RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 ALDH3B2P48448 385 aa8.67□□□□□ -1.02
HPS4-208ENST00000464362 CLCN7P51798 805 aa8.67□□□□□ -1.02
HPS4-208ENST00000464362 ZNF45Q02386 682 aa8.67□□□□□ -1.02
HPS4-208ENST00000464362 ST3GAL3Q11203 375 aa8.67□□□□□ -1.02
HPS4-208ENST00000464362 SP140Q13342 867 aa8.67□□□□□ -1.02
HPS4-208ENST00000464362 TAF13Q15543 124 aa8.67□□□□□ -1.02
HPS4-208ENST00000464362 SLC27A4Q6P1M0 643 aa8.67□□□□□ -1.02
HPS4-208ENST00000464362 B3GLCTQ6Y288 498 aa8.67□□□□□ -1.02
HPS4-208ENST00000464362 KLBQ86Z14 1044 aa8.67□□□□□ -1.02
HPS4-208ENST00000464362 MINDY2Q8NBR6 621 aa8.67□□□□□ -1.02
HPS4-208ENST00000464362 C16orf78Q8WTQ4 265 aa8.67□□□□□ -1.02
HPS4-208ENST00000464362 WBP2Q969T9 261 aa8.67□□□□□ -1.02
HPS4-208ENST00000464362 ZNF354BQ96LW1 612 aa8.67□□□□□ -1.02
HPS4-208ENST00000464362 RHNO1Q9BSD3 238 aa8.67□□□□□ -1.02
HPS4-208ENST00000464362 TTYH1Q9H313 450 aaPredicted RBP8.67□□□□□ -1.02
HPS4-208ENST00000464362 MRPS33Q9Y291 106 aaKnown RBP8.67□□□□□ -1.02
HPS4-208ENST00000464362 GRXCR1A8MXD5 290 aa8.67□□□□□ -1.02
HPS4-208ENST00000464362 PROM1O43490 865 aa8.67□□□□□ -1.02
HPS4-208ENST00000464362 ZNF821O75541 412 aaPredicted RBP8.67□□□□□ -1.02
HPS4-208ENST00000464362 REM1O75628 298 aa8.67□□□□□ -1.02
HPS4-208ENST00000464362 FUCA1P04066 466 aa8.67□□□□□ -1.02
HPS4-208ENST00000464362 ASGR2P07307 311 aa8.67□□□□□ -1.02
HPS4-208ENST00000464362 PIM1P11309 404 aaPredicted RBP8.67□□□□□ -1.02
HPS4-208ENST00000464362 ACPPP15309 386 aa8.67□□□□□ -1.02
HPS4-208ENST00000464362 ACADLP28330 430 aa8.67□□□□□ -1.02
HPS4-208ENST00000464362 NAA10P41227 235 aaPredicted RBP8.67□□□□□ -1.02
HPS4-208ENST00000464362 OR12D2P58182 307 aa8.67□□□□□ -1.02
HPS4-208ENST00000464362 SKP1P63208 163 aa8.67□□□□□ -1.02
HPS4-208ENST00000464362 HTRA3P83110 453 aa8.67□□□□□ -1.02
HPS4-208ENST00000464362 PTGES3Q15185 160 aaKnown RBP8.67□□□□□ -1.02
HPS4-208ENST00000464362 CCSMST1Q4G0I0 132 aa8.67□□□□□ -1.02
HPS4-208ENST00000464362 SPRED1Q7Z699 444 aa8.67□□□□□ -1.02
HPS4-208ENST00000464362 GPR149Q86SP6 731 aa8.67□□□□□ -1.02
HPS4-208ENST00000464362 Q8N402 240 aa8.67□□□□□ -1.02
HPS4-208ENST00000464362 CHST4Q8NCG5 386 aa8.67□□□□□ -1.02
HPS4-208ENST00000464362 OR8J1Q8NGP2 316 aa8.67□□□□□ -1.02
HPS4-208ENST00000464362 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.67□□□□□ -1.022e-7■■■□□ 19.1
HPS4-208ENST00000464362 ZNF300Q96RE9 604 aaPredicted RBP8.67□□□□□ -1.02
HPS4-208ENST00000464362 DPH7Q9BTV6 452 aa8.67□□□□□ -1.02
HPS4-208ENST00000464362 ACOT13Q9NPJ3 140 aa8.67□□□□□ -1.02
HPS4-208ENST00000464362 NANSQ9NR45 359 aa8.67□□□□□ -1.02
HPS4-208ENST00000464362 ENAMQ9NRM1 1142 aa8.67□□□□□ -1.02
HPS4-208ENST00000464362 CALML5Q9NZT1 146 aa8.67□□□□□ -1.02
HPS4-208ENST00000464362 MRPL15Q9P015 296 aaKnown RBP8.67□□□□□ -1.02
HPS4-208ENST00000464362 NUFIP1Q9UHK0 495 aaKnown RBP8.67□□□□□ -1.02
HPS4-208ENST00000464362 MGAT4BQ9UQ53 548 aa8.67□□□□□ -1.02
HPS4-208ENST00000464362 CMAHPQ9Y471 501 aa8.67□□□□□ -1.02
HPS4-208ENST00000464362 ENPP4Q9Y6X5 453 aa8.67□□□□□ -1.02
HPS4-208ENST00000464362 A0A1W2PP55 124 aa8.66□□□□□ -1.02
HPS4-208ENST00000464362 A0A1W2PRG6 482 aa8.66□□□□□ -1.02
HPS4-208ENST00000464362 IGLON5A6NGN9 336 aa8.66□□□□□ -1.02
HPS4-208ENST00000464362 TARM1B6A8C7 271 aa8.66□□□□□ -1.02
HPS4-208ENST00000464362 I3L521 148 aa8.66□□□□□ -1.02
HPS4-208ENST00000464362 HLA-FP30511 346 aa8.66□□□□□ -1.02
HPS4-208ENST00000464362 GDI1P31150 447 aa8.66□□□□□ -1.02
HPS4-208ENST00000464362 PYCR1P32322 319 aa8.66□□□□□ -1.02
HPS4-208ENST00000464362 GCGRP47871 477 aa8.66□□□□□ -1.02
HPS4-208ENST00000464362 DAPP51397 102 aa8.66□□□□□ -1.02
HPS4-208ENST00000464362 CAV3P56539 151 aa8.66□□□□□ -1.02
HPS4-208ENST00000464362 GABARAPL2P60520 117 aa8.66□□□□□ -1.02
HPS4-208ENST00000464362 SELENOWP63302 87 aa8.66□□□□□ -1.02
HPS4-208ENST00000464362 SLAMF1Q13291 335 aa8.66□□□□□ -1.02
HPS4-208ENST00000464362 ADNP2Q6IQ32 1131 aa8.66□□□□□ -1.02
HPS4-208ENST00000464362 MTFR2Q6P444 385 aa8.66□□□□□ -1.02
HPS4-208ENST00000464362 OAFQ86UD1 273 aa8.66□□□□□ -1.02
HPS4-208ENST00000464362 OR13F1Q8NGS4 319 aa8.66□□□□□ -1.02
HPS4-208ENST00000464362 SLC25A36Q96CQ1 311 aa8.66□□□□□ -1.02
HPS4-208ENST00000464362 TCEAL4Q96EI5 215 aa8.66□□□□□ -1.02
HPS4-208ENST00000464362 SIPA1Q96FS4 1042 aa8.66□□□□□ -1.02
HPS4-208ENST00000464362 CLMPQ9H6B4 373 aa8.66□□□□□ -1.02
HPS4-208ENST00000464362 MAGIXQ9H6Y5 334 aa8.66□□□□□ -1.02
HPS4-208ENST00000464362 GORASP2Q9H8Y8 452 aa8.66□□□□□ -1.02
HPS4-208ENST00000464362 IL37Q9NZH6 218 aa8.66□□□□□ -1.02
HPS4-208ENST00000464362 COQ3Q9NZJ6 369 aa8.66□□□□□ -1.02
HPS4-208ENST00000464362 LHX3Q9UBR4 397 aa8.66□□□□□ -1.02
HPS4-208ENST00000464362 NDRG2Q9UN36 371 aaKnown RBP8.66□□□□□ -1.02
HPS4-208ENST00000464362 BOLA1Q9Y3E2 137 aa8.66□□□□□ -1.02
HPS4-208ENST00000464362 TAF1LQ8IZX4 1826 aa8.66□□□□□ -1.02
HPS4-208ENST00000464362 LOC100509620A0A075B734 347 aa8.66□□□□□ -1.02
HPS4-208ENST00000464362 A0A1W2PQL4 384 aaPredicted RBP8.66□□□□□ -1.02
HPS4-208ENST00000464362 INMT-MINDY4F8WBC2 141 aa8.66□□□□□ -1.02
HPS4-208ENST00000464362 WWP2O00308 870 aa8.66□□□□□ -1.02
HPS4-208ENST00000464362 GSTT2P0CG29 244 aa8.66□□□□□ -1.02
HPS4-208ENST00000464362 GSTT2BP0CG30 244 aa8.66□□□□□ -1.02
HPS4-208ENST00000464362 BMP4P12644 408 aa8.66□□□□□ -1.02
HPS4-208ENST00000464362 C6P13671 934 aa8.66□□□□□ -1.02
HPS4-208ENST00000464362 ZNF24P17028 368 aa8.66□□□□□ -1.02
HPS4-208ENST00000464362 POLR2CP19387 275 aaPredicted RBP8.66□□□□□ -1.02
HPS4-208ENST00000464362 CD40LGP29965 261 aa8.66□□□□□ -1.02
HPS4-208ENST00000464362 PIK3CBP42338 1070 aa8.66□□□□□ -1.02
HPS4-208ENST00000464362 SIM1P81133 766 aaPredicted RBP8.66□□□□□ -1.02
HPS4-208ENST00000464362 APOFQ13790 326 aa8.66□□□□□ -1.02
HPS4-208ENST00000464362 PDGFRLQ15198 375 aa8.66□□□□□ -1.02
HPS4-208ENST00000464362 ZNF542PQ5EBM4 170 aa8.66□□□□□ -1.02
HPS4-208ENST00000464362 XKR4Q5GH76 650 aa8.66□□□□□ -1.02
HPS4-208ENST00000464362 LIN54Q6MZP7 749 aa8.66□□□□□ -1.02
HPS4-208ENST00000464362 BCDIN3DQ7Z5W3 292 aaKnown RBP8.66□□□□□ -1.02
HPS4-208ENST00000464362 JAZF1Q86VZ6 243 aa8.66□□□□□ -1.02
HPS4-208ENST00000464362 METTL27Q8N6F8 245 aaPredicted RBP8.66□□□□□ -1.02
HPS4-208ENST00000464362 CYB561A3Q8NBI2 242 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms