RNA–Protein interactions for RNA: ENST00000456953.5

SNHG17-208, Transcript of small nucleolar RNA host gene 17, humanhuman

TSL 3 BASIC

Gene SNHG17, Length 546 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG17-208ENST00000456953 BTN3A2P78410 334 aa12.11□□□□□ -0.47
SNHG17-208ENST00000456953 TBL3Q12788 808 aaKnown RBP12.11□□□□□ -0.47
SNHG17-208ENST00000456953 CSHL1Q14406 222 aa12.11□□□□□ -0.47
SNHG17-208ENST00000456953 SLC29A2Q14542 456 aa12.11□□□□□ -0.47
SNHG17-208ENST00000456953 SF3B4Q15427 424 aaKnown RBP eCLIP12.11□□□□□ -0.472e-8■■■■■ 28.1
SNHG17-208ENST00000456953 KBTBD12Q3ZCT8 623 aa12.11□□□□□ -0.47
SNHG17-208ENST00000456953 UBAP2Q5T6F2 1119 aaKnown RBP12.11□□□□□ -0.47
SNHG17-208ENST00000456953 TEDDM1Q5T9Z0 273 aa12.11□□□□□ -0.47
SNHG17-208ENST00000456953 SLC22A10Q63ZE4 541 aa12.11□□□□□ -0.47
SNHG17-208ENST00000456953 NSUN5P2Q63ZY6 315 aa12.11□□□□□ -0.47
SNHG17-208ENST00000456953 DENND6AQ8IWF6 608 aa12.11□□□□□ -0.47
SNHG17-208ENST00000456953 ZNF595Q8IYB9 648 aa12.11□□□□□ -0.47
SNHG17-208ENST00000456953 ANKRD53Q8N9V6 530 aa12.11□□□□□ -0.47
SNHG17-208ENST00000456953 OR5L2Q8NGL0 311 aa12.11□□□□□ -0.47
SNHG17-208ENST00000456953 OR56A3Q8NH54 315 aa12.11□□□□□ -0.47
SNHG17-208ENST00000456953 OR14A16Q8NHC5 309 aa12.11□□□□□ -0.47
SNHG17-208ENST00000456953 EEF1AKMT1Q8WVE0 214 aa12.11□□□□□ -0.47
SNHG17-208ENST00000456953 SLC5A11Q8WWX8 675 aa12.11□□□□□ -0.47
SNHG17-208ENST00000456953 SREK1Q8WXA9 508 aaKnown RBP12.11□□□□□ -0.47
SNHG17-208ENST00000456953 NEIL2Q969S2 332 aa12.11□□□□□ -0.47
SNHG17-208ENST00000456953 KIAA1191Q96A73 305 aa12.11□□□□□ -0.47
SNHG17-208ENST00000456953 HIST1H2AHQ96KK5 128 aa12.11□□□□□ -0.47
SNHG17-208ENST00000456953 HIST1H2AJQ99878 128 aa12.11□□□□□ -0.47
SNHG17-208ENST00000456953 H2AFJQ9BTM1 129 aa12.11□□□□□ -0.47
SNHG17-208ENST00000456953 NPLQ9BXD5 320 aaPredicted RBP12.11□□□□□ -0.47
SNHG17-208ENST00000456953 SPNS1Q9H2V7 528 aa12.11□□□□□ -0.47
SNHG17-208ENST00000456953 SH2D2AQ9NP31 389 aa12.11□□□□□ -0.47
SNHG17-208ENST00000456953 FBXO6Q9NRD1 293 aaPredicted RBP12.11□□□□□ -0.47
SNHG17-208ENST00000456953 NSMCE4AQ9NXX6 385 aa12.11□□□□□ -0.47
SNHG17-208ENST00000456953 JKAMPQ9P055 326 aa12.11□□□□□ -0.47
SNHG17-208ENST00000456953 IKBKGQ9Y6K9 419 aa12.11□□□□□ -0.47
SNHG17-208ENST00000456953 C15orf38-AP3S2A0A0A6YYH1 394 aa12.1□□□□□ -0.47
SNHG17-208ENST00000456953 EXOC1LA0A1B0GW35 172 aa12.1□□□□□ -0.47
SNHG17-208ENST00000456953 SH3D21A4FU49 640 aa12.1□□□□□ -0.47
SNHG17-208ENST00000456953 FAM159BA6NKW6 160 aa12.1□□□□□ -0.47
SNHG17-208ENST00000456953 RNF212BA8MTL3 300 aa12.1□□□□□ -0.47
SNHG17-208ENST00000456953 CXorf49A8MYA2 514 aaPredicted RBP12.1□□□□□ -0.47
SNHG17-208ENST00000456953 KDM4EB2RXH2 506 aaPredicted RBP12.1□□□□□ -0.47
SNHG17-208ENST00000456953 ZNF354AO60765 605 aaPredicted RBP12.1□□□□□ -0.47
SNHG17-208ENST00000456953 PIAS1O75925 651 aa12.1□□□□□ -0.47
SNHG17-208ENST00000456953 IFNA16P05015 189 aa12.1□□□□□ -0.47
SNHG17-208ENST00000456953 F7P08709 466 aaPredicted RBP12.1□□□□□ -0.47
SNHG17-208ENST00000456953 CTSSP25774 331 aa12.1□□□□□ -0.47
SNHG17-208ENST00000456953 OPRM1P35372 400 aa12.1□□□□□ -0.47
SNHG17-208ENST00000456953 HNRNPFP52597 415 aaKnown RBP12.1□□□□□ -0.47
SNHG17-208ENST00000456953 STXBP1P61764 594 aaKnown RBP12.1□□□□□ -0.47
SNHG17-208ENST00000456953 REEP5Q00765 189 aa12.1□□□□□ -0.47
SNHG17-208ENST00000456953 NAB1Q13506 487 aa12.1□□□□□ -0.47
SNHG17-208ENST00000456953 UAP1Q16222 522 aaPredicted RBP12.1□□□□□ -0.47
SNHG17-208ENST00000456953 MPEG1Q2M385 716 aa12.1□□□□□ -0.47
SNHG17-208ENST00000456953 TOR1AIP1Q5JTV8 583 aa12.1□□□□□ -0.47
SNHG17-208ENST00000456953 ADGRD1Q6QNK2 874 aa12.1□□□□□ -0.47
SNHG17-208ENST00000456953 CNTN4Q8IWV2 1026 aa12.1□□□□□ -0.47
SNHG17-208ENST00000456953 PM20D2Q8IYS1 436 aa12.1□□□□□ -0.47
SNHG17-208ENST00000456953 C2CD4AQ8NCU7 369 aaPredicted RBP12.1□□□□□ -0.47
SNHG17-208ENST00000456953 TMEM52Q8NDY8 209 aa12.1□□□□□ -0.47
SNHG17-208ENST00000456953 PTPMT1Q8WUK0 201 aaPredicted RBP12.1□□□□□ -0.47
SNHG17-208ENST00000456953 MRRFQ96E11 262 aaKnown RBP12.1□□□□□ -0.47
SNHG17-208ENST00000456953 FAR2Q96K12 515 aa12.1□□□□□ -0.47
SNHG17-208ENST00000456953 SECISBP2Q96T21 854 aaKnown RBP12.1□□□□□ -0.47
SNHG17-208ENST00000456953 OR8D2Q9GZM6 311 aa12.1□□□□□ -0.47
SNHG17-208ENST00000456953 EPB41L4BQ9H329 900 aa12.1□□□□□ -0.47
SNHG17-208ENST00000456953 ACSS3Q9H6R3 686 aa12.1□□□□□ -0.47
SNHG17-208ENST00000456953 ARL15Q9NXU5 204 aa12.1□□□□□ -0.47
SNHG17-208ENST00000456953 SLC17A6Q9P2U8 582 aa12.1□□□□□ -0.47
SNHG17-208ENST00000456953 TRMT6Q9UJA5 497 aaKnown RBP12.1□□□□□ -0.47
SNHG17-208ENST00000456953 EIF3LQ9Y262 564 aaKnown RBP12.1□□□□□ -0.47
SNHG17-208ENST00000456953 ANK3Q12955 4377 aaKnown RBP12.1□□□□□ -0.47
SNHG17-208ENST00000456953 PABPN1LA6NDY0 278 aaKnown RBP12.09□□□□□ -0.47
SNHG17-208ENST00000456953 LRRC3CA6NJW4 275 aa12.09□□□□□ -0.47
SNHG17-208ENST00000456953 CD8B2A6NJW9 211 aa12.09□□□□□ -0.47
SNHG17-208ENST00000456953 IL18BPO95998 194 aa12.09□□□□□ -0.47
SNHG17-208ENST00000456953 INHBAP08476 426 aa12.09□□□□□ -0.47
SNHG17-208ENST00000456953 TRPC1P48995 793 aa12.09□□□□□ -0.47
SNHG17-208ENST00000456953 AP1S2P56377 157 aa12.09□□□□□ -0.47
SNHG17-208ENST00000456953 RAB38P57729 211 aa12.09□□□□□ -0.47
SNHG17-208ENST00000456953 CRYZQ08257 329 aaKnown RBP12.09□□□□□ -0.47
SNHG17-208ENST00000456953 IFFO1Q0D2I5 559 aa12.09□□□□□ -0.47
SNHG17-208ENST00000456953 RUNX2Q13950 521 aa12.09□□□□□ -0.47
SNHG17-208ENST00000456953 EFTUD2Q15029 972 aaKnown RBP eCLIP12.09□□□□□ -0.478e-7■■■■□ 21.2
SNHG17-208ENST00000456953 ZNF791Q3KP31 576 aaPredicted RBP12.09□□□□□ -0.47
SNHG17-208ENST00000456953 UGT3A1Q6NUS8 523 aa12.09□□□□□ -0.47
SNHG17-208ENST00000456953 CLNKQ7Z7G1 428 aa12.09□□□□□ -0.47
SNHG17-208ENST00000456953 MYO1HQ8N1T3 1032 aa12.09□□□□□ -0.47
SNHG17-208ENST00000456953 MREGQ8N565 214 aa12.09□□□□□ -0.47
SNHG17-208ENST00000456953 ZNF321PQ8N8H1 164 aa12.09□□□□□ -0.47
SNHG17-208ENST00000456953 FAM47BQ8NA70 645 aa12.09□□□□□ -0.47
SNHG17-208ENST00000456953 PAQR8Q8TEZ7 354 aa12.09□□□□□ -0.47
SNHG17-208ENST00000456953 ATL1Q8WXF7 558 aa12.09□□□□□ -0.47
SNHG17-208ENST00000456953 GAL3ST3Q96A11 431 aa12.09□□□□□ -0.47
SNHG17-208ENST00000456953 TSNARE1Q96NA8 513 aa12.09□□□□□ -0.47
SNHG17-208ENST00000456953 TIMP4Q99727 224 aa12.09□□□□□ -0.47
SNHG17-208ENST00000456953 CPNE1Q99829 537 aa12.09□□□□□ -0.47
SNHG17-208ENST00000456953 AIF1LQ9BQI0 150 aa12.09□□□□□ -0.47
SNHG17-208ENST00000456953 FUT8Q9BYC5 575 aa12.09□□□□□ -0.47
SNHG17-208ENST00000456953 AICDAQ9GZX7 198 aa12.09□□□□□ -0.47
SNHG17-208ENST00000456953 PELI2Q9HAT8 420 aa12.09□□□□□ -0.47
SNHG17-208ENST00000456953 SMYD2Q9NRG4 433 aa12.09□□□□□ -0.47
SNHG17-208ENST00000456953 VTI1BQ9UEU0 232 aa12.09□□□□□ -0.47
SNHG17-208ENST00000456953 NCKAP5O14513 1909 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms