RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 WFDC6Q9BQY6 131 aa12.11□□□□□ -0.47
VAPB-203ENST00000463370 EPB41L1Q9H4G0 881 aa12.11□□□□□ -0.47
VAPB-203ENST00000463370 RIBC2Q9H4K1 309 aa12.11□□□□□ -0.47
VAPB-203ENST00000463370 A4GALTQ9NPC4 353 aa12.11□□□□□ -0.47
VAPB-203ENST00000463370 ZCCHC3Q9NUD5 404 aaKnown RBP12.11□□□□□ -0.47
VAPB-203ENST00000463370 POT1Q9NUX5 634 aa12.11□□□□□ -0.47
VAPB-203ENST00000463370 HRASLS2Q9NWW9 162 aa12.11□□□□□ -0.47
VAPB-203ENST00000463370 C3orf18Q9UK00 162 aa12.11□□□□□ -0.47
VAPB-203ENST00000463370 ANGPT4Q9Y264 503 aa12.11□□□□□ -0.47
VAPB-203ENST00000463370 LYVE1Q9Y5Y7 322 aa12.11□□□□□ -0.47
VAPB-203ENST00000463370 TRIM64CA6NLI5 447 aa12.1□□□□□ -0.47
VAPB-203ENST00000463370 B4DGG1 531 aa12.1□□□□□ -0.47
VAPB-203ENST00000463370 CTSBP07858 339 aa12.1□□□□□ -0.47
VAPB-203ENST00000463370 CTSEP14091 401 aa12.1□□□□□ -0.47
VAPB-203ENST00000463370 TYRP1P17643 537 aa12.1□□□□□ -0.47
VAPB-203ENST00000463370 AGXTP21549 392 aa12.1□□□□□ -0.47
VAPB-203ENST00000463370 OLR1P78380 273 aa12.1□□□□□ -0.47
VAPB-203ENST00000463370 CD47Q08722 323 aa12.1□□□□□ -0.47
VAPB-203ENST00000463370 RAPSNQ13702 412 aa12.1□□□□□ -0.47
VAPB-203ENST00000463370 PUM1Q14671 1186 aaKnown RBP eCLIP12.1□□□□□ -0.474e-7■□□□□ 9.7
VAPB-203ENST00000463370 TTC23Q5W5X9 447 aa12.1□□□□□ -0.47
VAPB-203ENST00000463370 C8orf59Q8N0T1 100 aaPredicted RBP12.1□□□□□ -0.47
VAPB-203ENST00000463370 FAM46DQ8NEK8 389 aa12.1□□□□□ -0.47
VAPB-203ENST00000463370 ZNF555Q8NEP9 628 aa12.1□□□□□ -0.47
VAPB-203ENST00000463370 NT5CQ8TCD5 201 aa12.1□□□□□ -0.47
VAPB-203ENST00000463370 RSC1A1Q92681 617 aa12.1□□□□□ -0.47
VAPB-203ENST00000463370 HLA-CQ95604 372 aa12.1□□□□□ -0.47
VAPB-203ENST00000463370 GAL3ST3Q96A11 431 aa12.1□□□□□ -0.47
VAPB-203ENST00000463370 KLHDC7BQ96G42 594 aa12.1□□□□□ -0.47
VAPB-203ENST00000463370 ZNF300Q96RE9 604 aaPredicted RBP12.1□□□□□ -0.47
VAPB-203ENST00000463370 CSF3RQ99062 836 aa12.1□□□□□ -0.47
VAPB-203ENST00000463370 ING2Q9H160 280 aa12.1□□□□□ -0.47
VAPB-203ENST00000463370 OR51I1Q9H343 314 aa12.1□□□□□ -0.47
VAPB-203ENST00000463370 ARHGEF17Q96PE2 2063 aaPredicted RBP12.1□□□□□ -0.47
VAPB-203ENST00000463370 FANCMQ8IYD8 2048 aa12.1□□□□□ -0.47
VAPB-203ENST00000463370 ZNF860A6NHJ4 632 aa12.1□□□□□ -0.47
VAPB-203ENST00000463370 FAM170BA6NMN3 283 aa12.1□□□□□ -0.47
VAPB-203ENST00000463370 TOR1BO14657 336 aa12.1□□□□□ -0.47
VAPB-203ENST00000463370 SEMA7AO75326 666 aa12.1□□□□□ -0.47
VAPB-203ENST00000463370 EIF2S1P05198 315 aaKnown RBP12.1□□□□□ -0.47
VAPB-203ENST00000463370 NTSP30990 170 aa12.1□□□□□ -0.47
VAPB-203ENST00000463370 CLK3P49761 638 aaKnown RBP12.1□□□□□ -0.47
VAPB-203ENST00000463370 ISL1P61371 349 aa12.1□□□□□ -0.47
VAPB-203ENST00000463370 TUBA4AP68366 448 aa12.1□□□□□ -0.47
VAPB-203ENST00000463370 RGS1Q08116 209 aa12.1□□□□□ -0.47
VAPB-203ENST00000463370 LTB4RQ15722 352 aa12.1□□□□□ -0.47
VAPB-203ENST00000463370 COMTD1Q86VU5 262 aa12.1□□□□□ -0.47
VAPB-203ENST00000463370 PARGQ86W56 976 aa12.1□□□□□ -0.47
VAPB-203ENST00000463370 ATG16L2Q8NAA4 619 aa12.1□□□□□ -0.47
VAPB-203ENST00000463370 CHDHQ8NE62 594 aaPredicted RBP12.1□□□□□ -0.47
VAPB-203ENST00000463370 SRFBP1Q8NEF9 429 aaKnown RBP12.1□□□□□ -0.47
VAPB-203ENST00000463370 GPR32P1Q8NGA4 272 aa12.1□□□□□ -0.47
VAPB-203ENST00000463370 OR9A2Q8NGT5 310 aa12.1□□□□□ -0.47
VAPB-203ENST00000463370 NMD3Q96D46 503 aaKnown RBP12.1□□□□□ -0.47
VAPB-203ENST00000463370 C16orf58Q96GQ5 468 aa12.1□□□□□ -0.47
VAPB-203ENST00000463370 C10orf90Q96M02 699 aa12.1□□□□□ -0.47
VAPB-203ENST00000463370 ZNF681Q96N22 645 aa12.1□□□□□ -0.47
VAPB-203ENST00000463370 TSC22D3Q99576 134 aa12.1□□□□□ -0.47
VAPB-203ENST00000463370 RLIMQ9NVW2 624 aa12.1□□□□□ -0.47
VAPB-203ENST00000463370 PCDHGA2Q9Y5H1 932 aa12.1□□□□□ -0.47
VAPB-203ENST00000463370 BMP10O95393 424 aa12.09□□□□□ -0.47
VAPB-203ENST00000463370 SLC35G6P0C7Q6 338 aa12.09□□□□□ -0.47
VAPB-203ENST00000463370 SMIM10L1P0DMW3 83 aa12.09□□□□□ -0.47
VAPB-203ENST00000463370 JUNDP17535 347 aa12.09□□□□□ -0.47
VAPB-203ENST00000463370 CD247P20963 164 aa12.09□□□□□ -0.47
VAPB-203ENST00000463370 GSTT1P30711 240 aa12.09□□□□□ -0.47
VAPB-203ENST00000463370 ARHGDIAP52565 204 aa12.09□□□□□ -0.47
VAPB-203ENST00000463370 ARFIP1P53367 373 aa12.09□□□□□ -0.47
VAPB-203ENST00000463370 CDH12P55289 794 aa12.09□□□□□ -0.47
VAPB-203ENST00000463370 HHEXQ03014 270 aa12.09□□□□□ -0.47
VAPB-203ENST00000463370 RUNX2Q13950 521 aa12.09□□□□□ -0.47
VAPB-203ENST00000463370 GANABQ14697 944 aaKnown RBP12.09□□□□□ -0.47
VAPB-203ENST00000463370 ZNF691Q5VV52 312 aa12.09□□□□□ -0.47
VAPB-203ENST00000463370 FAHD1Q6P587 224 aa12.09□□□□□ -0.47
VAPB-203ENST00000463370 OR4N5Q8IXE1 308 aa12.09□□□□□ -0.47
VAPB-203ENST00000463370 SIMC1Q8NDZ2 872 aa12.09□□□□□ -0.47
VAPB-203ENST00000463370 APOBEC4Q8WW27 367 aaKnown RBP12.09□□□□□ -0.47
VAPB-203ENST00000463370 XAGE5Q8WWM1 108 aa12.09□□□□□ -0.47
VAPB-203ENST00000463370 SMIM10Q96HG1 83 aa12.09□□□□□ -0.47
VAPB-203ENST00000463370 SLC35G5Q96KT7 338 aa12.09□□□□□ -0.47
VAPB-203ENST00000463370 EPYCQ99645 322 aa12.09□□□□□ -0.47
VAPB-203ENST00000463370 STARD5Q9NSY2 213 aa12.09□□□□□ -0.47
VAPB-203ENST00000463370 KCMF1Q9P0J7 381 aa12.09□□□□□ -0.47
VAPB-203ENST00000463370 ANKMY1Q9P2S6 941 aa12.09□□□□□ -0.47
VAPB-203ENST00000463370 RHCGQ9UBD6 479 aa12.09□□□□□ -0.47
VAPB-203ENST00000463370 KCNE3Q9Y6H6 103 aa12.09□□□□□ -0.47
VAPB-203ENST00000463370 CEPT1Q9Y6K0 416 aa12.09□□□□□ -0.47
VAPB-203ENST00000463370 A0A087WXM4 84 aa12.08□□□□□ -0.47
VAPB-203ENST00000463370 C2orf74A8MZ97 194 aa12.08□□□□□ -0.47
VAPB-203ENST00000463370 C5orf58C9J3I9 102 aa12.08□□□□□ -0.47
VAPB-203ENST00000463370 H0YGG7 62 aa12.08□□□□□ -0.47
VAPB-203ENST00000463370 TNFRSF11BO00300 401 aa12.08□□□□□ -0.47
VAPB-203ENST00000463370 BCKDKO14874 412 aa12.08□□□□□ -0.47
VAPB-203ENST00000463370 SLC16A6O15403 523 aa12.08□□□□□ -0.47
VAPB-203ENST00000463370 DPM1O60762 260 aa12.08□□□□□ -0.47
VAPB-203ENST00000463370 MFN2O95140 757 aa12.08□□□□□ -0.47
VAPB-203ENST00000463370 HMGN2P05204 90 aaKnown RBP12.08□□□□□ -0.47
VAPB-203ENST00000463370 MC3RP41968 323 aa12.08□□□□□ -0.47
VAPB-203ENST00000463370 TSFMP43897 325 aaKnown RBP12.08□□□□□ -0.47
VAPB-203ENST00000463370 RAD23AP54725 363 aa12.08□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms