RNA–Protein interactions for RNA: ENST00000464078.5

HMGN1-210, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-210ENST00000464078 FREM3P0C091 2139 aa15.89■□□□□ 0.13
HMGN1-210ENST00000464078 AHRRA9YTQ3 701 aa15.89■□□□□ 0.13
HMGN1-210ENST00000464078 CES2O00748 559 aa15.89■□□□□ 0.13
HMGN1-210ENST00000464078 DYRK3O43781 588 aa15.89■□□□□ 0.13
HMGN1-210ENST00000464078 FGF17O60258 216 aa15.89■□□□□ 0.13
HMGN1-210ENST00000464078 STK16O75716 305 aa15.89■□□□□ 0.13
HMGN1-210ENST00000464078 EPPINO95925 133 aa15.89■□□□□ 0.13
HMGN1-210ENST00000464078 EPORP19235 508 aa15.89■□□□□ 0.13
HMGN1-210ENST00000464078 PLIN5Q00G26 463 aa15.89■□□□□ 0.13
HMGN1-210ENST00000464078 ID2Q02363 134 aa15.89■□□□□ 0.13
HMGN1-210ENST00000464078 CRYZQ08257 329 aaKnown RBP15.89■□□□□ 0.13
HMGN1-210ENST00000464078 SULT1C3Q6IMI6 304 aa15.89■□□□□ 0.13
HMGN1-210ENST00000464078 POMZP3Q6PJE2 187 aa15.89■□□□□ 0.13
HMGN1-210ENST00000464078 LRRC8AQ8IWT6 810 aa15.89■□□□□ 0.13
HMGN1-210ENST00000464078 LIX1Q8N485 282 aa15.89■□□□□ 0.13
HMGN1-210ENST00000464078 PDPRQ8NCN5 879 aa15.89■□□□□ 0.13
HMGN1-210ENST00000464078 ZNF473Q8WTR7 871 aaKnown RBP15.89■□□□□ 0.13
HMGN1-210ENST00000464078 DGAT2Q96PD7 388 aa15.89■□□□□ 0.13
HMGN1-210ENST00000464078 DDX47Q9H0S4 455 aaKnown RBP15.89■□□□□ 0.13
HMGN1-210ENST00000464078 NSMCE4AQ9NXX6 385 aa15.89■□□□□ 0.13
HMGN1-210ENST00000464078 MOCS1Q9NZB8 636 aa15.89■□□□□ 0.13
HMGN1-210ENST00000464078 IKBKGQ9Y6K9 419 aa15.89■□□□□ 0.13
HMGN1-210ENST00000464078 NINQ8N4C6 2090 aa15.89■□□□□ 0.13
HMGN1-210ENST00000464078 ANKRD33BA6NCL7 494 aa15.88■□□□□ 0.13
HMGN1-210ENST00000464078 ATE1O95260 518 aa15.88■□□□□ 0.13
HMGN1-210ENST00000464078 TACR1P25103 407 aa15.88■□□□□ 0.13
HMGN1-210ENST00000464078 SERPINB1P30740 379 aa15.88■□□□□ 0.13
HMGN1-210ENST00000464078 CASP2P42575 452 aa15.88■□□□□ 0.13
HMGN1-210ENST00000464078 HSPA7P48741 367 aa15.88■□□□□ 0.13
HMGN1-210ENST00000464078 SORDQ00796 357 aa15.88■□□□□ 0.13
HMGN1-210ENST00000464078 NTRK2Q16620 822 aa15.88■□□□□ 0.13
HMGN1-210ENST00000464078 SPRED3Q2MJR0 410 aa15.88■□□□□ 0.13
HMGN1-210ENST00000464078 DEFB113Q30KQ7 82 aa15.88■□□□□ 0.13
HMGN1-210ENST00000464078 TBCELQ5QJ74 424 aa15.88■□□□□ 0.13
HMGN1-210ENST00000464078 LAS2Q8IYD9 372 aa15.88■□□□□ 0.13
HMGN1-210ENST00000464078 SNX31Q8N9S9 440 aa15.88■□□□□ 0.13
HMGN1-210ENST00000464078 FAM13CQ8NE31 585 aa15.88■□□□□ 0.13
HMGN1-210ENST00000464078 TNIP2Q8NFZ5 429 aa15.88■□□□□ 0.13
HMGN1-210ENST00000464078 OR10G3Q8NGC4 313 aa15.88■□□□□ 0.13
HMGN1-210ENST00000464078 HSPBAP1Q96EW2 488 aa15.88■□□□□ 0.13
HMGN1-210ENST00000464078 PRDM14Q9GZV8 571 aa15.88■□□□□ 0.13
HMGN1-210ENST00000464078 TRMT1Q9NXH9 659 aaKnown RBP15.88■□□□□ 0.13
HMGN1-210ENST00000464078 MS4A12Q9NXJ0 267 aa15.88■□□□□ 0.13
HMGN1-210ENST00000464078 CNOT11Q9UKZ1 510 aaKnown RBP15.88■□□□□ 0.13
HMGN1-210ENST00000464078 HRKO00198 91 aa15.87■□□□□ 0.13
HMGN1-210ENST00000464078 RTCAO00442 366 aaKnown RBP15.87■□□□□ 0.13
HMGN1-210ENST00000464078 TRIM3O75382 744 aaPredicted RBP15.87■□□□□ 0.13
HMGN1-210ENST00000464078 C1QAP02745 245 aa15.87■□□□□ 0.13
HMGN1-210ENST00000464078 CPN2P22792 545 aa15.87■□□□□ 0.13
HMGN1-210ENST00000464078 SERPINB3P29508 390 aa15.87■□□□□ 0.13
HMGN1-210ENST00000464078 MSH2P43246 934 aa15.87■□□□□ 0.13
HMGN1-210ENST00000464078 SSR2P43308 183 aa15.87■□□□□ 0.13
HMGN1-210ENST00000464078 POU4F1Q01851 419 aa15.87■□□□□ 0.13
HMGN1-210ENST00000464078 IRF8Q02556 426 aa15.87■□□□□ 0.13
HMGN1-210ENST00000464078 PCDH1Q08174 1060 aa15.87■□□□□ 0.13
HMGN1-210ENST00000464078 DUSP8Q13202 625 aa15.87■□□□□ 0.13
HMGN1-210ENST00000464078 CHIT1Q13231 466 aa15.87■□□□□ 0.13
HMGN1-210ENST00000464078 HIST2H2ACQ16777 129 aaPredicted RBP15.87■□□□□ 0.13
HMGN1-210ENST00000464078 AP5B1Q2VPB7 878 aa15.87■□□□□ 0.13
HMGN1-210ENST00000464078 HIST2H2AA3Q6FI13 130 aa15.87■□□□□ 0.13
HMGN1-210ENST00000464078 DGAT2L6Q6ZPD8 337 aa15.87■□□□□ 0.13
HMGN1-210ENST00000464078 CHSY3Q70JA7 882 aa15.87■□□□□ 0.13
HMGN1-210ENST00000464078 KIF18BQ86Y91 864 aa15.87■□□□□ 0.13
HMGN1-210ENST00000464078 GPSM1Q86YR5 675 aa15.87■□□□□ 0.13
HMGN1-210ENST00000464078 ST13P4Q8IZP2 240 aaPredicted RBP15.87■□□□□ 0.13
HMGN1-210ENST00000464078 TANKQ92844 425 aa15.87■□□□□ 0.13
HMGN1-210ENST00000464078 UBE2E3Q969T4 207 aa15.87■□□□□ 0.13
HMGN1-210ENST00000464078 RBM18Q96H35 190 aaKnown RBP15.87■□□□□ 0.13
HMGN1-210ENST00000464078 ZNF597Q96LX8 424 aa15.87■□□□□ 0.13
HMGN1-210ENST00000464078 DOHHQ9BU89 302 aa15.87■□□□□ 0.13
HMGN1-210ENST00000464078 PHACTR1Q9C0D0 580 aa15.87■□□□□ 0.13
HMGN1-210ENST00000464078 WWTR1Q9GZV5 400 aa15.87■□□□□ 0.13
HMGN1-210ENST00000464078 PTBP2Q9UKA9 531 aaKnown RBP15.87■□□□□ 0.13
HMGN1-210ENST00000464078 DOCK7Q96N67 2140 aa15.86■□□□□ 0.13
HMGN1-210ENST00000464078 C15orf38-AP3S2A0A0A6YYH1 394 aa15.86■□□□□ 0.13
HMGN1-210ENST00000464078 TUBAL3A6NHL2 446 aa15.86■□□□□ 0.13
HMGN1-210ENST00000464078 EPXP11678 715 aa15.86■□□□□ 0.13
HMGN1-210ENST00000464078 ZNF136P52737 540 aa15.86■□□□□ 0.13
HMGN1-210ENST00000464078 SLC12A2P55011 1212 aa15.86■□□□□ 0.13
HMGN1-210ENST00000464078 ARL4CP56559 192 aa15.86■□□□□ 0.13
HMGN1-210ENST00000464078 ATP6V0D1P61421 351 aa15.86■□□□□ 0.13
HMGN1-210ENST00000464078 TNFRSF17Q02223 184 aa15.86■□□□□ 0.13
HMGN1-210ENST00000464078 EBPQ15125 230 aaKnown RBP15.86■□□□□ 0.13
HMGN1-210ENST00000464078 SF3B4Q15427 424 aaKnown RBP eCLIP15.86■□□□□ 0.132e-7■■■■□ 20.5
HMGN1-210ENST00000464078 FBXO48Q5FWF7 155 aa15.86■□□□□ 0.13
HMGN1-210ENST00000464078 KHDRBS2Q5VWX1 349 aaKnown RBP15.86■□□□□ 0.13
HMGN1-210ENST00000464078 NSUN5P2Q63ZY6 315 aa15.86■□□□□ 0.13
HMGN1-210ENST00000464078 SYDE1Q6ZW31 735 aaPredicted RBP15.86■□□□□ 0.13
HMGN1-210ENST00000464078 SLC29A4Q7RTT9 530 aa15.86■□□□□ 0.13
HMGN1-210ENST00000464078 LRRC70Q7Z2Q7 622 aa15.86■□□□□ 0.13
HMGN1-210ENST00000464078 OR4N5Q8IXE1 308 aa15.86■□□□□ 0.13
HMGN1-210ENST00000464078 PM20D2Q8IYS1 436 aa15.86■□□□□ 0.13
HMGN1-210ENST00000464078 WFDC11Q8NEX6 87 aa15.86■□□□□ 0.13
HMGN1-210ENST00000464078 ESAMQ96AP7 390 aa15.86■□□□□ 0.13
HMGN1-210ENST00000464078 TSPAN17Q96FV3 270 aa15.86■□□□□ 0.13
HMGN1-210ENST00000464078 KRT12Q99456 494 aa15.86■□□□□ 0.13
HMGN1-210ENST00000464078 TIMP4Q99727 224 aa15.86■□□□□ 0.13
HMGN1-210ENST00000464078 PELOQ9BRX2 385 aaKnown RBP15.86■□□□□ 0.13
HMGN1-210ENST00000464078 UBQLN3Q9H347 655 aa15.86■□□□□ 0.13
HMGN1-210ENST00000464078 RPF2Q9H7B2 306 aaKnown RBP15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms