RNA–Protein interactions for RNA: ENST00000461228.1

DNMT3A-207, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 5

Gene DNMT3A, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-207ENST00000461228 MBD3L5A6NJ08 208 aaPredicted RBP13.38□□□□□ -0.27
DNMT3A-207ENST00000461228 E7ESA3 106 aa13.38□□□□□ -0.27
DNMT3A-207ENST00000461228 ETHE1O95571 254 aa13.38□□□□□ -0.27
DNMT3A-207ENST00000461228 CD22P20273 847 aa13.38□□□□□ -0.27
DNMT3A-207ENST00000461228 TAS2R39P59534 338 aa13.38□□□□□ -0.27
DNMT3A-207ENST00000461228 ATP6V0D1P61421 351 aa13.38□□□□□ -0.27
DNMT3A-207ENST00000461228 POU4F1Q01851 419 aa13.38□□□□□ -0.27
DNMT3A-207ENST00000461228 TNFRSF17Q02223 184 aa13.38□□□□□ -0.27
DNMT3A-207ENST00000461228 EBPQ15125 230 aaKnown RBP13.38□□□□□ -0.27
DNMT3A-207ENST00000461228 RPS6KA2Q15349 733 aa13.38□□□□□ -0.27
DNMT3A-207ENST00000461228 KCTD19Q17RG1 926 aaPredicted RBP13.38□□□□□ -0.27
DNMT3A-207ENST00000461228 SULT1C3Q6IMI6 304 aa13.38□□□□□ -0.27
DNMT3A-207ENST00000461228 TMEM81Q6P7N7 255 aa13.38□□□□□ -0.27
DNMT3A-207ENST00000461228 LIX1Q8N485 282 aa13.38□□□□□ -0.27
DNMT3A-207ENST00000461228 ZNF321PQ8N8H1 164 aa13.38□□□□□ -0.27
DNMT3A-207ENST00000461228 NAXEQ8NCW5 288 aa13.38□□□□□ -0.27
DNMT3A-207ENST00000461228 MBD3L2Q8NHZ7 208 aaPredicted RBP13.38□□□□□ -0.27
DNMT3A-207ENST00000461228 ZNF473Q8WTR7 871 aaKnown RBP13.38□□□□□ -0.27
DNMT3A-207ENST00000461228 UBTD2Q8WUN7 234 aa13.38□□□□□ -0.27
DNMT3A-207ENST00000461228 SMPDL3BQ92485 455 aa13.38□□□□□ -0.27
DNMT3A-207ENST00000461228 ANKRD9Q96BM1 317 aaPredicted RBP13.38□□□□□ -0.27
DNMT3A-207ENST00000461228 RUNDC3BQ96NL0 473 aa13.38□□□□□ -0.27
DNMT3A-207ENST00000461228 DGAT2Q96PD7 388 aa13.38□□□□□ -0.27
DNMT3A-207ENST00000461228 BEX4Q9NWD9 120 aaPredicted RBP13.38□□□□□ -0.27
DNMT3A-207ENST00000461228 WWOXQ9NZC7 414 aa13.38□□□□□ -0.27
DNMT3A-207ENST00000461228 FETUBQ9UGM5 382 aa13.38□□□□□ -0.27
DNMT3A-207ENST00000461228 PHF11Q9UIL8 331 aa13.38□□□□□ -0.27
DNMT3A-207ENST00000461228 CNOT11Q9UKZ1 510 aaKnown RBP13.38□□□□□ -0.27
DNMT3A-207ENST00000461228 CHMP2BQ9UQN3 213 aa13.38□□□□□ -0.27
DNMT3A-207ENST00000461228 PLEKHA6Q9Y2H5 1048 aa13.38□□□□□ -0.27
DNMT3A-207ENST00000461228 PSAT1Q9Y617 370 aa13.38□□□□□ -0.27
DNMT3A-207ENST00000461228 G3V3Y1 287 aa13.37□□□□□ -0.27
DNMT3A-207ENST00000461228 FGF17O60258 216 aa13.37□□□□□ -0.27
DNMT3A-207ENST00000461228 PRAMEF4O60810 478 aa13.37□□□□□ -0.27
DNMT3A-207ENST00000461228 LDB3O75112 727 aa13.37□□□□□ -0.27
DNMT3A-207ENST00000461228 TRIM3O75382 744 aaPredicted RBP13.37□□□□□ -0.27
DNMT3A-207ENST00000461228 BANF1O75531 89 aa13.37□□□□□ -0.27
DNMT3A-207ENST00000461228 STK16O75716 305 aa13.37□□□□□ -0.27
DNMT3A-207ENST00000461228 SNX4O95219 450 aa13.37□□□□□ -0.27
DNMT3A-207ENST00000461228 C1QAP02745 245 aa13.37□□□□□ -0.27
DNMT3A-207ENST00000461228 HPNP05981 417 aa13.37□□□□□ -0.27
DNMT3A-207ENST00000461228 EPXP11678 715 aa13.37□□□□□ -0.27
DNMT3A-207ENST00000461228 TACR1P25103 407 aa13.37□□□□□ -0.27
DNMT3A-207ENST00000461228 HOXC12P31275 282 aa13.37□□□□□ -0.27
DNMT3A-207ENST00000461228 UQCRC1P31930 480 aa13.37□□□□□ -0.27
DNMT3A-207ENST00000461228 ELK3P41970 407 aa13.37□□□□□ -0.27
DNMT3A-207ENST00000461228 DGKQP52824 942 aa13.37□□□□□ -0.27
DNMT3A-207ENST00000461228 ASPHQ12797 758 aa13.37□□□□□ -0.27
DNMT3A-207ENST00000461228 DOC2AQ14183 400 aa13.37□□□□□ -0.27
DNMT3A-207ENST00000461228 PRAMEF9Q5VWM5 478 aa13.37□□□□□ -0.27
DNMT3A-207ENST00000461228 SLC29A4Q7RTT9 530 aa13.37□□□□□ -0.27
DNMT3A-207ENST00000461228 UBE3DQ7Z6J8 389 aa13.37□□□□□ -0.27
DNMT3A-207ENST00000461228 ZNF441Q8N8Z8 693 aa13.37□□□□□ -0.27
DNMT3A-207ENST00000461228 ANKRD49Q8WVL7 239 aa13.37□□□□□ -0.27
DNMT3A-207ENST00000461228 TANKQ92844 425 aa13.37□□□□□ -0.27
DNMT3A-207ENST00000461228 TSPAN17Q96FV3 270 aa13.37□□□□□ -0.27
DNMT3A-207ENST00000461228 SENP5Q96HI0 755 aaPredicted RBP13.37□□□□□ -0.27
DNMT3A-207ENST00000461228 MS4A14Q96JA4 679 aa13.37□□□□□ -0.27
DNMT3A-207ENST00000461228 C18orf12Q96KH6 178 aa13.37□□□□□ -0.27
DNMT3A-207ENST00000461228 MAPKAP1Q9BPZ7 522 aa13.37□□□□□ -0.27
DNMT3A-207ENST00000461228 DOHHQ9BU89 302 aa13.37□□□□□ -0.27
DNMT3A-207ENST00000461228 WWTR1Q9GZV5 400 aa13.37□□□□□ -0.27
DNMT3A-207ENST00000461228 EXO5Q9H790 373 aa13.37□□□□□ -0.27
DNMT3A-207ENST00000461228 LIN28AQ9H9Z2 209 aaKnown RBP13.37□□□□□ -0.27
DNMT3A-207ENST00000461228 PROK2Q9HC23 129 aa13.37□□□□□ -0.27
DNMT3A-207ENST00000461228 SEMA4BQ9NPR2 832 aaPredicted RBP13.37□□□□□ -0.27
DNMT3A-207ENST00000461228 ZNF490Q9ULM2 529 aaPredicted RBP13.37□□□□□ -0.27
DNMT3A-207ENST00000461228 PPP2R2CQ9Y2T4 447 aa13.37□□□□□ -0.27
DNMT3A-207ENST00000461228 CSPG4Q6UVK1 2322 aa13.36□□□□□ -0.27
DNMT3A-207ENST00000461228 CCDC189A1A4V9 331 aa13.36□□□□□ -0.27
DNMT3A-207ENST00000461228 TUBAL3A6NHL2 446 aa13.36□□□□□ -0.27
DNMT3A-207ENST00000461228 CAPN14A8MX76 684 aa13.36□□□□□ -0.27
DNMT3A-207ENST00000461228 IL2RAP01589 272 aa13.36□□□□□ -0.27
DNMT3A-207ENST00000461228 RFPL3SP0C7P2 107 aa13.36□□□□□ -0.27
DNMT3A-207ENST00000461228 EPORP19235 508 aa13.36□□□□□ -0.27
DNMT3A-207ENST00000461228 BMP5P22003 454 aa13.36□□□□□ -0.27
DNMT3A-207ENST00000461228 PIGAP37287 484 aa13.36□□□□□ -0.27
DNMT3A-207ENST00000461228 PIK3CBP42338 1070 aa13.36□□□□□ -0.27
DNMT3A-207ENST00000461228 GDF5P43026 501 aa13.36□□□□□ -0.27
DNMT3A-207ENST00000461228 SSR2P43308 183 aa13.36□□□□□ -0.27
DNMT3A-207ENST00000461228 PGGT1BP53609 377 aa13.36□□□□□ -0.27
DNMT3A-207ENST00000461228 ZKSCAN8Q15776 578 aaPredicted RBP13.36□□□□□ -0.27
DNMT3A-207ENST00000461228 HIST2H2ACQ16777 129 aaPredicted RBP13.36□□□□□ -0.27
DNMT3A-207ENST00000461228 KHDRBS2Q5VWX1 349 aaKnown RBP13.36□□□□□ -0.27
DNMT3A-207ENST00000461228 SHEQ5VZ18 495 aa13.36□□□□□ -0.27
DNMT3A-207ENST00000461228 HIST2H2AA3Q6FI13 130 aa13.36□□□□□ -0.27
DNMT3A-207ENST00000461228 ADNP2Q6IQ32 1131 aa13.36□□□□□ -0.27
DNMT3A-207ENST00000461228 CHSY3Q70JA7 882 aa13.36□□□□□ -0.27
DNMT3A-207ENST00000461228 GAS2L3Q86XJ1 694 aa13.36□□□□□ -0.27
DNMT3A-207ENST00000461228 TAGAPQ8N103 731 aa13.36□□□□□ -0.27
DNMT3A-207ENST00000461228 TP53INP1Q96A56 240 aa13.36□□□□□ -0.27
DNMT3A-207ENST00000461228 CMTM7Q96FZ5 175 aa13.36□□□□□ -0.27
DNMT3A-207ENST00000461228 CAPZA3Q96KX2 299 aa13.36□□□□□ -0.27
DNMT3A-207ENST00000461228 OSBPL9Q96SU4 736 aa13.36□□□□□ -0.27
DNMT3A-207ENST00000461228 CENPKQ9BS16 269 aa13.36□□□□□ -0.27
DNMT3A-207ENST00000461228 CNPPD1Q9BV87 410 aa13.36□□□□□ -0.27
DNMT3A-207ENST00000461228 PHACTR1Q9C0D0 580 aa13.36□□□□□ -0.27
DNMT3A-207ENST00000461228 SLC6A15Q9H2J7 730 aa13.36□□□□□ -0.27
DNMT3A-207ENST00000461228 LIME1Q9H400 295 aa13.36□□□□□ -0.27
DNMT3A-207ENST00000461228 RPF2Q9H7B2 306 aaKnown RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms