RNA–Protein interactions for RNA: ENST00000459894.6

SFXN2-202, Transcript of sideroflexin 2, humanhuman

TSL 2

Gene SFXN2, Length 2,324 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN2-202ENST00000459894 USP30Q70CQ3 517 aa13.63□□□□□ -0.23
SFXN2-202ENST00000459894 DDX53Q86TM3 631 aaKnown RBP13.63□□□□□ -0.23
SFXN2-202ENST00000459894 GPR65Q8IYL9 337 aa13.63□□□□□ -0.23
SFXN2-202ENST00000459894 HORMAD2Q8N7B1 307 aa13.63□□□□□ -0.23
SFXN2-202ENST00000459894 OR2A12Q8NGT7 310 aa13.63□□□□□ -0.23
SFXN2-202ENST00000459894 SLC5A11Q8WWX8 675 aa13.63□□□□□ -0.23
SFXN2-202ENST00000459894 UBE2E3Q969T4 207 aa13.63□□□□□ -0.23
SFXN2-202ENST00000459894 TMEM19Q96HH6 336 aa13.63□□□□□ -0.23
SFXN2-202ENST00000459894 DIRAS2Q96HU8 199 aa13.63□□□□□ -0.23
SFXN2-202ENST00000459894 PPP1R16AQ96I34 528 aa13.63□□□□□ -0.23
SFXN2-202ENST00000459894 ZNF354BQ96LW1 612 aa13.63□□□□□ -0.23
SFXN2-202ENST00000459894 FRMD6Q96NE9 622 aa13.63□□□□□ -0.23
SFXN2-202ENST00000459894 POLDIP3Q9BY77 421 aaKnown RBP13.63□□□□□ -0.23
SFXN2-202ENST00000459894 C11orf54Q9H0W9 315 aaPredicted RBP13.63□□□□□ -0.23
SFXN2-202ENST00000459894 RNF121Q9H920 327 aa13.63□□□□□ -0.23
SFXN2-202ENST00000459894 PLEKHB1Q9UF11 243 aaPredicted RBP13.63□□□□□ -0.23
SFXN2-202ENST00000459894 ACAD8Q9UKU7 415 aa13.63□□□□□ -0.23
SFXN2-202ENST00000459894 LINC00854A0A1B0GVQ3 168 aa13.63□□□□□ -0.23
SFXN2-202ENST00000459894 STK25O00506 426 aa13.63□□□□□ -0.23
SFXN2-202ENST00000459894 PLD2O14939 933 aa13.63□□□□□ -0.23
SFXN2-202ENST00000459894 TMCC2O75069 709 aa13.63□□□□□ -0.23
SFXN2-202ENST00000459894 SEMA7AO75326 666 aa13.63□□□□□ -0.23
SFXN2-202ENST00000459894 MSL3P1P0C860 447 aa13.63□□□□□ -0.23
SFXN2-202ENST00000459894 RECQLP46063 649 aaPredicted RBP13.63□□□□□ -0.23
SFXN2-202ENST00000459894 DAB2P98082 770 aa13.63□□□□□ -0.23
SFXN2-202ENST00000459894 MXD1Q05195 221 aa13.63□□□□□ -0.23
SFXN2-202ENST00000459894 YIF1BQ5BJH7 314 aa13.63□□□□□ -0.23
SFXN2-202ENST00000459894 TMEM220Q6QAJ8 160 aa13.63□□□□□ -0.23
SFXN2-202ENST00000459894 PAQR6Q6TCH4 344 aa13.63□□□□□ -0.23
SFXN2-202ENST00000459894 GAREM2Q75VX8 874 aa13.63□□□□□ -0.23
SFXN2-202ENST00000459894 WDR53Q7Z5U6 358 aaPredicted RBP13.63□□□□□ -0.23
SFXN2-202ENST00000459894 NATD1Q8N6N6 113 aa13.63□□□□□ -0.23
SFXN2-202ENST00000459894 OR5P2Q8WZ92 322 aa13.63□□□□□ -0.23
SFXN2-202ENST00000459894 AP3S1Q92572 193 aa13.63□□□□□ -0.23
SFXN2-202ENST00000459894 TRIM63Q969Q1 353 aa13.63□□□□□ -0.23
SFXN2-202ENST00000459894 RIPOR3Q96MK2 946 aa13.63□□□□□ -0.23
SFXN2-202ENST00000459894 FUZQ9BT04 418 aa13.63□□□□□ -0.23
SFXN2-202ENST00000459894 OBSL1O75147 1896 aa13.62□□□□□ -0.23
SFXN2-202ENST00000459894 RB1P06400 928 aa13.62□□□□□ -0.23
SFXN2-202ENST00000459894 HLA-DMAP28067 261 aa13.62□□□□□ -0.23
SFXN2-202ENST00000459894 KCNJ5P48544 419 aa13.62□□□□□ -0.23
SFXN2-202ENST00000459894 COX10Q12887 443 aa13.62□□□□□ -0.23
SFXN2-202ENST00000459894 TARDBPQ13148 414 aaKnown RBP eCLIP13.62□□□□□ -0.23
SFXN2-202ENST00000459894 TSTA3Q13630 321 aaPredicted RBP13.62□□□□□ -0.23
SFXN2-202ENST00000459894 ZNF438Q7Z4V0 828 aa13.62□□□□□ -0.23
SFXN2-202ENST00000459894 OR52I1Q8NGK6 324 aa13.62□□□□□ -0.23
SFXN2-202ENST00000459894 KCTD7Q96MP8 289 aa13.62□□□□□ -0.23
SFXN2-202ENST00000459894 ZIC5Q96T25 663 aa13.62□□□□□ -0.23
SFXN2-202ENST00000459894 RANGRFQ9HD47 186 aaPredicted RBP13.62□□□□□ -0.23
SFXN2-202ENST00000459894 SEMA3GQ9NS98 782 aa13.62□□□□□ -0.23
SFXN2-202ENST00000459894 TVP23BQ9NYZ1 205 aa13.62□□□□□ -0.23
SFXN2-202ENST00000459894 SPG21Q9NZD8 308 aa13.62□□□□□ -0.23
SFXN2-202ENST00000459894 TESQ9UGI8 421 aaKnown RBP13.62□□□□□ -0.23
SFXN2-202ENST00000459894 NUFIP1Q9UHK0 495 aaKnown RBP13.62□□□□□ -0.23
SFXN2-202ENST00000459894 BOLA1Q9Y3E2 137 aa13.62□□□□□ -0.23
SFXN2-202ENST00000459894 COL4A6Q14031 1691 aa13.62□□□□□ -0.23
SFXN2-202ENST00000459894 LEFTY2O00292 366 aa13.62□□□□□ -0.23
SFXN2-202ENST00000459894 POLR1CO15160 346 aaPredicted RBP13.62□□□□□ -0.23
SFXN2-202ENST00000459894 TP53P04637 393 aaPredicted RBP13.62□□□□□ -0.23
SFXN2-202ENST00000459894 TSPAN19P0C672 248 aa13.62□□□□□ -0.23
SFXN2-202ENST00000459894 PBLDP30039 288 aaPredicted RBP13.62□□□□□ -0.23
SFXN2-202ENST00000459894 ZNF658BQ4V348 819 aaPredicted RBP13.62□□□□□ -0.23
SFXN2-202ENST00000459894 ASTLQ6HA08 431 aaPredicted RBP13.62□□□□□ -0.23
SFXN2-202ENST00000459894 C22orf42Q6IC83 251 aa13.62□□□□□ -0.23
SFXN2-202ENST00000459894 TNFAIP8L2Q6P589 184 aaPredicted RBP13.62□□□□□ -0.23
SFXN2-202ENST00000459894 CD300LDQ6UXZ3 194 aa13.62□□□□□ -0.23
SFXN2-202ENST00000459894 DEF8Q6ZN54 512 aa13.62□□□□□ -0.23
SFXN2-202ENST00000459894 BCDIN3DQ7Z5W3 292 aaKnown RBP13.62□□□□□ -0.23
SFXN2-202ENST00000459894 TECPR1Q7Z6L1 1165 aa13.62□□□□□ -0.23
SFXN2-202ENST00000459894 OR7G1Q8NGA0 311 aa13.62□□□□□ -0.23
SFXN2-202ENST00000459894 OR9A1PQ8NGU1 263 aa13.62□□□□□ -0.23
SFXN2-202ENST00000459894 ZNF607Q96SK3 696 aa13.62□□□□□ -0.23
SFXN2-202ENST00000459894 EPHX3Q9H6B9 360 aa13.62□□□□□ -0.23
SFXN2-202ENST00000459894 MAFFQ9ULX9 164 aa13.62□□□□□ -0.23
SFXN2-202ENST00000459894 TRAV19A0A0A6YYK7 116 aa13.61□□□□□ -0.23
SFXN2-202ENST00000459894 TSPAN11A1L157 253 aa13.61□□□□□ -0.23
SFXN2-202ENST00000459894 TLX2O43763 284 aaPredicted RBP13.61□□□□□ -0.23
SFXN2-202ENST00000459894 PRKYO43930 277 aa13.61□□□□□ -0.23
SFXN2-202ENST00000459894 TIMP2P16035 220 aa13.61□□□□□ -0.23
SFXN2-202ENST00000459894 DDCP20711 480 aa13.61□□□□□ -0.23
SFXN2-202ENST00000459894 OPRD1P41143 372 aa13.61□□□□□ -0.23
SFXN2-202ENST00000459894 CAP1Q01518 475 aa13.61□□□□□ -0.23
SFXN2-202ENST00000459894 PCM1Q15154 2024 aa13.61□□□□□ -0.23
SFXN2-202ENST00000459894 QPRTQ15274 297 aa13.61□□□□□ -0.23
SFXN2-202ENST00000459894 NDUFA9Q16795 377 aa13.61□□□□□ -0.23
SFXN2-202ENST00000459894 PLK5Q496M5 336 aa13.61□□□□□ -0.23
SFXN2-202ENST00000459894 KLHL22Q53GT1 634 aa13.61□□□□□ -0.23
SFXN2-202ENST00000459894 PYDC2Q56P42 97 aa13.61□□□□□ -0.23
SFXN2-202ENST00000459894 C3orf38Q5JPI3 329 aa13.61□□□□□ -0.23
SFXN2-202ENST00000459894 KIAA1211LQ6NV74 962 aa13.61□□□□□ -0.23
SFXN2-202ENST00000459894 LAPTM4BQ86VI4 370 aa13.61□□□□□ -0.23
SFXN2-202ENST00000459894 CACTIN-AS1Q8N1I8 211 aa13.61□□□□□ -0.23
SFXN2-202ENST00000459894 SPNS1Q9H2V7 528 aa13.61□□□□□ -0.23
SFXN2-202ENST00000459894 NEUROD4Q9HD90 331 aa13.61□□□□□ -0.23
SFXN2-202ENST00000459894 ISYNA1Q9NPH2 558 aa13.61□□□□□ -0.23
SFXN2-202ENST00000459894 PLSCR3Q9NRY6 295 aa13.61□□□□□ -0.23
SFXN2-202ENST00000459894 RNF186Q9NXI6 227 aa13.61□□□□□ -0.23
SFXN2-202ENST00000459894 AHSPQ9NZD4 102 aa13.61□□□□□ -0.23
SFXN2-202ENST00000459894 HELZP42694 1942 aaKnown RBP13.61□□□□□ -0.23
SFXN2-202ENST00000459894 IRGMA1A4Y4 181 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms