RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 ZNF385BQ569K4 471 aa14.68□□□□□ -0.06
LMNB1-203ENST00000460265 RPS26P11Q5JNZ5 115 aaPredicted RBP14.68□□□□□ -0.06
LMNB1-203ENST00000460265 C9orf64Q5T6V5 341 aa14.68□□□□□ -0.06
LMNB1-203ENST00000460265 SYCE2Q6PIF2 218 aa14.68□□□□□ -0.06
LMNB1-203ENST00000460265 LGI4Q8N135 537 aa14.68□□□□□ -0.06
LMNB1-203ENST00000460265 IL4I1Q96RQ9 567 aa14.68□□□□□ -0.06
LMNB1-203ENST00000460265 SLC6A16Q9GZN6 736 aa14.68□□□□□ -0.06
LMNB1-203ENST00000460265 SAGE1Q9NXZ1 904 aa14.68□□□□□ -0.06
LMNB1-203ENST00000460265 WASHC1A8K0Z3 465 aa14.68□□□□□ -0.06
LMNB1-203ENST00000460265 RGS10O43665 173 aa14.68□□□□□ -0.06
LMNB1-203ENST00000460265 PTNP21246 168 aa14.68□□□□□ -0.06
LMNB1-203ENST00000460265 PTX3P26022 381 aaPredicted RBP14.68□□□□□ -0.06
LMNB1-203ENST00000460265 P2RY2P41231 377 aa14.68□□□□□ -0.06
LMNB1-203ENST00000460265 DAPP51397 102 aa14.68□□□□□ -0.06
LMNB1-203ENST00000460265 TAGLNQ01995 201 aaKnown RBP14.68□□□□□ -0.06
LMNB1-203ENST00000460265 BCL7AQ4VC05 210 aa14.68□□□□□ -0.06
LMNB1-203ENST00000460265 KIAA1324Q6UXG2 1013 aaKnown RBP14.68□□□□□ -0.06
LMNB1-203ENST00000460265 WASH2PQ6VEQ5 465 aa14.68□□□□□ -0.06
LMNB1-203ENST00000460265 OLIG3Q7RTU3 272 aa14.68□□□□□ -0.06
LMNB1-203ENST00000460265 UBQLNLQ8IYU4 475 aa14.68□□□□□ -0.06
LMNB1-203ENST00000460265 NLGN4XQ8N0W4 816 aa14.68□□□□□ -0.06
LMNB1-203ENST00000460265 WDR20Q8TBZ3 569 aa14.68□□□□□ -0.06
LMNB1-203ENST00000460265 UBASH3BQ8TF42 649 aa14.68□□□□□ -0.06
LMNB1-203ENST00000460265 ST6GAL2Q96JF0 529 aa14.68□□□□□ -0.06
LMNB1-203ENST00000460265 CCDC115Q96NT0 180 aa14.68□□□□□ -0.06
LMNB1-203ENST00000460265 BCL7BQ9BQE9 202 aa14.68□□□□□ -0.06
LMNB1-203ENST00000460265 TMEM45AQ9NWC5 275 aa14.68□□□□□ -0.06
LMNB1-203ENST00000460265 CORO2BQ9UQ03 480 aa14.68□□□□□ -0.06
LMNB1-203ENST00000460265 ANGPT4Q9Y264 503 aa14.68□□□□□ -0.06
LMNB1-203ENST00000460265 ANAPC1Q9H1A4 1944 aa14.68□□□□□ -0.06
LMNB1-203ENST00000460265 SCN3AQ9NY46 2000 aa14.68□□□□□ -0.06
LMNB1-203ENST00000460265 KCNE1BA0A087WTH5 132 aa14.68□□□□□ -0.06
LMNB1-203ENST00000460265 TRBC2A0A5B9 178 aa14.68□□□□□ -0.06
LMNB1-203ENST00000460265 H0YIV9 168 aa14.68□□□□□ -0.06
LMNB1-203ENST00000460265 TSPAN4O14817 238 aa14.68□□□□□ -0.06
LMNB1-203ENST00000460265 SOX14O95416 240 aa14.68□□□□□ -0.06
LMNB1-203ENST00000460265 ITGB7P26010 798 aa14.68□□□□□ -0.06
LMNB1-203ENST00000460265 PNCKQ6P2M8 343 aa14.68□□□□□ -0.06
LMNB1-203ENST00000460265 EIF3MQ7L2H7 374 aaKnown RBP14.68□□□□□ -0.06
LMNB1-203ENST00000460265 FYTTD1Q96QD9 318 aaKnown RBP14.68□□□□□ -0.06
LMNB1-203ENST00000460265 ABCG4Q9H172 646 aa14.68□□□□□ -0.06
LMNB1-203ENST00000460265 ZBTB20Q9HC78 741 aaPredicted RBP14.68□□□□□ -0.06
LMNB1-203ENST00000460265 RANGRFQ9HD47 186 aaPredicted RBP14.68□□□□□ -0.06
LMNB1-203ENST00000460265 CABIN1Q9Y6J0 2220 aa14.67□□□□□ -0.06
LMNB1-203ENST00000460265 OR6C70A6NIJ9 312 aa14.67□□□□□ -0.06
LMNB1-203ENST00000460265 ARHGAP33O14559 1287 aa14.67□□□□□ -0.06
LMNB1-203ENST00000460265 NME6O75414 186 aaPredicted RBP14.67□□□□□ -0.06
LMNB1-203ENST00000460265 APODP05090 189 aa14.67□□□□□ -0.06
LMNB1-203ENST00000460265 BUD31P41223 144 aaPredicted RBP14.67□□□□□ -0.06
LMNB1-203ENST00000460265 TMEM31Q5JXX7 168 aa14.67□□□□□ -0.06
LMNB1-203ENST00000460265 SERPINA11Q86U17 422 aa14.67□□□□□ -0.06
LMNB1-203ENST00000460265 OR9Q2Q8NGE9 314 aa14.67□□□□□ -0.06
LMNB1-203ENST00000460265 OR10G6Q8NH81 332 aa14.67□□□□□ -0.06
LMNB1-203ENST00000460265 ZNF300Q96RE9 604 aaPredicted RBP14.67□□□□□ -0.06
LMNB1-203ENST00000460265 CRISPLD2Q9H0B8 497 aa14.67□□□□□ -0.06
LMNB1-203ENST00000460265 DMRT3Q9NQL9 472 aa14.67□□□□□ -0.06
LMNB1-203ENST00000460265 PHPT1Q9NRX4 125 aaPredicted RBP14.67□□□□□ -0.06
LMNB1-203ENST00000460265 SEC14L3Q9UDX4 400 aa14.67□□□□□ -0.06
LMNB1-203ENST00000460265 PCDHGB6Q9Y5F9 930 aa14.67□□□□□ -0.06
LMNB1-203ENST00000460265 PNMA8CA0A1B0GUJ8 204 aa14.67□□□□□ -0.06
LMNB1-203ENST00000460265 TSC22D2O75157 780 aa14.67□□□□□ -0.06
LMNB1-203ENST00000460265 GADD45GO95257 159 aa14.67□□□□□ -0.06
LMNB1-203ENST00000460265 PSKH1P11801 424 aa14.67□□□□□ -0.06
LMNB1-203ENST00000460265 CTRB1P17538 263 aa14.67□□□□□ -0.06
LMNB1-203ENST00000460265 TNNI3P19429 210 aa14.67□□□□□ -0.06
LMNB1-203ENST00000460265 PCMT1P22061 227 aa14.67□□□□□ -0.06
LMNB1-203ENST00000460265 SLC15A1P46059 708 aa14.67□□□□□ -0.06
LMNB1-203ENST00000460265 ZNF45Q02386 682 aa14.67□□□□□ -0.06
LMNB1-203ENST00000460265 RUNX3Q13761 415 aa14.67□□□□□ -0.06
LMNB1-203ENST00000460265 TEAD4Q15561 434 aa14.67□□□□□ -0.06
LMNB1-203ENST00000460265 Q5BKY6 102 aa14.67□□□□□ -0.06
LMNB1-203ENST00000460265 LRIF1Q5T3J3 769 aa14.67□□□□□ -0.06
LMNB1-203ENST00000460265 CTRB2Q6GPI1 263 aa14.67□□□□□ -0.06
LMNB1-203ENST00000460265 NRARPQ7Z6K4 114 aa14.67□□□□□ -0.06
LMNB1-203ENST00000460265 DCUN1D3Q8IWE4 304 aa14.67□□□□□ -0.06
LMNB1-203ENST00000460265 COL21A1Q96P44 957 aa14.67□□□□□ -0.06
LMNB1-203ENST00000460265 DOHHQ9BU89 302 aa14.67□□□□□ -0.06
LMNB1-203ENST00000460265 PLEKHM1Q9Y4G2 1056 aa14.67□□□□□ -0.06
LMNB1-203ENST00000460265 LOC110117498-PIK3R3F6TDL0 507 aa14.67□□□□□ -0.06
LMNB1-203ENST00000460265 AIREO43918 545 aa14.67□□□□□ -0.06
LMNB1-203ENST00000460265 PRMT3O60678 531 aa14.67□□□□□ -0.06
LMNB1-203ENST00000460265 CYP7B1O75881 506 aa14.67□□□□□ -0.06
LMNB1-203ENST00000460265 C9P02748 559 aa14.67□□□□□ -0.06
LMNB1-203ENST00000460265 MT-ND2P03891 347 aa14.67□□□□□ -0.06
LMNB1-203ENST00000460265 ALDH6A1Q02252 535 aaKnown RBP14.67□□□□□ -0.06
LMNB1-203ENST00000460265 NPRL3Q12980 569 aa14.67□□□□□ -0.06
LMNB1-203ENST00000460265 SLC5A8Q8N695 610 aa14.67□□□□□ -0.06
LMNB1-203ENST00000460265 OR56A3Q8NH54 315 aa14.67□□□□□ -0.06
LMNB1-203ENST00000460265 COPS4Q9BT78 406 aa14.67□□□□□ -0.06
LMNB1-203ENST00000460265 ZCCHC3Q9NUD5 404 aaKnown RBP14.67□□□□□ -0.06
LMNB1-203ENST00000460265 ERVK13-1Q9NX77 482 aa14.67□□□□□ -0.06
LMNB1-203ENST00000460265 PPM1DO15297 605 aa14.66□□□□□ -0.06
LMNB1-203ENST00000460265 DNTTP04053 509 aa14.66□□□□□ -0.06
LMNB1-203ENST00000460265 IL7P13232 177 aa14.66□□□□□ -0.06
LMNB1-203ENST00000460265 HEPACAMQ14CZ8 416 aa14.66□□□□□ -0.06
LMNB1-203ENST00000460265 MED22Q15528 200 aa14.66□□□□□ -0.06
LMNB1-203ENST00000460265 GPAT3Q53EU6 434 aa14.66□□□□□ -0.06
LMNB1-203ENST00000460265 CDH24Q86UP0 819 aa14.66□□□□□ -0.06
LMNB1-203ENST00000460265 MBOAT4Q96T53 435 aa14.66□□□□□ -0.06
LMNB1-203ENST00000460265 C11orf16Q9NQ32 467 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms