□ 0.13
VPS52-215ENST00000464425 ELAVL1Q15717 326 aaKnown RBP15.89■□□□□ 0.13
VPS52-215ENST00000464425 INPP5JQ15735 1006 aaPredicted RBP15.89■□□□□ 0.13
VPS52-215ENST00000464425 MEP1AQ16819 746 aa15.89■□□□□ 0.13
VPS52-215ENST00000464425 RPS19BP1Q86WX3 136 aaKnown RBP15.89■□□□□ 0.13
VPS52-215ENST00000464425 TMEM132CQ8N3T6 1108 aa15.89■□□□□ 0.13
VPS52-215ENST00000464425 APCDD1LQ8NCL9 501 aa15.89■□□□□ 0.13
VPS52-215ENST00000464425 OR1N1Q8NGS0 311 aa15.89■□□□□ 0.13
VPS52-215ENST00000464425 DOK4Q8TEW6 326 aa15.89■□□□□ 0.13
VPS52-215ENST00000464425 THAP3Q8WTV1 239 aaPredicted RBP15.89■□□□□ 0.13
VPS52-215ENST00000464425 PTPMT1Q8WUK0 201 aaPredicted RBP15.89■□□□□ 0.13
VPS52-215ENST00000464425 TWIST2Q8WVJ9 160 aa15.89■□□□□ 0.13
VPS52-215ENST00000464425 HAS2Q92819 552 aa15.89■□□□□ 0.13
VPS52-215ENST00000464425 PPWD1Q96BP3 646 aaKnown RBP15.89■□□□□ 0.13
VPS52-215ENST00000464425 C19orf60Q96EN9 201 aa15.89■□□□□ 0.13
VPS52-215ENST00000464425 C7orf26Q96N11 449 aa15.89■□□□□ 0.13
VPS52-215ENST00000464425 DEFB126Q9BYW3 111 aa15.89■□□□□ 0.13
VPS52-215ENST00000464425 TUBB1Q9H4B7 451 aa15.89■□□□□ 0.13
VPS52-215ENST00000464425 WDR41Q9HAD4 459 aa15.89■□□□□ 0.13
VPS52-215ENST00000464425 SIRT5Q9NXA8 310 aa15.89■□□□□ 0.13
VPS52-215ENST00000464425 TEX10Q9NXF1 929 aaPredicted RBP15.89■□□□□ 0.13
VPS52-215ENST00000464425 ANKRD10Q9NXR5 420 aa15.89■□□□□ 0.13
VPS52-215ENST00000464425 CCL27Q9Y4X3 112 aa15.89■□□□□ 0.13
VPS52-215ENST00000464425 C17orf105B2RV13 164 aa15.88■□□□□ 0.13
VPS52-215ENST00000464425 SLCO1B7G3V0H7 640 aa15.88■□□□□ 0.13
VPS52-215ENST00000464425 PGRMC2O15173 223 aa15.88■□□□□ 0.13
VPS52-215ENST00000464425 RGS14O43566 566 aa15.88■□□□□ 0.13
VPS52-215ENST00000464425 RSL1D1O76021 490 aaKnown RBP15.88■□□□□ 0.13
VPS52-215ENST00000464425 GPR75O95800 540 aa15.88■□□□□ 0.13
VPS52-215ENST00000464425 PRPH2P23942 346 aa15.88■□□□□ 0.13
VPS52-215ENST00000464425 TNFSF10P50591 281 aa15.88■□□□□ 0.13
VPS52-215ENST00000464425 CLCN2P51788 898 aa15.88■□□□□ 0.13
VPS52-215ENST00000464425 GPR143P51810 404 aa15.88■□□□□ 0.13
VPS52-215ENST00000464425 HK2P52789 917 aa15.88■□□□□ 0.13
VPS52-215ENST00000464425 AGR3Q8TD06 166 aa15.88■□□□□ 0.13
VPS52-215ENST00000464425 CHTF18Q8WVB6 975 aa15.88■□□□□ 0.13
VPS52-215ENST00000464425 DAZLQ92904 295 aaKnown RBP15.88■□□□□ 0.13
VPS52-215ENST00000464425 VMP1Q96GC9 406 aa15.88■□□□□ 0.13
VPS52-215ENST00000464425 RBM18Q96H35 190 aaKnown RBP15.88■□□□□ 0.13
VPS52-215ENST00000464425 DGAT2Q96PD7 388 aa15.88■□□□□ 0.13
VPS52-215ENST00000464425 OR8D2Q9GZM6 311 aa15.88■□□□□ 0.13
VPS52-215ENST00000464425 ZNF223Q9UK11 482 aaPredicted RBP15.88■□□□□ 0.13
VPS52-215ENST00000464425 FIS1Q9Y3D6 152 aa15.88■□□□□ 0.13
VPS52-215ENST00000464425 PCDHGA10Q9Y5H3 936 aa15.88■□□□□ 0.13
VPS52-215ENST00000464425 SPENQ96T58 3664 aaKnown RBP15.88■□□□□ 0.13
VPS52-215ENST00000464425 HELZ2Q9BYK8 2649 aaKnown RBP15.88■□□□□ 0.13
VPS52-215ENST00000464425 OR5H15A6NDH6 313 aa15.87■□□□□ 0.13
VPS52-215ENST00000464425 LINC00032P0C843 101 aa15.87■□□□□ 0.13
VPS52-215ENST00000464425 STT3AP46977 705 aa15.87■□□□□ 0.13
VPS52-215ENST00000464425 IGLV3-21P80748 117 aaPredicted RBP15.87■□□□□ 0.13
VPS52-215ENST00000464425 FOXK1P85037 733 aa15.87■□□□□ 0.13
VPS52-215ENST00000464425 IMPG1Q17R60 797 aa15.87■□□□□ 0.13
VPS52-215ENST00000464425 SPIN4Q56A73 249 aa15.87■□□□□ 0.13
VPS52-215ENST00000464425 SPDYAQ5MJ70 313 aa15.87■□□□□ 0.13
VPS52-215ENST00000464425 NDUFAF5Q5TEU4 345 aa15.87■□□□□ 0.13
VPS52-215ENST00000464425 DGAT2L6Q6ZPD8 337 aa15.87■□□□□ 0.13
VPS52-215ENST00000464425 Q6ZSR9 355 aa15.87■□□□□ 0.13
VPS52-215ENST00000464425 MMP21Q8N119 569 aa15.87■□□□□ 0.13
VPS52-215ENST00000464425 ZNF321PQ8N8H1 164 aa15.87■□□□□ 0.13
VPS52-215ENST00000464425 OR14A16Q8NHC5 309 aa15.87■□□□□ 0.13
VPS52-215ENST00000464425 PIWIL2Q8TC59 973 aaKnown RBP15.87■□□□□ 0.13
VPS52-215ENST00000464425 MIB2Q96AX9 1013 aa15.87■□□□□ 0.13
VPS52-215ENST00000464425 TM4SF18Q96CE8 201 aa15.87■□□□□ 0.13
VPS52-215ENST00000464425 SNRNP40Q96DI7 357 aaKnown RBP15.87■□□□□ 0.13
VPS52-215ENST00000464425 C11orf24Q96F05 449 aaPredicted RBP15.87■□□□□ 0.13
VPS52-215ENST00000464425 APIPQ96GX9 242 aa15.87■□□□□ 0.13
VPS52-215ENST00000464425 RNF32Q9H0A6 362 aa15.87■□□□□ 0.13
VPS52-215ENST00000464425 CCDC134Q9H6E4 229 aa15.87■□□□□ 0.13
VPS52-215ENST00000464425 PNPOQ9NVS9 261 aa15.87■□□□□ 0.13
VPS52-215ENST00000464425 ABI3Q9P2A4 366 aa15.87■□□□□ 0.13
VPS52-215ENST00000464425 PPIEQ9UNP9 301 aaKnown RBP15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms