RNA–Protein interactions for RNA: ENST00000462165.2

CBX3-205, Transcript of chromobox 3, humanhuman

TSL 3

Gene CBX3, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-205ENST00000462165 MBD3L3A6NE82 208 aaPredicted RBP9.95□□□□□ -0.82
CBX3-205ENST00000462165 MBD3L5A6NJ08 208 aaPredicted RBP9.95□□□□□ -0.82
CBX3-205ENST00000462165 CD8B2A6NJW9 211 aa9.95□□□□□ -0.82
CBX3-205ENST00000462165 KIAA1324LA8MWY0 1029 aaPredicted RBP9.95□□□□□ -0.82
CBX3-205ENST00000462165 ARHGEF9O43307 516 aa9.95□□□□□ -0.82
CBX3-205ENST00000462165 BANF1O75531 89 aa9.95□□□□□ -0.82
CBX3-205ENST00000462165 IL18BPO95998 194 aa9.95□□□□□ -0.82
CBX3-205ENST00000462165 FBXO45P0C2W1 286 aa9.95□□□□□ -0.82
CBX3-205ENST00000462165 COX7A2P14406 83 aa9.95□□□□□ -0.82
CBX3-205ENST00000462165 CTSSP25774 331 aa9.95□□□□□ -0.82
CBX3-205ENST00000462165 GDF1P27539 372 aa9.95□□□□□ -0.82
CBX3-205ENST00000462165 SERPINB3P29508 390 aa9.95□□□□□ -0.82
CBX3-205ENST00000462165 OPRM1P35372 400 aa9.95□□□□□ -0.82
CBX3-205ENST00000462165 STT3AP46977 705 aa9.95□□□□□ -0.82
CBX3-205ENST00000462165 ID2Q02363 134 aa9.95□□□□□ -0.82
CBX3-205ENST00000462165 BIKQ13323 160 aa9.95□□□□□ -0.82
CBX3-205ENST00000462165 NTRK2Q16620 822 aa9.95□□□□□ -0.82
CBX3-205ENST00000462165 VASNQ6EMK4 673 aa9.95□□□□□ -0.82
CBX3-205ENST00000462165 FRA10AC1Q70Z53 315 aa9.95□□□□□ -0.82
CBX3-205ENST00000462165 UBE3DQ7Z6J8 389 aa9.95□□□□□ -0.82
CBX3-205ENST00000462165 ADAMTSL2Q86TH1 951 aa9.95□□□□□ -0.82
CBX3-205ENST00000462165 CXorf67Q86X51 503 aaPredicted RBP9.95□□□□□ -0.82
CBX3-205ENST00000462165 FAM13CQ8NE31 585 aa9.95□□□□□ -0.82
CBX3-205ENST00000462165 SRFBP1Q8NEF9 429 aaKnown RBP9.95□□□□□ -0.82
CBX3-205ENST00000462165 MBD3L2Q8NHZ7 208 aaPredicted RBP9.95□□□□□ -0.82
CBX3-205ENST00000462165 WDR34Q96EX3 536 aa9.95□□□□□ -0.82
CBX3-205ENST00000462165 ART5Q96L15 291 aa9.95□□□□□ -0.82
CBX3-205ENST00000462165 JSRP1Q96MG2 331 aaPredicted RBP9.95□□□□□ -0.82
CBX3-205ENST00000462165 F2RL3Q96RI0 385 aa9.95□□□□□ -0.82
CBX3-205ENST00000462165 WDR83Q9BRX9 315 aaKnown RBP9.95□□□□□ -0.82
CBX3-205ENST00000462165 YIPF4Q9BSR8 244 aa9.95□□□□□ -0.82
CBX3-205ENST00000462165 TBCDQ9BTW9 1192 aa9.95□□□□□ -0.82
CBX3-205ENST00000462165 DOHHQ9BU89 302 aa9.95□□□□□ -0.82
CBX3-205ENST00000462165 RBSNQ9H1K0 784 aa9.95□□□□□ -0.82
CBX3-205ENST00000462165 PLAC1Q9HBJ0 212 aa9.95□□□□□ -0.82
CBX3-205ENST00000462165 PPANQ9NQ55 473 aaKnown RBP9.95□□□□□ -0.82
CBX3-205ENST00000462165 SPACA6W5XKT8 324 aa9.95□□□□□ -0.82
CBX3-205ENST00000462165 ARID1AO14497 2285 aa9.94□□□□□ -0.82
CBX3-205ENST00000462165 CLGNO14967 610 aa9.94□□□□□ -0.82
CBX3-205ENST00000462165 DYRK3O43781 588 aa9.94□□□□□ -0.82
CBX3-205ENST00000462165 FGF17O60258 216 aa9.94□□□□□ -0.82
CBX3-205ENST00000462165 PRAMEF4O60810 478 aa9.94□□□□□ -0.82
CBX3-205ENST00000462165 TRIM3O75382 744 aaPredicted RBP9.94□□□□□ -0.82
CBX3-205ENST00000462165 SCELO95171 688 aa9.94□□□□□ -0.82
CBX3-205ENST00000462165 HPNP05981 417 aa9.94□□□□□ -0.82
CBX3-205ENST00000462165 ATP5A1P25705 553 aaKnown RBP9.94□□□□□ -0.82
CBX3-205ENST00000462165 MSH2P43246 934 aa9.94□□□□□ -0.82
CBX3-205ENST00000462165 TSNQ15631 228 aaKnown RBP9.94□□□□□ -0.82
CBX3-205ENST00000462165 MSS51Q4VC12 460 aa9.94□□□□□ -0.82
CBX3-205ENST00000462165 NHSL2Q5HYW2 709 aa9.94□□□□□ -0.82
CBX3-205ENST00000462165 TBCELQ5QJ74 424 aa9.94□□□□□ -0.82
CBX3-205ENST00000462165 PRAMEF9Q5VWM5 478 aa9.94□□□□□ -0.82
CBX3-205ENST00000462165 DGAT2L6Q6ZPD8 337 aa9.94□□□□□ -0.82
CBX3-205ENST00000462165 SYDE1Q6ZW31 735 aaPredicted RBP9.94□□□□□ -0.82
CBX3-205ENST00000462165 IGDCC3Q8IVU1 814 aa9.94□□□□□ -0.82
CBX3-205ENST00000462165 LRRC75A-AS1Q8N1F1 130 aa9.94□□□□□ -0.82
CBX3-205ENST00000462165 ACOT4Q8N9L9 421 aa9.94□□□□□ -0.82
CBX3-205ENST00000462165 BBOF1Q8ND07 529 aa9.94□□□□□ -0.82
CBX3-205ENST00000462165 SPATA3Q8NHX4 192 aa9.94□□□□□ -0.82
CBX3-205ENST00000462165 ANKRD49Q8WVL7 239 aa9.94□□□□□ -0.82
CBX3-205ENST00000462165 SMPDL3BQ92485 455 aa9.94□□□□□ -0.82
CBX3-205ENST00000462165 PTCD3Q96EY7 689 aaKnown RBP9.94□□□□□ -0.82
CBX3-205ENST00000462165 FBXL20Q96IG2 436 aa9.94□□□□□ -0.82
CBX3-205ENST00000462165 ZNF597Q96LX8 424 aa9.94□□□□□ -0.82
CBX3-205ENST00000462165 DACH2Q96NX9 599 aa9.94□□□□□ -0.82
CBX3-205ENST00000462165 DGAT2Q96PD7 388 aa9.94□□□□□ -0.82
CBX3-205ENST00000462165 PIP5K1AQ99755 562 aa9.94□□□□□ -0.82
CBX3-205ENST00000462165 MS4A8Q9BY19 250 aa9.94□□□□□ -0.82
CBX3-205ENST00000462165 UBQLN3Q9H347 655 aa9.94□□□□□ -0.82
CBX3-205ENST00000462165 CALHM2Q9HA72 323 aa9.94□□□□□ -0.82
CBX3-205ENST00000462165 LZTFL1Q9NQ48 299 aa9.94□□□□□ -0.82
CBX3-205ENST00000462165 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.94□□□□□ -0.82
CBX3-205ENST00000462165 CTNNAL1Q9UBT7 734 aa9.94□□□□□ -0.82
CBX3-205ENST00000462165 CAMK2AQ9UQM7 478 aa9.94□□□□□ -0.82
CBX3-205ENST00000462165 CSPG4Q6UVK1 2322 aa9.94□□□□□ -0.82
CBX3-205ENST00000462165 MED12LQ86YW9 2145 aa9.94□□□□□ -0.82
CBX3-205ENST00000462165 EEF1E1-BLOC1S5C9J1V9 151 aa9.93□□□□□ -0.82
CBX3-205ENST00000462165 HRKO00198 91 aa9.93□□□□□ -0.82
CBX3-205ENST00000462165 RTCAO00442 366 aaKnown RBP9.93□□□□□ -0.82
CBX3-205ENST00000462165 TAPBPO15533 448 aa9.93□□□□□ -0.82
CBX3-205ENST00000462165 EEF1E1O43324 174 aaKnown RBP9.93□□□□□ -0.82
CBX3-205ENST00000462165 LRATO95237 230 aa9.93□□□□□ -0.82
CBX3-205ENST00000462165 CD22P20273 847 aa9.93□□□□□ -0.82
CBX3-205ENST00000462165 HIST1H1TP22492 207 aaPredicted RBP9.93□□□□□ -0.82
CBX3-205ENST00000462165 CPN2P22792 545 aa9.93□□□□□ -0.82
CBX3-205ENST00000462165 CDC25BP30305 580 aa9.93□□□□□ -0.82
CBX3-205ENST00000462165 GGT5P36269 586 aa9.93□□□□□ -0.82
CBX3-205ENST00000462165 RPL21P46778 160 aaKnown RBP9.93□□□□□ -0.82
CBX3-205ENST00000462165 CDK9P50750 372 aaKnown RBP9.93□□□□□ -0.82
CBX3-205ENST00000462165 AGFG1P52594 562 aaKnown RBP9.93□□□□□ -0.82
CBX3-205ENST00000462165 PLIN5Q00G26 463 aa9.93□□□□□ -0.82
CBX3-205ENST00000462165 LAPTM5Q13571 262 aa9.93□□□□□ -0.82
CBX3-205ENST00000462165 DOC2AQ14183 400 aa9.93□□□□□ -0.82
CBX3-205ENST00000462165 ZNF460Q14592 562 aa9.93□□□□□ -0.82
CBX3-205ENST00000462165 EBPQ15125 230 aaKnown RBP9.93□□□□□ -0.82
CBX3-205ENST00000462165 POU4F3Q15319 338 aa9.93□□□□□ -0.82
CBX3-205ENST00000462165 TGFBIQ15582 683 aa9.93□□□□□ -0.82
CBX3-205ENST00000462165 Q5PR19 223 aa9.93□□□□□ -0.82
CBX3-205ENST00000462165 TRMT10BQ6PF06 316 aaKnown RBP9.93□□□□□ -0.82
CBX3-205ENST00000462165 CXXC5Q7LFL8 322 aaKnown RBP9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms