RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 CHD6Q8TD26 2715 aa9.77□□□□□ -0.85
USP39-210ENST00000459775 A0A1B0GWJ7 208 aa9.77□□□□□ -0.85
USP39-210ENST00000459775 TXNL1O43396 289 aa9.77□□□□□ -0.85
USP39-210ENST00000459775 PCDH7O60245 1069 aa9.77□□□□□ -0.85
USP39-210ENST00000459775 CLN5O75503 358 aa9.77□□□□□ -0.85
USP39-210ENST00000459775 SLC22A3O75751 556 aa9.77□□□□□ -0.85
USP39-210ENST00000459775 ZBTB11O95625 1053 aaPredicted RBP9.77□□□□□ -0.85
USP39-210ENST00000459775 ALBP02768 609 aa9.77□□□□□ -0.85
USP39-210ENST00000459775 PNLIPP16233 465 aa9.77□□□□□ -0.85
USP39-210ENST00000459775 IL1RNP18510 177 aa9.77□□□□□ -0.85
USP39-210ENST00000459775 HRH2P25021 359 aa9.77□□□□□ -0.85
USP39-210ENST00000459775 CERS1P27544 350 aa9.77□□□□□ -0.85
USP39-210ENST00000459775 PDX1P52945 283 aa9.77□□□□□ -0.85
USP39-210ENST00000459775 ODF1Q14990 250 aa9.77□□□□□ -0.85
USP39-210ENST00000459775 VPS26BQ4G0F5 336 aa9.77□□□□□ -0.85
USP39-210ENST00000459775 SPATA19Q7Z5L4 167 aa9.77□□□□□ -0.85
USP39-210ENST00000459775 PDSS2Q86YH6 399 aa9.77□□□□□ -0.85
USP39-210ENST00000459775 CPSF7Q8N684 471 aaKnown RBP9.77□□□□□ -0.85
USP39-210ENST00000459775 DEFB124Q8NES8 71 aa9.77□□□□□ -0.85
USP39-210ENST00000459775 OR5T3Q8NGG3 340 aa9.77□□□□□ -0.85
USP39-210ENST00000459775 RERGQ96A58 199 aaPredicted RBP9.77□□□□□ -0.85
USP39-210ENST00000459775 TCTN2Q96GX1 697 aa9.77□□□□□ -0.85
USP39-210ENST00000459775 GFM1Q96RP9 751 aaKnown RBP9.77□□□□□ -0.85
USP39-210ENST00000459775 MFRPQ9BY79 579 aa9.77□□□□□ -0.85
USP39-210ENST00000459775 PFDN4Q9NQP4 134 aa9.77□□□□□ -0.85
USP39-210ENST00000459775 PRDM7Q9NQW5 492 aa9.77□□□□□ -0.85
USP39-210ENST00000459775 POLE3Q9NRF9 147 aa9.77□□□□□ -0.85
USP39-210ENST00000459775 SDR39U1Q9NRG7 319 aaPredicted RBP9.77□□□□□ -0.85
USP39-210ENST00000459775 NOP53Q9NZM5 478 aaKnown RBP9.77□□□□□ -0.85
USP39-210ENST00000459775 ANKMY1Q9P2S6 941 aa9.77□□□□□ -0.85
USP39-210ENST00000459775 PPT2Q9UMR5 302 aa9.77□□□□□ -0.85
USP39-210ENST00000459775 C19orf53Q9UNZ5 99 aaPredicted RBP9.77□□□□□ -0.85
USP39-210ENST00000459775 EXO1Q9UQ84 846 aaKnown RBP9.77□□□□□ -0.85
USP39-210ENST00000459775 CAPN7Q9Y6W3 813 aa9.77□□□□□ -0.85
USP39-210ENST00000459775 SPTBP11277 2137 aa9.77□□□□□ -0.85
USP39-210ENST00000459775 MDC1Q14676 2089 aaKnown RBP9.76□□□□□ -0.85
USP39-210ENST00000459775 GLOD5A6NK44 160 aa9.76□□□□□ -0.85
USP39-210ENST00000459775 TMEM150CB9EJG8 249 aa9.76□□□□□ -0.85
USP39-210ENST00000459775 NR5A2O00482 541 aa9.76□□□□□ -0.85
USP39-210ENST00000459775 SMNDC1O75940 238 aaKnown RBP eCLIP9.76□□□□□ -0.85
USP39-210ENST00000459775 PRKAR1AP10644 381 aa9.76□□□□□ -0.85
USP39-210ENST00000459775 PRPH2P23942 346 aa9.76□□□□□ -0.85
USP39-210ENST00000459775 TIA1P31483 386 aaKnown RBP eCLIP9.76□□□□□ -0.85
USP39-210ENST00000459775 ARL4DP49703 201 aa9.76□□□□□ -0.85
USP39-210ENST00000459775 ACADVLP49748 655 aa9.76□□□□□ -0.85
USP39-210ENST00000459775 HSD11B2P80365 405 aa9.76□□□□□ -0.85
USP39-210ENST00000459775 GALEQ14376 348 aa9.76□□□□□ -0.85
USP39-210ENST00000459775 SLC9A5Q14940 896 aa9.76□□□□□ -0.85
USP39-210ENST00000459775 C16orf72Q14CZ0 275 aa9.76□□□□□ -0.85
USP39-210ENST00000459775 ADPRMQ3LIE5 342 aa9.76□□□□□ -0.85
USP39-210ENST00000459775 OR4C11Q6IEV9 310 aa9.76□□□□□ -0.85
USP39-210ENST00000459775 TMEM154Q6P9G4 183 aa9.76□□□□□ -0.85
USP39-210ENST00000459775 ABHD17CQ6PCB6 329 aa9.76□□□□□ -0.85
USP39-210ENST00000459775 MIER2Q8N344 545 aa9.76□□□□□ -0.85
USP39-210ENST00000459775 ZNF655Q8N720 491 aaPredicted RBP9.76□□□□□ -0.85
USP39-210ENST00000459775 TRPV3Q8NET8 790 aa9.76□□□□□ -0.85
USP39-210ENST00000459775 OR7A2PQ8NGA2 310 aa9.76□□□□□ -0.85
USP39-210ENST00000459775 OR6S1Q8NH40 331 aa9.76□□□□□ -0.85
USP39-210ENST00000459775 OR1L3Q8NH93 324 aa9.76□□□□□ -0.85
USP39-210ENST00000459775 ENKURQ8TC29 256 aa9.76□□□□□ -0.85
USP39-210ENST00000459775 CEP19Q96LK0 163 aa9.76□□□□□ -0.85
USP39-210ENST00000459775 BCL7BQ9BQE9 202 aa9.76□□□□□ -0.85
USP39-210ENST00000459775 C9orf16Q9BUW7 83 aa9.76□□□□□ -0.85
USP39-210ENST00000459775 PITHD1Q9GZP4 211 aaPredicted RBP9.76□□□□□ -0.85
USP39-210ENST00000459775 TPK1Q9H3S4 243 aa9.76□□□□□ -0.85
USP39-210ENST00000459775 PDE7BQ9NP56 450 aa9.76□□□□□ -0.85
USP39-210ENST00000459775 OCIAD1Q9NX40 245 aa9.76□□□□□ -0.85
USP39-210ENST00000459775 TEX10Q9NXF1 929 aaPredicted RBP9.76□□□□□ -0.85
USP39-210ENST00000459775 TOR4AQ9NXH8 423 aa9.76□□□□□ -0.85
USP39-210ENST00000459775 REV1Q9UBZ9 1251 aa9.76□□□□□ -0.85
USP39-210ENST00000459775 EIF3LQ9Y262 564 aaKnown RBP9.76□□□□□ -0.85
USP39-210ENST00000459775 CBY1Q9Y3M2 126 aa9.76□□□□□ -0.85
USP39-210ENST00000459775 TSC22D4Q9Y3Q8 395 aa9.76□□□□□ -0.85
USP39-210ENST00000459775 D6RAR5 112 aa9.76□□□□□ -0.85
USP39-210ENST00000459775 SGK494L7N484 410 aa9.76□□□□□ -0.85
USP39-210ENST00000459775 NTN3O00634 580 aaPredicted RBP9.76□□□□□ -0.85
USP39-210ENST00000459775 AP3D1O14617 1153 aa9.76□□□□□ -0.85
USP39-210ENST00000459775 THRAP10827 490 aa9.76□□□□□ -0.85
USP39-210ENST00000459775 PRKACAP17612 351 aa9.76□□□□□ -0.85
USP39-210ENST00000459775 NELFEP18615 380 aaKnown RBP9.76□□□□□ -0.85
USP39-210ENST00000459775 ACP1P24666 158 aa9.76□□□□□ -0.85
USP39-210ENST00000459775 PTGER1P34995 402 aa9.76□□□□□ -0.85
USP39-210ENST00000459775 SSR2P43308 183 aa9.76□□□□□ -0.85
USP39-210ENST00000459775 DUSP3P51452 185 aaPredicted RBP9.76□□□□□ -0.85
USP39-210ENST00000459775 FOXL2P58012 376 aa9.76□□□□□ -0.85
USP39-210ENST00000459775 TAS2R50P59544 299 aa9.76□□□□□ -0.85
USP39-210ENST00000459775 PHC1P78364 1004 aa9.76□□□□□ -0.85
USP39-210ENST00000459775 MINDY4Q4G0A6 757 aa9.76□□□□□ -0.85
USP39-210ENST00000459775 CCNYL2Q5T2Q4 361 aa9.76□□□□□ -0.85
USP39-210ENST00000459775 CLEC2AQ6UVW9 174 aa9.76□□□□□ -0.85
USP39-210ENST00000459775 KRT73Q86Y46 540 aa9.76□□□□□ -0.85
USP39-210ENST00000459775 SLITRK4Q8IW52 837 aa9.76□□□□□ -0.85
USP39-210ENST00000459775 TBC1D19Q8N5T2 526 aa9.76□□□□□ -0.85
USP39-210ENST00000459775 OR2L5Q8NG80 312 aa9.76□□□□□ -0.85
USP39-210ENST00000459775 SLC9A6Q92581 669 aa9.76□□□□□ -0.85
USP39-210ENST00000459775 PMEPA1Q969W9 287 aa9.76□□□□□ -0.85
USP39-210ENST00000459775 RGMAQ96B86 450 aa9.76□□□□□ -0.85
USP39-210ENST00000459775 NPAS2Q99743 824 aa9.76□□□□□ -0.85
USP39-210ENST00000459775 CTRCQ99895 268 aa9.76□□□□□ -0.85
USP39-210ENST00000459775 FANCEQ9HB96 536 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms